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scnpilot_expt_750_bf_scaffold_3541

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_3541_1
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..1343
DNA (1341bp) protein (447aa)
Peptidase n=1 Tax=Rhodanobacter denitrificans RepID=I4WM13_9GAMM
Insulinase {ECO:0000313|EMBL:EIL95719.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
putative Zn-dependent peptidase
scnpilot_expt_750_bf_scaffold_3541_2
unknown

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1453..1866
DNA (414bp) protein (138aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_3541_3
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1918..2385)
DNA (468bp) protein (156aa)
ferritin n=1 Tax=Dyella ginsengisoli RepID=UPI000347B45B
Ferritin, Dps family protein {ECO:0000313|EMBL:EIL97073.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobac
DNA-binding ferritin-like protein (oxidative damage protectant)
scnpilot_expt_750_bf_scaffold_3541_4
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2525..5323
DNA (2799bp) protein (933aa)
ATP-dependent RNA helicase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WC83_9GAMM rbh
DEAD/DEAH box helicase {ECO:0000313|EMBL:AHX14483.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;
DEAD/DEAH box helicase
scnpilot_expt_750_bf_scaffold_3541_5
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5275..7167
DNA (1893bp) protein (631aa)
ATP-dependent RNA helicase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WC84_9GAMM
ATP-dependent RNA helicase {ECO:0000313|EMBL:EIL97075.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacte
DEAD/DEAH box helicase
scnpilot_expt_750_bf_scaffold_3541_6
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7244..7753)
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WC85_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL97076.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
hypothetical protein
scnpilot_expt_750_bf_scaffold_3541_7
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7964..8698
DNA (735bp) protein (245aa)
Putative DNA-binding protein n=1 Tax=Stenotrophomonas maltophilia EPM1 RepID=M3G773_STEMA rbh
Helix-turn-helix domain protein {ECO:0000313|EMBL:CCP11493.1}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomon
DNA-binding protein
scnpilot_expt_750_bf_scaffold_3541_8
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8969..10375
DNA (1407bp) protein (469aa)
Aldehyde dehydrogenase family protein {ECO:0000313|EMBL:CCP16393.1}; EC=1.2.1.- {ECO:0000313|EMBL:CCP16393.1};; TaxID=1118157 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; X
succinate dehydrogenase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002E942CF rbh
aldehyde dehydrogenase
scnpilot_expt_750_bf_scaffold_3541_9
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10413..12056
DNA (1644bp) protein (548aa)
Acetolactate synthase I/II/III large subunit {ECO:0000313|EMBL:CCP11497.1}; EC=2.2.1.6 {ECO:0000313|EMBL:CCP11497.1};; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonad
acetolactate synthase (EC:2.2.1.6)
Acetolactate synthase I/II/III large subunit n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CMI9_STEMA rbh
scnpilot_expt_750_bf_scaffold_3541_10
unknown

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comp(12081..12296)
DNA (216bp) protein (72aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_3541_11
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12304..12783)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WSA8_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIM02350.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter t
scnpilot_expt_750_bf_scaffold_3541_12
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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12901..15030
DNA (2130bp) protein (710aa)
RelA/SpoT family (P)ppGpp synthetase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WC86_9GAMM
RelA/SpoT family (P)ppGpp synthetase {ECO:0000313|EMBL:EIL97077.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rh
(p)ppGpp synthetase, RelA/SpoT family
scnpilot_expt_750_bf_scaffold_3541_13
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15100..16806
DNA (1707bp) protein (569aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NH60_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90239.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter de
scnpilot_expt_750_bf_scaffold_3541_14
unknown

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16814..16885
DNA (72bp) protein (24aa)

This feature has no annotations

Displaying 14 items

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