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scnpilot_expt_750_bf_scaffold_214_curated

Search features with annotation key words

Displaying items 1-30 of 145 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_214_curated_1
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

55..1509
DNA (1455bp) protein (485aa)
Transposase, IS4 family n=2 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F243_SORC5
IS4 family transposase
Transposase, IS4 family {ECO:0000313|EMBL:CAN94450.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
scnpilot_expt_750_bf_scaffold_214_curated_2
unknown

Not on your lists

1686..2375
DNA (690bp) protein (230aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_214_curated_3
RIFOXYD1_FULL_Bdellovibrionales_53_11_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(3128..4093)
DNA (966bp) protein (322aa)
Putative phosphohydrolase n=1 Tax=Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416 / KR-200) RepID=L0A3L5_DEIPD
phosphoesterase
Tax=RIFOXYD1_FULL_Bdellovibrionales_53_11_curated
scnpilot_expt_750_bf_scaffold_214_curated_4
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4187..4966)
DNA (780bp) protein (260aa)
surE1; acid phosphatase (EC:3.1.3.2); K03787 5'-nucleotidase [EC:3.1.3.5]
5'-nucleotidase SurE {ECO:0000255|HAMAP-Rule:MF_00060}; EC=3.1.3.5 {ECO:0000255|HAMAP-Rule:MF_00060};; Nucleoside 5'-monophosphate phosphohydrolase {ECO:0000255|HAMAP-Rule:MF_00060}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
5'-nucleotidase SurE n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=SURE_SORC5
scnpilot_expt_750_bf_scaffold_214_curated_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

5184..7526
DNA (2343bp) protein (781aa)
Prolyl oligopeptidase {ECO:0000313|EMBL:CDM65963.1}; EC=3.4.21.26 {ECO:0000313|EMBL:CDM65963.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
prolyl oligopeptidase (EC:3.4.21.26); K01322 prolyl oligopeptidase [EC:3.4.21.26]
Prolyl oligopeptidase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C7Y4_SPHTD
scnpilot_expt_750_bf_scaffold_214_curated_6

Not on your lists

comp(7704..8126)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I5M3_CALAS
Uncharacterized protein {ECO:0000313|EMBL:KKN62841.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_214_curated_7
unknown

Not on your lists

8463..8756
DNA (294bp) protein (98aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_214_curated_8
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8833..10695
DNA (1863bp) protein (621aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XNJ2_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP34742.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
scnpilot_expt_750_bf_scaffold_214_curated_9
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10922..11920)
DNA (999bp) protein (333aa)
Cyclic pyranopterin phosphate synthase {ECO:0000256|SAAS:SAAS00064088}; EC=4.1.99.18 {ECO:0000256|SAAS:SAAS00064088};; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XZX2_SORCE
hypothetical protein
scnpilot_expt_750_bf_scaffold_214_curated_10
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12138..12644
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XR17_SORCE
Molybdenum cofactor biosynthesis protein B {ECO:0000256|PIRNR:PIRNR006443}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_214_curated_11
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12644..12892
DNA (249bp) protein (83aa)
molybdopterin converting factor subunit 1; K03635 molybdopterin synthase catalytic subunit [EC:2.-.-.-]
Molybdopterin synthase subunit MoaD / molybdopterin synthase subunit MoaE n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UY53_ROSS1
Uncharacterized protein {ECO:0000313|EMBL:AKF10477.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
scnpilot_expt_750_bf_scaffold_214_curated_12
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12912..13397)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XUJ1_SORCE
Molybdenum cofactor biosynthesis protein MoaC {ECO:0000313|EMBL:EYF05401.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_214_curated_13
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13394..13906)
DNA (513bp) protein (171aa)
Cyclic pyranopterin monophosphate synthase accessory protein n=1 Tax=Alcanivorax sp. DG881 RepID=B4X175_9GAMM
Molybdenum cofactor biosynthesis protein MoaC {ECO:0000313|EMBL:AKF10662.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
moaC; molybdenum cofactor biosynthesis protein C; K03637 molybdenum cofactor biosynthesis protein C
scnpilot_expt_750_bf_scaffold_214_curated_14
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13924..15327)
DNA (1404bp) protein (468aa)
moeA1; molybdopterin biosynthesis protein; K03750 molybdopterin molybdotransferase [EC:2.10.1.1]
Probable molybdopterin biosynthesis protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G1Z3_SORC5
Probable molybdopterin biosynthesis protein {ECO:0000313|EMBL:CAN92561.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
scnpilot_expt_750_bf_scaffold_214_curated_15
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15388..16341)
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XZP1_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP36093.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
scnpilot_expt_750_bf_scaffold_214_curated_16
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16338..17072)
DNA (735bp) protein (245aa)
Transcriptional regulator, TetR family n=1 Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QKM6_DESB2
Fatty acid degradation regulator YsiA, TetR family {ECO:0000313|EMBL:AKF05560.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
TetR family transcriptional regulator; K13770 TetR/AcrR family transcriptional regulator, fatty acid metabolism regulator protein
scnpilot_expt_750_bf_scaffold_214_curated_17
Salinisphaera shabanensis, Salinisphaera, Salinisphaerales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17152..17415)
DNA (264bp) protein (88aa)
Flagellar biosynthesis protein n=1 Tax=Salinisphaera shabanensis E1L3A RepID=U2EI89_9GAMM
Flagellar biosynthesis protein {ECO:0000313|EMBL:ERJ17800.1}; TaxID=1033802 species="Bacteria; Proteobacteria; Gammaproteobacteria; Salinisphaerales; Salinisphaeraceae; Salinisphaera.;" source="Salinisphaera shabanensis E1L3A.;"
fliQ; flagellar biosynthetic protein; K02420 flagellar biosynthetic protein FliQ
scnpilot_expt_750_bf_scaffold_214_curated_18
unknown

Not on your lists

comp(17425..17802)
DNA (378bp) protein (126aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_214_curated_19
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17934..18500)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XUS6_SORCE
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:EYF04676.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_214_curated_20
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18765..20738)
DNA (1974bp) protein (658aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XSE2_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EYF04675.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
scnpilot_expt_750_bf_scaffold_214_curated_21
unknown

Not on your lists

comp(20753..21589)
DNA (837bp) protein (279aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_214_curated_22
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21605..22708)
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y4T5_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP39436.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
scnpilot_expt_750_bf_scaffold_214_curated_23
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22713..23225)
DNA (513bp) protein (171aa)
Biotin/lipoic acid binding domain protein n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1DDA3_MYXXD
Methylcrotonyl-CoA carboxylase biotin-containing subunit {ECO:0000313|EMBL:EYF04100.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
biotin/lipoic acid binding domain-containing protein
scnpilot_expt_750_bf_scaffold_214_curated_24
unknown

Not on your lists

comp(23360..24247)
DNA (888bp) protein (296aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_214_curated_25
CG_Delta_07, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24244..27861)
DNA (3618bp) protein (1206aa)
Tax=CG_Delta_07
scnpilot_expt_750_bf_scaffold_214_curated_26
unknown

Not on your lists

27892..28731
DNA (840bp) protein (280aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_214_curated_27
CG_Delta_07, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28748..32218)
DNA (3471bp) protein (1157aa)
Tax=CG_Delta_07
scnpilot_expt_750_bf_scaffold_214_curated_28
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32312..34057)
DNA (1746bp) protein (582aa)
Putative secreted protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GCV8_SORC5
hypothetical protein
Putative secreted protein {ECO:0000313|EMBL:CAN96245.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
scnpilot_expt_750_bf_scaffold_214_curated_29
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34630..36189
DNA (1560bp) protein (520aa)
Histidine ammonia-lyase {ECO:0000256|HAMAP-Rule:MF_00229, ECO:0000256|RuleBase:RU004479}; Short=Histidase {ECO:0000256|HAMAP-Rule:MF_00229};; EC=4.3.1.3 {ECO:0000256|HAMAP-Rule:MF_00229, ECO:0000256|RuleBase:RU004479};; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
Histidine ammonia-lyase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y9E9_SORCE
histidine ammonia-lyase
scnpilot_expt_750_bf_scaffold_214_curated_30
unknown

Not on your lists

comp(36149..36673)
DNA (525bp) protein (175aa)

This feature has no annotations

Displaying items 1-30 of 145 in total

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