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scnpilot_expt_750_bf_scaffold_1174

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_1174_1
unknown

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3..647
DNA (645bp) protein (215aa)
Limonene-1,2-epoxide hydrolase catalytic domain family n=21 Tax=Burkholderia pseudomallei RepID=Q3JI01_BURP1
limonene-1,2-epoxide hydrolase catalytic domain-contain protein
scnpilot_expt_750_bf_scaffold_1174_2
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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635..1429
DNA (795bp) protein (265aa)
fatty-acid--CoA ligase n=1 Tax=Curvibacter lanceolatus RepID=UPI00036B2ADE
AMP-forming long-chain acyl-CoA synthetase {ECO:0000313|EMBL:EJE48391.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Ac
AMP-dependent synthetase and ligase
scnpilot_expt_750_bf_scaffold_1174_3
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1473..2636
DNA (1164bp) protein (388aa)
ABC-type branched-chain amino acid transport system, periplasmic component n=1 Tax=Variovorax sp. CF313 RepID=J3CUU9_9BURK
ABC-type branched-chain amino acid transport system, periplasmic component {ECO:0000313|EMBL:EJL78974.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkho
putative ABC transporter, branched-chain amino acid-binding protein
scnpilot_expt_750_bf_scaffold_1174_4
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2690..3865
DNA (1176bp) protein (392aa)
ABC-type branched-chain amino acid transport system, periplasmic component n=1 Tax=Variovorax sp. CF313 RepID=J3CUU9_9BURK
ABC-type branched-chain amino acid transport system, periplasmic component {ECO:0000313|EMBL:EJL78974.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkho
putative ABC transporter, branched-chain amino acid-binding protein
scnpilot_expt_750_bf_scaffold_1174_5
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4025..4231)
DNA (207bp) protein (69aa)
Glutathione S-transferase {ECO:0000313|EMBL:GAO54224.1}; EC=2.5.1.18 {ECO:0000313|EMBL:GAO54224.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomona
Glutathione S-transferase domain protein n=1 Tax=Burkholderia sp. YI23 RepID=G8MJM4_9BURK
glutathione S-transferase domain protein
scnpilot_expt_750_bf_scaffold_1174_6
bacterium YEK0313, Bacteria

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comp(4173..4703)
DNA (531bp) protein (177aa)
Glutathione S-transferase-like n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q212D9_RHOPB
Glutathione S-transferase GST-6.0 {ECO:0000313|EMBL:CEJ11482.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
glutathione S-transferase-like protein
scnpilot_expt_750_bf_scaffold_1174_7
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4714..6303)
DNA (1590bp) protein (530aa)
Long-chain-fatty-acid--CoA ligase n=1 Tax=Comamonas testosteroni ATCC 11996 RepID=H1RW78_COMTE rbh
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:EHN63425.1}; TaxID=1009852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas te
long-chain-fatty-acid--CoA ligase
scnpilot_expt_750_bf_scaffold_1174_8
Gordonia neofelifaecis, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(6356..7912)
DNA (1557bp) protein (519aa)
O-succinylbenzoate-CoA ligase n=1 Tax=Gordonia neofelifaecis NRRL B-59395 RepID=F1YEE5_9ACTO rbh
O-succinylbenzoate-CoA ligase {ECO:0000313|EMBL:EGD56778.1}; TaxID=644548 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia neofelifaecis NRRL B-59395.;"
AMP-dependent synthetase and ligase
scnpilot_expt_750_bf_scaffold_1174_9
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7964..9127)
DNA (1164bp) protein (388aa)
AcyL-CoA dehydrogenase domain-containing protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BT30_9BURK rbh
acyL-CoA dehydrogenase domain-containing protein Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
acyl-CoA dehydrogenase-like protein
scnpilot_expt_750_bf_scaffold_1174_10
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9137..11029)
DNA (1893bp) protein (631aa)
Acetyl/propionyl-CoA carboxylase, alpha subunit n=1 Tax=Acidovorax sp. CF316 RepID=J0KCX4_9BURK
Acetyl/propionyl-CoA carboxylase, alpha subunit {ECO:0000313|EMBL:EJE48993.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae;
carbamoyl-phosphate synthase ATP-binding subunit L
scnpilot_expt_750_bf_scaffold_1174_11
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(11214..12383)
DNA (1170bp) protein (390aa)
Acyl-CoA dehydrogenase domain protein n=1 Tax=Comamonas testosteroni ATCC 11996 RepID=H1RW85_COMTE rbh
acyl-CoA dehydrogenase-like protein
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:EHN63432.1}; TaxID=1009852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamona
scnpilot_expt_750_bf_scaffold_1174_12
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12624..14261)
DNA (1638bp) protein (546aa)
Carboxyl transferase n=1 Tax=Comamonas testosteroni S44 RepID=D8DC22_COMTE
3-methylcrotonyl-CoA carboxylase subunit beta {ECO:0000313|EMBL:KGH08149.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Coma
carboxyl transferase
scnpilot_expt_750_bf_scaffold_1174_13
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14375..15025)
DNA (651bp) protein (217aa)
Transcriptional regulator, TetR family n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WZY0_COMTE
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EED68202.1}; TaxID=399795 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamona
scnpilot_expt_750_bf_scaffold_1174_14
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(15167..15724)
DNA (558bp) protein (186aa)
Adenine phosphoribosyltransferase {ECO:0000255|HAMAP-Rule:MF_00004}; Short=APRT {ECO:0000255|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000255|HAMAP-Rule:MF_00004};; TaxID=535289 species="Bacteria; Prote
Adenine phosphoribosyltransferase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=APT_ACIET
adenine phosphoribosyltransferase
scnpilot_expt_750_bf_scaffold_1174_15
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15746..17731)
DNA (1986bp) protein (662aa)
Candidate membrane component of K+ transport systems, Kef type n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y353_RAMTT
membrane component of K+ transport systems, Kef type
Candidate membrane component of K+ transport systems, Kef type {ECO:0000313|EMBL:AEG94933.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramli
scnpilot_expt_750_bf_scaffold_1174_16
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17767..18744
DNA (978bp) protein (326aa)
Candidate Arabinose 5-phosphate isomerase n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y352_RAMTT rbh
kdsD; Arabinose 5-phosphate isomerase
Candidate Arabinose 5-phosphate isomerase {ECO:0000313|EMBL:AEG94932.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ram
scnpilot_expt_750_bf_scaffold_1174_17
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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18744..19313
DNA (570bp) protein (190aa)
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; K03270 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] Tax=GWE1_Burkholderiales_65_30_curated
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family id=1293894 bin=GWE1_Burkholderiales_65_30 species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase
scnpilot_expt_750_bf_scaffold_1174_18
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19310..19927
DNA (618bp) protein (206aa)
Candidate 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y351_RAMTT
kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase
Candidate 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase {ECO:0000313|EMBL:AEG94931.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramli
scnpilot_expt_750_bf_scaffold_1174_19
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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19946..20737
DNA (792bp) protein (264aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T870_ACIDE
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EER59334.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidov
short chain dehydrogenase
scnpilot_expt_750_bf_scaffold_1174_20
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20813..21130)
DNA (318bp) protein (106aa)
RNA-binding protein n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI000308ED7A
RNA-binding protein {ECO:0000313|EMBL:KJA11688.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
RNP-1 like RNA-binding protein
scnpilot_expt_750_bf_scaffold_1174_21
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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21518..22015
DNA (498bp) protein (166aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TYT1_ALIDB
hypothetical protein
Transmembrane protein {ECO:0000313|EMBL:GAO25688.1}; Transmembrane protein PFT27 {ECO:0000313|EMBL:GAO21088.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Co
Displaying 21 items

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