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scnpilot_expt_750_bf_scaffold_158_curated

Search features with annotation key words

Displaying items 1-30 of 307 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_158_curated_1
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(125..520)
DNA (396bp) protein (132aa)
Integrase, catalytic region n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G3M1_GEOUR
integrase catalytic subunit
Integrase, catalytic region {ECO:0000313|EMBL:ABQ26389.1}; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
scnpilot_expt_750_bf_scaffold_158_curated_2
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(490..1140)
DNA (651bp) protein (217aa)
Hypothetical transposase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FPG7_SORC5
transposase
Hypothetical transposase {ECO:0000313|EMBL:CAN92057.1}; Transposase {ECO:0000313|EMBL:CAN96275.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
scnpilot_expt_750_bf_scaffold_158_curated_3
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1137..1652)
DNA (516bp) protein (172aa)
Transposase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FPH0_SORC5
transposase
Transposase {ECO:0000313|EMBL:CAN92058.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
scnpilot_expt_750_bf_scaffold_158_curated_4
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

2006..3619
DNA (1614bp) protein (538aa)
YD repeat protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D4J0_9BACT
YD repeat protein {ECO:0000313|EMBL:EDY18791.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_158_curated_5
unknown

Not on your lists

3719..4675
DNA (957bp) protein (319aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_158_curated_6
unknown

Not on your lists

4745..5125
DNA (381bp) protein (127aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_158_curated_7
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

5293..5571
DNA (279bp) protein (93aa)
Resolvase n=1 Tax=Mesorhizobium sp. LSJC264A00 RepID=V7EZ99_9RHIZ
Resolvase domain
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
scnpilot_expt_750_bf_scaffold_158_curated_8
R_Deltaproteobacteria_44_53, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5588..5896
DNA (309bp) protein (103aa)
Resolvase domain-containing protein n=1 Tax=Methanoplanus limicola DSM 2279 RepID=H1Z2M8_9EURY
resolvase
Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_44_53_curated
scnpilot_expt_750_bf_scaffold_158_curated_9
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5893..6711
DNA (819bp) protein (273aa)
IS66 family transposase Orf3 n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U240_MYXSD
IS66 family transposase Orf3
IS66 family transposase Orf3 {ECO:0000313|EMBL:AGC42856.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8).;"
scnpilot_expt_750_bf_scaffold_158_curated_10
unknown

Not on your lists

6746..6952
DNA (207bp) protein (69aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_158_curated_11
unknown

Not on your lists

comp(7188..7562)
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI00037D2F44
scnpilot_expt_750_bf_scaffold_158_curated_12
unknown

Not on your lists

comp(7559..7846)
DNA (288bp) protein (96aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_158_curated_13
unknown

Not on your lists

7969..8817
DNA (849bp) protein (283aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_158_curated_14
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8970..9656
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9EYP0_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN97561.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
scnpilot_expt_750_bf_scaffold_158_curated_15
unknown

Not on your lists

9638..10699
DNA (1062bp) protein (354aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_158_curated_16
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10718..13780
DNA (3063bp) protein (1021aa)
glnE; glutamate-ammonia-ligase adenylyltransferase (EC:2.7.7.42); K00982 glutamate-ammonia-ligase adenylyltransferase [EC:2.7.7.42]
Glutamate-ammonia-ligase adenylyltransferase {ECO:0000256|SAAS:SAAS00086160, ECO:0000313|EMBL:CAN91924.1}; EC=2.7.7.42 {ECO:0000256|SAAS:SAAS00086164, ECO:0000313|EMBL:CAN91924.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Glutamate-ammonia-ligase adenylyltransferase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FJ74_SORC5
scnpilot_expt_750_bf_scaffold_158_curated_17
unknown

Not on your lists

13945..16989
DNA (3045bp) protein (1015aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_158_curated_18
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17122..17733)
DNA (612bp) protein (204aa)
Putative membrane protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9EX89_SORC5
DnaJ-class molecular chaperone CbpA {ECO:0000313|EMBL:AKF06123.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_158_curated_19
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17825..18310
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XWJ5_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP37577.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
scnpilot_expt_750_bf_scaffold_158_curated_20
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18392..20146
DNA (1755bp) protein (585aa)
protein kinase (EC:2.7.11.1)
Protein kinase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F8W3_SORC5
Serine/threonine protein kinase {ECO:0000313|EMBL:AKF09629.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
scnpilot_expt_750_bf_scaffold_158_curated_21
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20224..20880)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y8M1_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP40595.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
scnpilot_expt_750_bf_scaffold_158_curated_22
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21196..22710
DNA (1515bp) protein (505aa)
Putative regulatory protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G6K3_SORC5
regulatory protein
Putative regulatory protein {ECO:0000313|EMBL:CAN92705.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
scnpilot_expt_750_bf_scaffold_158_curated_23
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22941..24398
DNA (1458bp) protein (486aa)
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205); K00088 IMP dehydrogenase [EC:1.1.1.205]
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LKZ1_HALO1
scnpilot_expt_750_bf_scaffold_158_curated_24
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24588..25673
DNA (1086bp) protein (362aa)
Putative uncharacterized protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WSQ3_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHR73503.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hypothetical protein; K09927 hypothetical protein
scnpilot_expt_750_bf_scaffold_158_curated_25
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25864..26292
DNA (429bp) protein (143aa)
Glyoxalase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XWP6_SORCE
glyoxalase
Glyoxalase {ECO:0000313|EMBL:AGP36325.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
scnpilot_expt_750_bf_scaffold_158_curated_26
Herbaspirillum sp. GW103, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26409..27449)
DNA (1041bp) protein (347aa)
LysR family transcriptional regulator n=1 Tax=Herbaspirillum seropedicae RepID=UPI0002DC6B33
LysR family transcription regulator protein {ECO:0000313|EMBL:EIJ46279.1}; TaxID=1175306 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. GW103.;"
LysR family transcriptional regulator; K03717 LysR family transcriptional regulator, transcriptional activator of nhaA
scnpilot_expt_750_bf_scaffold_158_curated_27
unknown

Not on your lists

27729..28622
DNA (894bp) protein (298aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_158_curated_28
unknown

Not on your lists

28711..29361
DNA (651bp) protein (217aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_158_curated_29
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29420..30190
DNA (771bp) protein (257aa)
Octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262}; EC=2.3.1.181 {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262};; Lipoate-protein ligase B {ECO:0000256|HAMAP-Rule:MF_00013}; Lipoyl/octanoyl transferase {ECO:0000256|HAMAP-Rule:MF_00013}; Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.
Octanoyltransferase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XV16_SORCE
hypothetical protein
scnpilot_expt_750_bf_scaffold_158_curated_30
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30215..30940)
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9EYS8_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN97571.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Displaying items 1-30 of 307 in total

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