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scnpilot_expt_750_bf_scaffold_2244

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_2244_1
unknown

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comp(1..486)
DNA (486bp) protein (162aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_2244_2
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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647..1291
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NZZ3_9BRAD
TPR domain-containing protein {ECO:0000313|EMBL:EGP06148.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium
hypothetical protein
scnpilot_expt_750_bf_scaffold_2244_3
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1322..3148
DNA (1827bp) protein (609aa)
GTP-binding protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000377261B
GTP-binding protein typa {ECO:0000313|EMBL:GAD21940.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7
GTP-binding protein TypA
scnpilot_expt_750_bf_scaffold_2244_4
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3209..4111
DNA (903bp) protein (301aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI00037FD71D
transporter
Candidate transporter {ECO:0000313|EMBL:AEG93055.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinens
scnpilot_expt_750_bf_scaffold_2244_5
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4230..4709)
DNA (480bp) protein (160aa)
SsrA-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI00037B3432
smpB; SsrA-binding protein; K03664 SsrA-binding protein Tax=CG_Rhodof_02
smpB; ssra-binding protein
scnpilot_expt_750_bf_scaffold_2244_6
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4793..5245
DNA (453bp) protein (151aa)
Cyclase/dehydrase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BV98_9BURK
hypothetical protein Tax=GWA2_Curvibacter_64_110_curated
cyclase/dehydrase
scnpilot_expt_750_bf_scaffold_2244_7
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5242..5631
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XXS5_RAMTT
hypothetical protein
UPF0125 protein Rta_19680 {ECO:0000256|HAMAP-Rule:MF_00460}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tat
scnpilot_expt_750_bf_scaffold_2244_8
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5745..6266)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XXS6_RAMTT
Membrane protein {ECO:0000313|EMBL:KJA09515.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_2244_9
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6451..7839
DNA (1389bp) protein (463aa)
inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VNT2_POLNA
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:
scnpilot_expt_750_bf_scaffold_2244_10
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8172..9530
DNA (1359bp) protein (453aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T3Q0_ACIDE
guaA; GMP synthase
scnpilot_expt_750_bf_scaffold_2244_11
Xanthomonas gardneri, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9832..11088
DNA (1257bp) protein (419aa)
Integrase n=1 Tax=Xanthomonas gardneri ATCC 19865 RepID=F0C7J4_9XANT rbh
Integrase {ECO:0000313|EMBL:EGD18489.1}; TaxID=925777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas gardneri ATCC 19865.
integrase family protein
scnpilot_expt_750_bf_scaffold_2244_12
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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11244..12065
DNA (822bp) protein (274aa)
Putative uncharacterized protein n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TSI5_ACIAC rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM33923.1}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (s
scnpilot_expt_750_bf_scaffold_2244_13
Xanthomonas citri, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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12049..12996
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Xanthomonas citri pv. mangiferaeindicae LMG 941 RepID=H8FI94_XANCI rbh
Uncharacterized protein {ECO:0000313|EMBL:CCG38081.1}; TaxID=1156940 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas citri
Nucleotidyl transferase of unknown function (DUF1814)
scnpilot_expt_750_bf_scaffold_2244_14
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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13031..13279
DNA (249bp) protein (83aa)
hypothetical protein n=1 Tax=Xanthomonas arboricola RepID=UPI00037C7314
hypothetical protein
Prophage CP4-57 regulatory {ECO:0000313|EMBL:AGH77666.1}; TaxID=1304892 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas ax
scnpilot_expt_750_bf_scaffold_2244_15
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13304..13609)
DNA (306bp) protein (102aa)
transcriptional regulator n=1 Tax=Xanthomonas arboricola RepID=UPI00036BAE48
phage transcriptional regulator AlpA
Phage transcriptional regulator, AlpA {ECO:0000313|EMBL:ABM33920.1}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovor
Displaying 15 items

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