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scnpilot_expt_750_bf_scaffold_614_curated

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_614_curated_1
unknown

Not on your lists

91..774
DNA (684bp) protein (228aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_614_curated_2
CG_Delta_07, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

841..1731
DNA (891bp) protein (297aa)
2-nitropropane dioxygenase; K00459 nitronate monooxygenase [EC:1.13.12.16]
2-nitropropane dioxygenase n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MEL7_CORCM
Tax=CG_Delta_07
scnpilot_expt_750_bf_scaffold_614_curated_3
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1852..2670
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GX92_SORC5
Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly {ECO:0000313|EMBL:EYF00012.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_614_curated_4
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2728..3096)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y6P7_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP40499.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
scnpilot_expt_750_bf_scaffold_614_curated_5
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3707..4546
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XVX8_SORCE
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:AKF11179.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_614_curated_6
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4530..5462
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FBE5_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN98004.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
scnpilot_expt_750_bf_scaffold_614_curated_7
unknown

Not on your lists

5556..6734
DNA (1179bp) protein (393aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_614_curated_8
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7178..7909
DNA (732bp) protein (244aa)
Putative secreted protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GE24_SORC5
Uncharacterized protein {ECO:0000313|EMBL:AGP39001.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_614_curated_9
unknown

Not on your lists

7882..8037
DNA (156bp) protein (52aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_614_curated_10
Caenorhabditis briggsae, Caenorhabditis, Rhabditida, Chromadorea, Nematoda, Metazoa

Not on your lists

8092..9453
DNA (1362bp) protein (454aa)
Protein CBG02561 n=1 Tax=Caenorhabditis briggsae RepID=A8WU16_CAEBR
Hypothetical protein CBG02561
Protein CBG02561 {ECO:0000313|EMBL:CAP23978.1}; TaxID=6238 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis.;" source="Caenorhabditis briggsae.;"
scnpilot_expt_750_bf_scaffold_614_curated_11
unknown

Not on your lists

9609..10544
DNA (936bp) protein (312aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_614_curated_12
unknown

Not on your lists

10687..10776
DNA (90bp) protein (30aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_614_curated_13
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10854..13652
DNA (2799bp) protein (933aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F0Z3_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN91316.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
scnpilot_expt_750_bf_scaffold_614_curated_14
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13697..14473
DNA (777bp) protein (259aa)
UTP-GlnB uridylyltransferase, GlnD (EC:2.7.7.59); K00990 [protein-PII] uridylyltransferase [EC:2.7.7.59]
Bifunctional uridylyltransferase/uridylyl-removing enzyme n=1 Tax=alpha proteobacterium IMCC14465 RepID=J9DGP4_9PROT
[Protein-PII] uridylyltransferase {ECO:0000313|EMBL:AKF07123.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
scnpilot_expt_750_bf_scaffold_614_curated_15
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14532..15503)
DNA (972bp) protein (324aa)
Putative uncharacterized protein n=1 Tax=Dictyostelium fasciculatum (strain SH3) RepID=F4PTD7_DICFS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFN47449.1}; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae CC-JY-1.;"
scnpilot_expt_750_bf_scaffold_614_curated_16
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(15528..16634)
DNA (1107bp) protein (369aa)
Regulator of chromosome condensation, RCC1 n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UQE9_ROSS1
regulator of chromosome condensation, RCC1
Regulator of chromosome condensation RCC1 {ECO:0000313|EMBL:ABU56397.1}; Flags: Precursor;; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus castenholzii (strain DSM 13941 / HLO8).;"
scnpilot_expt_750_bf_scaffold_614_curated_17
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16631..18016)
DNA (1386bp) protein (462aa)
Mg2+ transporter n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FZR9_SORC5
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
mgtE2; Mg2+ transporter; K06213 magnesium transporter
scnpilot_expt_750_bf_scaffold_614_curated_18
unknown

Not on your lists

18057..18584
DNA (528bp) protein (176aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_614_curated_19
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18659..20599)
DNA (1941bp) protein (647aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HED4_ANADF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS27080.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
scnpilot_expt_750_bf_scaffold_614_curated_20
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

20716..21723
DNA (1008bp) protein (336aa)
Putative oxidoreductase, aryl-alcohol dehydrogenases like protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LGM1_CHLTF
putative oxidoreductase, aryl-alcohol dehydrogenase like protein
Putative oxidoreductase, aryl-alcohol dehydrogenases like protein {ECO:0000313|EMBL:AEP11132.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
scnpilot_expt_750_bf_scaffold_614_curated_21
Leptospira fainei, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(21733..24555)
DNA (2823bp) protein (941aa)
Arylsulfatase {ECO:0000313|EMBL:EPG74060.1}; EC=3.1.6.- {ECO:0000313|EMBL:EPG74060.1};; TaxID=1193011 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira fainei serovar Hurstbridge str. BUT 6.;"
Arylsulfatase n=1 Tax=Leptospira fainei serovar Hurstbridge str. BUT 6 RepID=S3VC84_9LEPT
sulfatase
scnpilot_expt_750_bf_scaffold_614_curated_22
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24552..26786)
DNA (2235bp) protein (745aa)
Putative sulfatase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9P576_9DELT
sulfatase
Tax=RBG_13_Deltaproteobacteria_61_14_curated
scnpilot_expt_750_bf_scaffold_614_curated_23
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26846..27442)
DNA (597bp) protein (199aa)
Uncharacterized protein n=2 Tax=Sorangium cellulosum RepID=A9GX13_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN94004.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
scnpilot_expt_750_bf_scaffold_614_curated_24
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27583..28818
DNA (1236bp) protein (412aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XV57_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP37107.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
scnpilot_expt_750_bf_scaffold_614_curated_trna_1
unknown

Not on your lists

29388..29459
DNA (72bp)
transferRNA
scnpilot_expt_750_bf_scaffold_614_curated_25
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29501..29845)
DNA (345bp) protein (115aa)
Integrase family protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LP14_HALO1
integrase family protein
Integrase family protein {ECO:0000313|EMBL:ACY18840.1}; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
scnpilot_expt_750_bf_scaffold_614_curated_26
unknown

Not on your lists

comp(29873..30328)
DNA (456bp) protein (152aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_614_curated_27
unknown

Not on your lists

comp(30339..31763)
DNA (1425bp) protein (475aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_614_curated_28
unknown

Not on your lists

31942..32223
DNA (282bp) protein (94aa)

This feature has no annotations

Displaying 29 items

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