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scnpilot_expt_750_bf_scaffold_1331

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_1331_1
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3..410)
DNA (408bp) protein (136aa)
peptidase M20 n=1 Tax=Curvibacter lanceolatus RepID=UPI00036E5D02
Acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase {ECO:0000313|EMBL:EER57817.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae
acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase
scnpilot_expt_750_bf_scaffold_1331_2
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(407..2176)
DNA (1770bp) protein (590aa)
hydantoinase/carbamoylase family amidase (EC:3.5.1.87)
Amidase, hydantoinase/carbamoylase family {ECO:0000313|EMBL:ADX45029.1}; EC=3.5.1.87 {ECO:0000313|EMBL:ADX45029.1};; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales
peptidase M20 n=1 Tax=Acidovorax avenae RepID=UPI000314AE5E
scnpilot_expt_750_bf_scaffold_1331_3
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2402..3073)
DNA (672bp) protein (224aa)
Urate catabolism protein {ECO:0000313|EMBL:ADX45030.1}; EC=3.5.1.41 {ECO:0000313|EMBL:ADX45030.1};; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae;
Polysaccharide deacetylase n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TL68_ACIAC
polysaccharide deacetylase
scnpilot_expt_750_bf_scaffold_1331_4
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3094..3762)
DNA (669bp) protein (223aa)
GntR family transcriptional regulator n=1 Tax=Acidovorax radicis RepID=UPI00023769DB
Transcriptional regulator {ECO:0000313|EMBL:EJE54983.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF31
GntR family transcriptional regulator
scnpilot_expt_750_bf_scaffold_1331_5
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3845..4195
DNA (351bp) protein (117aa)
5-hydroxyisourate hydrolase {ECO:0000256|RuleBase:RU361270}; Short=HIU hydrolase {ECO:0000256|RuleBase:RU361270};; Short=HIUHase {ECO:0000256|RuleBase:RU361270};; EC=3.5.2.17 {ECO:0000256|RuleBase:RU3
5-hydroxyisourate hydrolase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HVF6_9BURK
hydroxyisourate hydrolase
scnpilot_expt_750_bf_scaffold_1331_6
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4330..4872)
DNA (543bp) protein (181aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI00023769D9
Putative uncharacterized protein {ECO:0000313|EMBL:EHL22512.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp
hypothetical protein
scnpilot_expt_750_bf_scaffold_1331_7
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4887..5714
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I0V9_9BURK
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_1331_8
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5899..7131
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5TB76_ACIDE
Uncharacterized protein {ECO:0000313|EMBL:EER58269.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii
hypothetical protein
scnpilot_expt_750_bf_scaffold_1331_9
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7140..7811)
DNA (672bp) protein (224aa)
TetR family transcriptional regulator; K03577 TetR/AcrR family transcriptional regulator, acrAB operon repressor Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
acrR; transcriptional regulator AcrR; K03577 TetR/AcrR family transcriptional regulator, acrAB operon repressor id=12551458 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
TetR family transcriptional regulator
scnpilot_expt_750_bf_scaffold_1331_10
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7980..9233
DNA (1254bp) protein (418aa)
Secretion protein HlyD n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12BX7_POLSJ
RND family efflux transporter mfp subunit; K03585 membrane fusion protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
secretion protein HlyD
scnpilot_expt_750_bf_scaffold_1331_11
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9243..11972
DNA (2730bp) protein (910aa)
Hydrophobe/amphiphile efflux-1 HAE1 protein id=1262275 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
hydrophobe/amphiphile efflux-1 (HAE1) family protein Tax=GWE1_Burkholderiales_65_30_curated
hydrophobe/amphiphile efflux-1 (HAE1) family protein
scnpilot_expt_750_bf_scaffold_1331_12
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11858..12967)
DNA (1110bp) protein (370aa)
Oxidoreductase alpha (Molybdopterin) subunit n=1 Tax=Sphingopyxis sp. MC1 RepID=N9USJ5_9SPHN
Oxidoreductase alpha (Molybdopterin) subunit {ECO:0000313|EMBL:ENY81284.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" s
formate dehydrogenase oxidoreductase protein
Displaying 12 items

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