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scnpilot_expt_750_bf_scaffold_1323

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_1323_1
RIFOXYC12_FULL_Burkholderiales_65_23_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..873
DNA (873bp) protein (291aa)
(dimethylallyl)adenosine tRNA methylthiotransferase n=1 Tax=Brachymonas chironomi RepID=UPI00036E11E5
(dimethylallyl)adenosine tRNA methylthiotransferase; K06168 bifunctional enzyme involved in thiolation and methylation of tRNA Tax=RIFOXYC12_FULL_Burkholderiales_65_23_curated
(dimethylallyl)adenosine tRNA methylthiotransferase
scnpilot_expt_750_bf_scaffold_1323_2
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1041..2585
DNA (1545bp) protein (515aa)
ABC transporter related protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TRM2_ALIDB
ABC transporter
Sugar ATP binding protein {ECO:0000313|EMBL:GAO27258.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus
scnpilot_expt_750_bf_scaffold_1323_3
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2572..3579
DNA (1008bp) protein (336aa)
sugar ABC transporter permease n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000373ABBA
ABC transporter permease {ECO:0000313|EMBL:GAD20844.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7
inner-membrane translocator
scnpilot_expt_750_bf_scaffold_1323_4
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3579..4433
DNA (855bp) protein (285aa)
Inner-membrane translocator n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T7E8_ACIDE
ABC transporter permease {ECO:0000313|EMBL:KJA10191.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;
ABC transporter permease
scnpilot_expt_750_bf_scaffold_1323_5
unknown

Not on your lists

4433..4609
DNA (177bp) protein (59aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_1323_6
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4656..5813
DNA (1158bp) protein (386aa)
membrane protein n=1 Tax=Curvibacter lanceolatus RepID=UPI00036E9DB6
basic membrane lipoprotein
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
scnpilot_expt_750_bf_scaffold_1323_7
Aquabacterium sp. NJ1, Aquabacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6216..6878)
DNA (663bp) protein (221aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI000377082F
DSBA oxidoreductase {ECO:0000313|EMBL:KGM40078.1}; TaxID=1538295 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Aquabacterium.;" source="Aquabacterium sp. NJ1.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_1323_8
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7041..8195)
DNA (1155bp) protein (385aa)
alpha/beta hydrolase n=2 Tax=Acidovorax sp. MR-S7 RepID=UPI00036FB283 rbh
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:GAD23873.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax
alpha/beta hydrolase fold protein
scnpilot_expt_750_bf_scaffold_1323_9
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8472..8870
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI00037686AC
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_1323_10
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8955..9935)
DNA (981bp) protein (327aa)
quinone oxidoreductase n=1 Tax=Comamonas sp. B-9 RepID=UPI000395CEEE rbh
alcohol dehydrogenase
Alcohol dehydrogenase, zinc-binding domain protein {ECO:0000313|EMBL:ABM34025.1}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" sou
scnpilot_expt_750_bf_scaffold_1323_11
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10026..10925
DNA (900bp) protein (300aa)
DMT(Drug/metabolite transporter) superfamily permease n=1 Tax=Polaromonas sp. CF318 RepID=J3DDG2_9BURK
DMT(Drug/metabolite transporter) superfamily permease {ECO:0000313|EMBL:EJL89686.1}; Flags: Precursor;; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonada
hypothetical protein
scnpilot_expt_750_bf_scaffold_1323_12
Methyloglobulus morosus, Methyloglobulus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10981..11499
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Methyloglobulus morosus KoM1 RepID=V5C1F3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ESS72307.1}; TaxID=1116472 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methyloglobulus.;" source="Methyloglobul
hypothetical protein
scnpilot_expt_750_bf_scaffold_1323_13
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11500..12927)
DNA (1428bp) protein (476aa)
bifunctional enoyl-CoA hydratase/phosphate acetyltransferase (EC:2.3.1.19); K00625 phosphate acetyltransferase [EC:2.3.1.8] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
bifunctional enoyl-CoA hydratase/phosphate acetyltransferase n=1 Tax=Rhodocyclaceae bacterium RZ94 RepID=UPI00036B7B5F
phosphotransacetylase
scnpilot_expt_750_bf_scaffold_1323_14
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12967..13764)
DNA (798bp) protein (266aa)
short-chain dehydrogenase/reductase SDR; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
Short-chain dehydrogenase/reductase SDR n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21TJ9_RHOFD
short-chain dehydrogenase/reductase SDR
scnpilot_expt_750_bf_scaffold_1323_15
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13895..14761)
DNA (867bp) protein (289aa)
Putative uncharacterized protein n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0QBB1_ACIAP
Multidrug DMT transporter permease {ECO:0000313|EMBL:KJA11828.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax t
hypothetical protein
scnpilot_expt_750_bf_scaffold_1323_16
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14794..16149)
DNA (1356bp) protein (452aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2X0X9_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD43805.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
hypothetical protein
scnpilot_expt_750_bf_scaffold_1323_17
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16237..17748)
DNA (1512bp) protein (504aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HZ32_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU45015.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.
scnpilot_expt_750_bf_scaffold_1323_18
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17768..18256)
DNA (489bp) protein (163aa)
Tripartite tricarboxylate transporter TctB family n=1 Tax=Variovorax sp. CF313 RepID=J2T3Q2_9BURK
Tripartite tricarboxylate transporter TctB family {ECO:0000313|EMBL:EJL72642.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae
hypothetical protein
scnpilot_expt_750_bf_scaffold_1323_19
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18473..20230)
DNA (1758bp) protein (586aa)
Type IV pilus assembly protein tapB-like protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XXH0_RAMTT
type IV pilus assembly protein tapB
Type IV pilus assembly protein tapB-like protein {ECO:0000313|EMBL:AEG94305.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" sour
scnpilot_expt_750_bf_scaffold_1323_20
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20227..20982)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V0F5_VARPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU35559.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (
scnpilot_expt_750_bf_scaffold_1323_21
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21169..21993
DNA (825bp) protein (275aa)
MscS Mechanosensitive ion channel n=2 Tax=Alicycliphilus denitrificans RepID=E8TRD5_ALIDB rbh
mechanosensitive ion channel protein MscS
MscS Mechanosensitive ion channel {ECO:0000313|EMBL:AEB82504.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycli
scnpilot_expt_750_bf_scaffold_1323_22
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22090..23454)
DNA (1365bp) protein (455aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|SAAS:SAAS00078319}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|SAAS:SAAS00078300};; TaxID=1268622 species="Bacter
phosphoglucosamine mutase (EC:5.4.2.10)
phosphoglucosamine mutase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003662D70 rbh
scnpilot_expt_750_bf_scaffold_1323_23
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23525..24373)
DNA (849bp) protein (283aa)
Dihydropteroate synthase {ECO:0000256|RuleBase:RU361205}; Short=DHPS {ECO:0000256|RuleBase:RU361205};; EC=2.5.1.15 {ECO:0000256|RuleBase:RU361205};; Dihydropteroate pyrophosphorylase {ECO:0000256|Rule
dihydropteroate synthase (EC:2.5.1.15)
dihydropteroate synthase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003656882
scnpilot_expt_750_bf_scaffold_1323_24
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24516..25103)
DNA (588bp) protein (196aa)
FtsH peptidase (EC:3.6.4.6)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholde
ATP-dependent zinc metalloprotease FtsH n=2 Tax=Acidovorax RepID=A1W8G9_ACISJ
Displaying 24 items

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