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scnpilot_expt_750_bf_scaffold_2821_12

Organism: SCNPILOT_EXPT_750_BF_Burkholderiales_69_7_partial

partial RP 30 / 55 MC: 3 BSCG 28 / 51 MC: 6 ASCG 9 / 38 MC: 2
Location: 12473..13804

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadacea similarity UNIPROT
DB: UniProtKB
  • Identity: 57.3
  • Coverage: 471.0
  • Bit_score: 475
  • Evalue 8.40e-131
Pseudouridine synthase n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XX36_RAMTT similarity UNIREF
DB: UNIREF100
  • Identity: 57.3
  • Coverage: 471.0
  • Bit_score: 475
  • Evalue 6.00e-131
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 57.3
  • Coverage: 471.0
  • Bit_score: 475
  • Evalue 1.70e-131

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Taxonomy

Ramlibacter tataouinensis → Ramlibacter → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1332
ATGCACCCTGACGAGCCGATCCCCCCGCCGGACGCCGCCGACGCTTCCGCCACGCCGACGCCCGCCCGGCGTTCCAGAAAAAAACCAGTCACAGCGCCCGACCAGAGCGCGCCATCAGCTATCGAAACAGAAGCAACTTCGTTGCCTCCGGCGGCGGAGCAGCAGGTCGAACCGTCTCCGCTGCCGCCCGCCGAGGGCGAGGCGGTGGCCATCGACGACGTGCTGTCCGGGCGCTTCGACGCCGAAGCCGATGGCGCCGACGCCGACACCTCGCCCAAGCGCGTGCTGCTGCCGCAACCCGAGCAGCCCAAGCTGCACAAGGTGCTGGCCCAAGCCGGGCTGGGCTCGCGCCTGGAGATGGAGCAGCTGATCCTGCAGGGGCGAATCTCGGTCAACAACCAGCCGGCGCACATCGGCCAGCGCATCCAGTTCGGCGATTCGGTCAAGATCAACGGCAAGCCCATCAAGCTGCGCATCGCGCCGCCGCCGGCGCGCGTGCTGGCCTACAAGCTGCCGCGACTGCCGCAGGGCAAATGGCAGTCGGTGGGCCGGCTGGACCTGAACACCGAAGGCCTGCTGCTGTTCACCAATTCGGGTGAACTGGCCAACCGCCTGATGCACCCGCGCTTCGGGCTGGAACGCGAATACGCCGTCCGCGTGCTGGGCGCGCTGAGCGAGGACGAGAAACAGCAGCTGCTGGACGGCGTGCCGTTGGACGACGGCATGGCGCAGTTCAGCTCGGTCAAGGCCGAAGGGCAGGGCGAGGGCGCCAACCAGTGGTACCGCGTCACCATCTCCGAGGGCCGCAACCGCGAGGTGCGGCGCATGATCGAATCGGTCGGCCACGCCGTCAGCCGGCTGATCCGCATCCGCTACGGCGCCATGATGCTGCCGCGCGGCCTGCGGCGCGGCATGTGGATGGAGCTGGGCGAGCGCGACATCCGCGCGCTGGGCGAAGCCTCCGGCACGCCCGAACGCGCGATCCGCGGCGCGCCCGCGCCGCGCACGCAGCCGCAGGATCAGCCGCGCCGCGCCCGCAGCGACCGCGGCAAGGGCCGCGGCCCGCGCCCCAACATGGCCGGCGGCGCGCGCCCGCAGGGCGATGCGCCACCACGCCCCTTCGCCGGCGCTCCGCGTCGCCGTGGCGGCGCCGGCGGGCAGGACGGCGGCGGTGGGCAGCAGCCGGACCCGATGAAAACTTCGTTCGGCTACATCGGCGCCGACAGCTTCCAGCGCCAGCGCGCCCGTCGCCAGGGTGCGGGTGGCGCTGCGGGCGGGCAGGGCGGCGCAGGCAAGCGGCGTGGCCCCGGCGGCGGCGGTCGGCGCGGCTGA
PROTEIN sequence
Length: 444
MHPDEPIPPPDAADASATPTPARRSRKKPVTAPDQSAPSAIETEATSLPPAAEQQVEPSPLPPAEGEAVAIDDVLSGRFDAEADGADADTSPKRVLLPQPEQPKLHKVLAQAGLGSRLEMEQLILQGRISVNNQPAHIGQRIQFGDSVKINGKPIKLRIAPPPARVLAYKLPRLPQGKWQSVGRLDLNTEGLLLFTNSGELANRLMHPRFGLEREYAVRVLGALSEDEKQQLLDGVPLDDGMAQFSSVKAEGQGEGANQWYRVTISEGRNREVRRMIESVGHAVSRLIRIRYGAMMLPRGLRRGMWMELGERDIRALGEASGTPERAIRGAPAPRTQPQDQPRRARSDRGKGRGPRPNMAGGARPQGDAPPRPFAGAPRRRGGAGGQDGGGGQQPDPMKTSFGYIGADSFQRQRARRQGAGGAAGGQGGAGKRRGPGGGGRRG*