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scnpilot_expt_750_bf_scaffold_8615

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_8615_1
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3..224)
DNA (222bp) protein (74aa)
hypothetical protein n=1 Tax=Thiothrix flexilis RepID=UPI000368700B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM33571.1}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (s
scnpilot_expt_750_bf_scaffold_8615_2
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(326..925)
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XX24_RAMTT
Isochorismatase {ECO:0000313|EMBL:KJA12341.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_8615_trna_1
unknown

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comp(1017..1088)
DNA (72bp)
transferRNA
scnpilot_expt_750_bf_scaffold_8615_3
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1115..1828)
DNA (714bp) protein (238aa)
DNA polymerase III, epsilon subunit {ECO:0000313|EMBL:EER61378.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EER61378.1};; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comam
DNA polymerase III, epsilon subunit n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T2B1_ACIDE
dnaQ; DNA polymerase III subunit epsilon
scnpilot_expt_750_bf_scaffold_8615_4
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1861..2199)
DNA (339bp) protein (113aa)
(2Fe-2S) ferredoxin n=1 Tax=Comamonas sp. B-9 RepID=UPI0003956BEB
ferredoxin, 2Fe-2S type, ISC system
Ferredoxin, 2Fe-2S type, ISC system {ECO:0000313|EMBL:ADX46677.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax
scnpilot_expt_750_bf_scaffold_8615_5
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2203..2442)
DNA (240bp) protein (80aa)
Chaperone protein HscA homolog n=1 Tax=Acidovorax sp. NO-1 RepID=H0BXH2_9BURK
Chaperone protein HscA homolog {ECO:0000256|HAMAP-Rule:MF_00679}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax
hscA; chaperone protein HscA
scnpilot_expt_750_bf_scaffold_8615_6
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2394..3719)
DNA (1326bp) protein (442aa)
Chaperone protein HscA homolog n=2 Tax=Alicycliphilus denitrificans RepID=E8U111_ALIDB
Fe-S protein assembly chaperone HscA
Chaperone protein HscA homolog {ECO:0000256|HAMAP-Rule:MF_00679}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicyc
scnpilot_expt_750_bf_scaffold_8615_7
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3950..4195)
DNA (246bp) protein (82aa)
CoA-transferase n=1 Tax=Acidovorax radicis RepID=UPI0002377405
chaperone protein
Co-chaperone protein HscB homolog {ECO:0000256|HAMAP-Rule:MF_00682}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphi
scnpilot_expt_750_bf_scaffold_8615_8
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4593..4916)
DNA (324bp) protein (108aa)
heme biosynthesis protein HemY n=1 Tax=Curvibacter lanceolatus RepID=UPI00037240AC
iron-sulfur cluster assembly protein isca; K13628 iron-sulfur cluster assembly protein Tax=GWA2_Curvibacter_64_110_curated
iron-sulfur cluster assembly protein IscA
scnpilot_expt_750_bf_scaffold_8615_9
Comamonadaceae bacterium B1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5017..5409)
DNA (393bp) protein (131aa)
Fes cluster assembly scaffold iscu n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KP05_9BURK
NifU homolog involved in Fe-S cluster formation
NifU homolog involved in Fe-S cluster formation {ECO:0000313|EMBL:BAO82657.1}; TaxID=1458426 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Comamonad
scnpilot_expt_750_bf_scaffold_8615_10
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5524..6744)
DNA (1221bp) protein (407aa)
cysteine desulfurase iscs (EC:2.8.1.7)
Cysteine desulfurase IscS {ECO:0000256|HAMAP-Rule:MF_00331, ECO:0000256|SAAS:SAAS00038344}; EC=2.8.1.7 {ECO:0000256|HAMAP-Rule:MF_00331, ECO:0000256|SAAS:SAAS00063383};; TaxID=596153 species="Bacteria
Cysteine desulfurase n=2 Tax=Alicycliphilus denitrificans RepID=E8U0K9_ALIDB
Displaying 11 items

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