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scnpilot_expt_750_bf_scaffold_2100

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_2100_1
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..255)
DNA (255bp) protein (85aa)
type II secretion system protein F n=1 Tax=Acidovorax avenae RepID=UPI00031EB654
type II secretion system protein
Type II secretion system protein {ECO:0000313|EMBL:ABM34700.1}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ci
scnpilot_expt_750_bf_scaffold_2100_2
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(296..2044)
DNA (1749bp) protein (583aa)
General secretory pathway protein E n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q490_ACIAP
general secretory pathway protein E
General secretory pathway protein E {ECO:0000313|EMBL:ADX47920.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax
scnpilot_expt_750_bf_scaffold_2100_3
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2152..3339)
DNA (1188bp) protein (396aa)
Acyltransferase 3 n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DRS8_PSEMN rbh
acyltransferase 3
Acyltransferase 3 {ECO:0000313|EMBL:AEB60798.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (
scnpilot_expt_750_bf_scaffold_2100_4
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3336..4139)
DNA (804bp) protein (268aa)
glycosyl transferase n=1 Tax=Comamonas sp. B-9 RepID=UPI0003956D9C
glycosyl transferase family protein
Glycosyl transferase, family 2 {ECO:0000313|EMBL:ABM56998.1}; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="Verminep
scnpilot_expt_750_bf_scaffold_2100_5
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4161..4718)
DNA (558bp) protein (186aa)
dTDP-L-rhamnose synthetase n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XYW5_RAMTT
rfbC; dTDP-L-rhamnose synthetase
dTDP-L-rhamnose synthetase {ECO:0000313|EMBL:AEG91953.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataou
scnpilot_expt_750_bf_scaffold_2100_6
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4752..5345)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Escherichia coli UMEA 3317-1 RepID=T9JDP6_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:GAL57510.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia v
acetyltransferase, including N-acetylase of ribosomal protein
scnpilot_expt_750_bf_scaffold_2100_7
Pseudomonas syringae group genomosp. 3, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5330..7012)
DNA (1683bp) protein (561aa)
Membrane protein, putative n=1 Tax=Pseudomonas syringae pv. tomato (strain DC3000) RepID=Q87YR2_PSESM
membrane protein
Membrane protein, putative {ECO:0000313|EMBL:AAO57199.1}; TaxID=223283 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas syr
scnpilot_expt_750_bf_scaffold_2100_8
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7514..7975)
DNA (462bp) protein (154aa)
WxcM domain protein, C-terminal domain protein n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WFR7_VEREI
WxcM domain-containing protein
WxcM domain protein, C-terminal domain protein {ECO:0000313|EMBL:ABM56474.1}; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;"
scnpilot_expt_750_bf_scaffold_2100_9
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7985..8917)
DNA (933bp) protein (311aa)
Glycosyl transferase, family 2 n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WFR8_VEREI rbh
glycosyl transferase family protein
Glycosyl transferase, family 2 {ECO:0000313|EMBL:ABM56475.1}; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="Verminep
scnpilot_expt_750_bf_scaffold_2100_10
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8921..9955)
DNA (1035bp) protein (345aa)
DegT/DnrJ/EryC1/StrS aminotransferase n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WFR9_VEREI rbh
DegT/DnrJ/EryC1/StrS aminotransferase
DegT/DnrJ/EryC1/StrS aminotransferase {ECO:0000313|EMBL:ABM56476.1}; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="V
scnpilot_expt_750_bf_scaffold_2100_11
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9957..10856)
DNA (900bp) protein (300aa)
glucose-1-phosphate thymidylyltransferase; K00973 glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
glucose-1-phosphate thymidylyltransferase n=1 Tax=Variovorax paradoxus RepID=UPI000374F6C8
dTDP-glucose pyrophosphorylase
scnpilot_expt_750_bf_scaffold_2100_12
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10853..11761)
DNA (909bp) protein (303aa)
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:ABM38787.1}; EC=1.1.1.133 {ECO:0000313|EMBL:ABM38787.1};; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamo
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI00036EA475 rbh
scnpilot_expt_750_bf_scaffold_2100_13
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11758..12396)
DNA (639bp) protein (213aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamon
dTDP-glucose 4,6-dehydratase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T1C6_ACIDE
dtdp-glucose 4,6-dehydratase
Displaying 13 items

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