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scnpilot_expt_750_bf_scaffold_2821

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_2821_1
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3..2219
DNA (2217bp) protein (739aa)
2-oxoglutarate dehydrogenase E1 (EC:1.2.4.2)
2-oxoglutarate dehydrogenase, E1 subunit n=2 Tax=Alicycliphilus denitrificans RepID=E8TTC8_ALIDB
Oxoglutarate dehydrogenase protein {ECO:0000313|EMBL:GAO22864.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicyc
scnpilot_expt_750_bf_scaffold_2821_2
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2176..3528
DNA (1353bp) protein (451aa)
dihydrolipoamide succinyltransferase (EC:2.3.1.61)
2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WIH2_9BURK
2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase Tax=GWA2_Curvibacter_64_110_curated
scnpilot_expt_750_bf_scaffold_2821_3
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3600..5030
DNA (1431bp) protein (477aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
dihydrolipoamide dehydrogenase (EC:1.8.1.4)
dihydrolipoamide dehydrogenase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003757BA1
scnpilot_expt_750_bf_scaffold_2821_4
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5294..6109
DNA (816bp) protein (272aa)
AFG1-family ATPase n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TS69_ACIAC
AFG1 family ATPase
AFG1 family ATPase {ECO:0000313|EMBL:AFU45885.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
scnpilot_expt_750_bf_scaffold_2821_5
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6106..6516
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BWB3_DELAS
hypothetical protein
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
scnpilot_expt_750_bf_scaffold_2821_6
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6542..7342)
DNA (801bp) protein (267aa)
Serine/threonine protein phosphatase n=1 Tax=Polaromonas sp. CF318 RepID=J3D0D3_9BURK
Serine/threonine protein phosphatase {ECO:0000313|EMBL:EJL81946.1}; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polarom
hypothetical protein
scnpilot_expt_750_bf_scaffold_2821_7
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7415..7669
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XX32_RAMTT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG92976.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouine
scnpilot_expt_750_bf_scaffold_2821_8
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7656..9740
DNA (2085bp) protein (695aa)
Candidate ATP-dependent DNA helicase n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XX33_RAMTT
dinG; ATP-dependent DNA helicase
Candidate ATP-dependent DNA helicase {ECO:0000313|EMBL:AEG92977.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibac
scnpilot_expt_750_bf_scaffold_2821_9
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9801..10604)
DNA (804bp) protein (268aa)
Outer membrane protein assembly factor BamD n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CXF8_VARPS
outer membrane assembly lipoprotein YfiO
Outer membrane protein assembly factor BamD {ECO:0000256|HAMAP-Rule:MF_00922}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; V
scnpilot_expt_750_bf_scaffold_2821_10
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10607..11620
DNA (1014bp) protein (338aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadacea
Pseudouridine synthase n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XX34_RAMTT
rluD; uracil hydrolyase
scnpilot_expt_750_bf_scaffold_2821_11
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11731..12483
DNA (753bp) protein (251aa)
Condensin subunit ScpB n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TM21_ACIAC rbh
condensin subunit ScpB
Segregation and condensation protein B {ECO:0000256|SAAS:SAAS00086417}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acido
scnpilot_expt_750_bf_scaffold_2821_12
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12473..13804
DNA (1332bp) protein (444aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadacea
Pseudouridine synthase n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XX36_RAMTT
hypothetical protein
scnpilot_expt_750_bf_scaffold_2821_13
Cupriavidus pinatubonensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13911..14336
DNA (426bp) protein (142aa)
ndk; nucleoside diphosphate kinase (EC:2.7.4.6)
Nucleoside diphosphate kinase {ECO:0000255|HAMAP-Rule:MF_00451}; Short=NDK {ECO:0000255|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000255|HAMAP-Rule:MF_00451};; EC=2.7.4.6 {ECO:0000255|HAMAP-Rule:M
Nucleoside diphosphate kinase n=1 Tax=Cupriavidus sp. HMR-1 RepID=L2EJV7_9BURK
scnpilot_expt_750_bf_scaffold_2821_14
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14364..14681
DNA (318bp) protein (106aa)
Dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:
Dual-specificity RNA methyltransferase RlmN n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XX38_RAMTT
hypothetical protein
scnpilot_expt_750_bf_scaffold_2821_15
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14751..15419
DNA (669bp) protein (223aa)
hypothetical protein; K06941 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] Tax=GWA2_Curvibacter_64_110_curated
50S rRNA methyltransferase n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI0002EBC4D1
hypothetical protein
Displaying 15 items

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