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scnpilot_expt_750_bf_scaffold_1402

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_1402_1
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..956
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VMR2_POLNA
hypothetical protein
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
scnpilot_expt_750_bf_scaffold_1402_2
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1092..1646
DNA (555bp) protein (185aa)
Elongation factor P n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MGX1_9BURK rbh
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadacea
translation elongation factor P
scnpilot_expt_750_bf_scaffold_1402_3
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1743..2615
DNA (873bp) protein (291aa)
TIGR00730 family protein n=1 Tax=Acidovorax sp. CF316 RepID=J0U2N9_9BURK
hypothetical protein
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
scnpilot_expt_750_bf_scaffold_1402_4
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2638..3291)
DNA (654bp) protein (218aa)
Outer-membrane lipoprotein carrier protein n=1 Tax=Variovorax sp. CF313 RepID=J2KYJ0_9BURK
Outer-membrane lipoprotein carrier protein {ECO:0000256|HAMAP-Rule:MF_00240, ECO:0000256|SAAS:SAAS00028972}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Bur
outer membrane lipoprotein carrier protein LolA
scnpilot_expt_750_bf_scaffold_1402_5
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3360..4007)
DNA (648bp) protein (216aa)
peptidyl-tRNA hydrolase (EC:3.1.1.29); K01056 peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y785_9BURK
scnpilot_expt_750_bf_scaffold_1402_6
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(4106..4441)
DNA (336bp) protein (112aa)
50S ribosomal protein L25 n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI00023768B3
50S ribosomal protein L25/general stress protein Ctc
50S ribosomal protein L25 {ECO:0000255|HAMAP-Rule:MF_01334}; General stress protein CTC {ECO:0000255|HAMAP-Rule:MF_01334}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholde
scnpilot_expt_750_bf_scaffold_1402_7
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4759..5736)
DNA (978bp) protein (326aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1) Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T373_ACIDE
scnpilot_expt_750_bf_scaffold_1402_trna_1
unknown

Not on your lists

comp(5826..5899)
DNA (74bp)
transferRNA
scnpilot_expt_750_bf_scaffold_1402_8
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5939..6727)
DNA (789bp) protein (263aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2C-methyl-D-erythritol kinase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003604DBD
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
scnpilot_expt_750_bf_scaffold_1402_9
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6739..7188)
DNA (450bp) protein (150aa)
Putative lipoprotein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VKP0_POLNA
putative lipoprotein
Outer-membrane lipoprotein LolB {ECO:0000256|SAAS:SAAS00002103}; Flags: Precursor;; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;"
scnpilot_expt_750_bf_scaffold_1402_10
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7233..9017)
DNA (1785bp) protein (595aa)
Uncharacterized protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XYS1_RAMTT
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_1402_11
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9050..9865
DNA (816bp) protein (272aa)
Formamidopyrimidine-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103, ECO:0000256|SAAS:SAAS00020852}; Short=Fapy-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000256|HAMAP-Rule
Formamidopyrimidine-DNA glycosylase n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XYS0_RAMTT rbh
mutM; formamidopyrimidine-DNA glycosylase
scnpilot_expt_750_bf_scaffold_1402_12
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9962..11926
DNA (1965bp) protein (655aa)
Uncharacterized protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XYR9_RAMTT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG94436.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouine
scnpilot_expt_750_bf_scaffold_1402_13
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11923..12966
DNA (1044bp) protein (348aa)
mutY; A/G-specific adenine glycosylase MutY (EC:3.2.2.-)
A/G-specific adenine glycosylase MutY {ECO:0000313|EMBL:AGU51578.1}; EC=3.2.2.- {ECO:0000313|EMBL:AGU51578.1};; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Co
A/G-specific adenine glycosylase MutY n=1 Tax=Variovorax paradoxus B4 RepID=T1XGC0_VARPD
scnpilot_expt_750_bf_scaffold_1402_14
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13061..14329)
DNA (1269bp) protein (423aa)
UPF0761 membrane protein Veis_3782 n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=Y3782_VEREI
putative ribonuclease BN
UPF0761 membrane protein Veis_3782 {ECO:0000255|HAMAP-Rule:MF_00672}; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="
scnpilot_expt_750_bf_scaffold_1402_15
CG_Rhodof_03, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14352..14723
DNA (372bp) protein (124aa)
membrane protein n=1 Tax=Comamonas sp. B-9 RepID=UPI0003956D24
membrane protein Tax=CG_Rhodof_03
hypothetical protein
scnpilot_expt_750_bf_scaffold_1402_16
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14786..16213
DNA (1428bp) protein (476aa)
FAD linked oxidase-like protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
Fad linked oxidase domain-containing protein id=1262669 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
fad linked oxidase domain-containing protein
scnpilot_expt_750_bf_scaffold_1402_17
unknown

Not on your lists

comp(16223..16297)
DNA (75bp) protein (25aa)

This feature has no annotations

Displaying 18 items

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