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scnpilot_expt_750_bf_scaffold_47_curated

Search features with annotation key words

Displaying items 1-30 of 628 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_47_curated_1
CG_Gallio_02, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

163..1692
DNA (1530bp) protein (510aa)
polyphosphate-dependent AMP kinase n=1 Tax=Azoarcus toluclasticus RepID=UPI0003787205
polyphosphate:AMP phosphotransferase
Tax=CG_Gallio_02
scnpilot_expt_750_bf_scaffold_47_curated_2
unknown

Not on your lists

1694..2569
DNA (876bp) protein (292aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_47_curated_3
Zea mays, Zea, Poales, commelinids, Streptophyta, Viridiplantae

Not on your lists

comp(2675..3139)
DNA (465bp) protein (155aa)
Putative glycine-rich protein n=2 Tax=Zea mays RepID=C4J159_MAIZE
uncharacterized LOC100857047
Putative glycine-rich protein {ECO:0000313|EMBL:AFW56391.1}; Uncharacterized protein {ECO:0000313|EMBL:ACR34909.1, ECO:0000313|EnsemblPlants:GRMZM2G009448_P01}; TaxID=4577 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogoneae; Zea.;" source="Zea mays (Maize).;"
scnpilot_expt_750_bf_scaffold_47_curated_4
unknown

Not on your lists

4160..4858
DNA (699bp) protein (233aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_47_curated_5
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4864..6798
DNA (1935bp) protein (645aa)
ABC transporter, ATP-binding protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FZ67_SORC5
uup; ABC transporter ATP-binding protein; K15738 ATP-binding cassette, subfamily F, uup
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:CAN98715.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
scnpilot_expt_750_bf_scaffold_47_curated_6
Pontibacillus halophilus, Pontibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7018..9315)
DNA (2298bp) protein (766aa)
Npr n=1 Tax=Paenibacillus mucilaginosus (strain KNP414) RepID=F8FGY4_PAEMK
Peptidase M4 {ECO:0000313|EMBL:KGX92450.1}; TaxID=1385510 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Pontibacillus.;" source="Pontibacillus halophilus JSM 076056 = DSM 19796.;"
npr; Npr
scnpilot_expt_750_bf_scaffold_47_curated_7
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9819..11105)
DNA (1287bp) protein (429aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XQM9_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP35482.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
scnpilot_expt_750_bf_scaffold_47_curated_8
unknown

Not on your lists

comp(11751..12416)
DNA (666bp) protein (222aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_47_curated_9
unknown

Not on your lists

comp(12743..13948)
DNA (1206bp) protein (402aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_47_curated_10
R_RIF_OP11_03_50_28, RIF-OP11-3, Microgenomates, Bacteria

Not on your lists

comp(14171..15400)
DNA (1230bp) protein (410aa)
Glycosyl transferase n=18 Tax=Enterococcus faecium RepID=C9CEB8_ENTFC
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_03_50_28_curated
scnpilot_expt_750_bf_scaffold_47_curated_11
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15453..16613
DNA (1161bp) protein (387aa)
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=J9YCW6_ALTMA
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:GAM11023.1}; TaxID=1266765 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. OR-1.;"
UDP-N-acetylglucosamine 2-epimerase
scnpilot_expt_750_bf_scaffold_47_curated_12
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16617..17444
DNA (828bp) protein (276aa)
WecB/TagA/CpsF family glycosyl transferase (EC:2.4.1.187)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00036A4AC0
UDP-N-acetyl-D-mannosamine transferase {ECO:0000313|EMBL:BAP54936.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
scnpilot_expt_750_bf_scaffold_47_curated_13
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17572..18039)
DNA (468bp) protein (156aa)
cytochrome c oxidase subunit IV; K02277 cytochrome c oxidase subunit IV [EC:1.9.3.1]
Putative cytochrome c oxidase subunit IV n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F521_SORC5
Caa(3)-type oxidase, subunit IV subfamily, putative {ECO:0000313|EMBL:AKF06461.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
scnpilot_expt_750_bf_scaffold_47_curated_14
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18053..18763)
DNA (711bp) protein (237aa)
cytochrome oxidase subunit III n=1 Tax=Schlesneria paludicola RepID=UPI00029A60AD
Cytochrome c oxidase polypeptide III {ECO:0000313|EMBL:AKF06460.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
cytochrome C oxidase subunit III
scnpilot_expt_750_bf_scaffold_47_curated_15
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18760..20508)
DNA (1749bp) protein (583aa)
cytochrome-c oxidase (EC:1.9.3.1); K02274 cytochrome c oxidase subunit I [EC:1.9.3.1]
Putative Cytochrome-c oxidase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F513_SORC5
Cytochrome c oxidase polypeptide I {ECO:0000313|EMBL:AKF06459.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
scnpilot_expt_750_bf_scaffold_47_curated_16
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20537..21511)
DNA (975bp) protein (325aa)
cytochrome-c oxidase (EC:1.9.3.1); K02275 cytochrome c oxidase subunit II [EC:1.9.3.1]
Cytochrome c oxidase subunit 2 n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F508_SORC5
Cytochrome c oxidase polypeptide II {ECO:0000313|EMBL:AKF06458.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
scnpilot_expt_750_bf_scaffold_47_curated_17
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(21514..22482)
DNA (969bp) protein (323aa)
Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=U3GM44_SINAD
hypothetical protein
Tax=RBG_13_Acidobacteria_68_16_curated
scnpilot_expt_750_bf_scaffold_47_curated_18
unknown

Not on your lists

comp(22522..23070)
DNA (549bp) protein (183aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_47_curated_19
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23096..24595)
DNA (1500bp) protein (500aa)
Uncharacterized protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DUB4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AKF06455.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_47_curated_20
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24592..25470)
DNA (879bp) protein (293aa)
hypothetical protein n=1 Tax=Balneola vulgaris RepID=UPI00036476CF
ABC-type Fe3+ transport system protein {ECO:0000313|EMBL:AKF06454.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
quinol:cytochrome c oxidoreductase monoheme cytochrome subunit
scnpilot_expt_750_bf_scaffold_47_curated_21
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25470..26087)
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI000379E19D
ABC-type Fe3+ transport system protein {ECO:0000313|EMBL:AKF06453.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_47_curated_22
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26087..27523)
DNA (1437bp) protein (479aa)
molybdopterin oxidoreductase, membrane subunit; K00185 molybdopterin oxidoreductase, membrane subunit [EC:1.2.7.-]
molybdopterin oxidoreductase, membrane subunit; K00185 molybdopterin oxidoreductase, membrane subunit [EC:1.2.7.-] id=24658042 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Molybdopterin oxidoreductase {ECO:0000313|EMBL:AKF06452.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
scnpilot_expt_750_bf_scaffold_47_curated_23
Caldithrix abyssi, Caldithrix, Bacteria

Not on your lists

comp(27527..30838)
DNA (3312bp) protein (1104aa)
4Fe-4S ferredoxin; K00184 molybdopterin oxidoreductase, iron-sulfur binding subunit [EC:1.2.7.-]
Fe-S-cluster-containing hydrogenase n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XPN6_9BACT
Fe-S-cluster-containing hydrogenase {ECO:0000313|EMBL:EHO39957.1}; TaxID=880073 species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
scnpilot_expt_750_bf_scaffold_47_curated_24
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30835..31464)
DNA (630bp) protein (210aa)
hypothetical protein n=1 Tax=Balneola vulgaris RepID=UPI000372B411
Molybdopterin oxidoreductase subunit protein HtpG {ECO:0000313|EMBL:AKF06450.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
cytochrome c family protein
scnpilot_expt_750_bf_scaffold_47_curated_25
unknown

Not on your lists

comp(31715..32158)
DNA (444bp) protein (148aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_47_curated_26
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32317..33240)
DNA (924bp) protein (308aa)
ctaB; Protoheme IX farnesyltransferase (EC:2.5.1.-); K02301 protoheme IX farnesyltransferase [EC:2.5.1.-]
Protoheme IX farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_00154};; Heme B farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; Heme O synthase {ECO:0000256|HAMAP-Rule:MF_00154}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
Protoheme IX farnesyltransferase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XII3_SORCE
scnpilot_expt_750_bf_scaffold_47_curated_27
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33469..45567
DNA (12099bp) protein (4033aa)
Tetratricopeptide TPR_4 n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LJS6_HALO1
hypothetical protein
Tetratricopeptide TPR_4 {ECO:0000313|EMBL:ACY18433.1}; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
scnpilot_expt_750_bf_scaffold_47_curated_28
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45631..46299)
DNA (669bp) protein (223aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HB37_ANADF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS25933.1}; Flags: Precursor;; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
scnpilot_expt_750_bf_scaffold_47_curated_29
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46432..48396)
DNA (1965bp) protein (655aa)
Uncharacterized protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UHJ2_MYXSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGC48441.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8).;"
scnpilot_expt_750_bf_scaffold_47_curated_30
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(48499..49092)
DNA (594bp) protein (198aa)
Heavy-metal resistance protein {ECO:0000313|EMBL:AHG88946.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Putative uncharacterized protein id=4419195 bin=GWF2_Lentisphaerae_50_93 species=Microscilla marina genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
Displaying items 1-30 of 628 in total

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