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scnpilot_expt_750_p_scaffold_427

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Displaying items 1-30 of 137 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_p_scaffold_427_1
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..123)
DNA (123bp) protein (41aa)
argininosuccinate lyase (EC:4.3.2.1); K01755 argininosuccinate lyase [EC:4.3.2.1] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
argininosuccinate lyase (EC:4.3.2.1)
argininosuccinate lyase n=1 Tax=Thiobacillus denitrificans RepID=UPI00037670D5
scnpilot_expt_750_p_scaffold_427_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

141..1187
DNA (1047bp) protein (349aa)
two-component system sensor ATPase; K08082 two-component system, LytT family, sensor histidine kinase AlgZ [EC:2.7.13.3] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
histidine kinase n=1 Tax=Thiobacillus thioparus RepID=UPI00037F1DCD rbh
two-component system sensor ATPase
scnpilot_expt_750_p_scaffold_427_3
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1144..1914
DNA (771bp) protein (257aa)
LytR/AlgR family transcriptional regulator; K08083 two-component system, LytT family, response regulator AlgR id=12494527 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
LytR/AlgR family transcriptional regulator
Response regulator receiver domain protein (CheY) {ECO:0000313|EMBL:AAZ96184.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus
scnpilot_expt_750_p_scaffold_427_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2099..2722
DNA (624bp) protein (208aa)
hypothetical protein; K01515 ADP-ribose pyrophosphatase [EC:3.6.1.13] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
NUDIX hydrolase n=1 Tax=Thiobacillus thioparus RepID=UPI000364008F
hypothetical protein
scnpilot_expt_750_p_scaffold_427_5
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2741..6427)
DNA (3687bp) protein (1229aa)
metH; B12-dependent methionine synthase (EC:2.1.1.13)
methionine synthase n=1 Tax=Thiobacillus denitrificans RepID=UPI00037D6956 rbh
5-methyltetrahydrofolate--homocysteine methyltransferase {ECO:0000313|EMBL:AAZ96187.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiob
scnpilot_expt_750_p_scaffold_427_6
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6698..7084
DNA (387bp) protein (129aa)
Rhodanese-like protein id=1312389 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
rhodanese-like protein Tax=GWE1_Thiobacillus_62_9_curated
rhodanese-like protein
scnpilot_expt_750_p_scaffold_427_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7129..8160)
DNA (1032bp) protein (344aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036A8D27
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
scnpilot_expt_750_p_scaffold_427_8
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8157..9647)
DNA (1491bp) protein (497aa)
Fis family transcriptional regulator n=1 Tax=Thiobacillus denitrificans RepID=UPI000361D35B rbh
Mg chelatase-like protein
Mg chelatase-related protein {ECO:0000313|EMBL:AAZ96190.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacil
scnpilot_expt_750_p_scaffold_427_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9652..9915)
DNA (264bp) protein (88aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000378E01C
hypothetical protein; K09806 hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
scnpilot_expt_750_p_scaffold_427_10
Thauera sp. 63, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10157..10849
DNA (693bp) protein (231aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035C2384 rbh
Transmembrane protein {ECO:0000313|EMBL:ENO77306.1}; TaxID=497321 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 63.;"
transmembrane protein
scnpilot_expt_750_p_scaffold_427_11
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10868..11206
DNA (339bp) protein (113aa)
nitrogen regulatory protein P-II 1 n=1 Tax=Thiobacillus thioparus RepID=UPI0003802BA8
nitrogen regulatory protein P-II; K04752 nitrogen regulatory protein P-II 2 Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
nitrogen regulatory protein P-II
scnpilot_expt_750_p_scaffold_427_12
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11217..12599
DNA (1383bp) protein (461aa)
ammonia channel protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003715393 rbh
ammonium transporter
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" sour
scnpilot_expt_750_p_scaffold_427_13
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12656..13327)
DNA (672bp) protein (224aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035F8B3B rbh
hypothetical protein; K09915 hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
scnpilot_expt_750_p_scaffold_427_14
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13675..14160
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000373B388
hypothetical protein Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
hypothetical protein
scnpilot_expt_750_p_scaffold_427_15
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14206..14418
DNA (213bp) protein (71aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037F0241
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
scnpilot_expt_750_p_scaffold_427_16
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14427..16589
DNA (2163bp) protein (721aa)
ATPase P n=1 Tax=Thauera sp. 27 RepID=N6Y9I9_9RHOO
heavy metal translocating P-type ATPase
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:BAO28414.1}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfu
scnpilot_expt_750_p_scaffold_427_17
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16657..17532
DNA (876bp) protein (292aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003739FEA rbh
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
scnpilot_expt_750_p_scaffold_427_18
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17535..18587
DNA (1053bp) protein (351aa)
homoserine O-succinyltransferase (EC:2.3.1.46); K00651 homoserine O-succinyltransferase [EC:2.3.1.46] Tax=GWE1_Thiobacillus_62_9_curated
homoserine O-succinyltransferase (EC:2.3.1.46)
homoserine O-succinyltransferase n=1 Tax=Thiobacillus denitrificans RepID=UPI00036CD9ED rbh
scnpilot_expt_750_p_scaffold_427_19
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18584..19378
DNA (795bp) protein (265aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003672415
ABC transporter permease; K02066 putative ABC transport system permease protein Tax=GWE1_Thiobacillus_62_9_curated
ABC transporter permease
scnpilot_expt_750_p_scaffold_427_20
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19378..20145
DNA (768bp) protein (256aa)
toluene ABC transporter ATP-binding protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000367C5EC rbh
ABC transporter ATP-binding protein; K02065 putative ABC transport system ATP-binding protein Tax=GWE1_Thiobacillus_62_9_curated
ABC transporter ATP-binding protein
scnpilot_expt_750_p_scaffold_427_21
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20135..21082
DNA (948bp) protein (316aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037F5D3C rbh
ABC-type transport system periplasmic component; K02067 putative ABC transport system substrate-binding protein Tax=GWE1_Thiobacillus_62_9_curated
ABC-type transport system periplasmic component
scnpilot_expt_750_p_scaffold_427_22
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21079..21681
DNA (603bp) protein (201aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003607F93 rbh
putative lipoprotein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
lipoprotein
scnpilot_expt_750_p_scaffold_427_23
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21729..22157
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003701750
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
scnpilot_expt_750_p_scaffold_427_24
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22223..22903)
DNA (681bp) protein (227aa)
membrane protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000373FE94 rbh
hypothetical protein; K09792 hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
scnpilot_expt_750_p_scaffold_427_25
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22900..24264)
DNA (1365bp) protein (455aa)
Putative transport transmembrane protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SM44_THIDA rbh
transport transmembrane protein
Putative transport transmembrane protein {ECO:0000313|EMBL:AAZ96206.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Th
scnpilot_expt_750_p_scaffold_427_26
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24261..25040)
DNA (780bp) protein (260aa)
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18); K01142 exodeoxyribonuclease III [EC:3.1.11.2] Tax=GWE1_Thiobacillus_62_9_curated
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18)
exodeoxyribonuclease III n=1 Tax=Thiobacillus thioparus RepID=UPI00036B3EF3 rbh
scnpilot_expt_750_p_scaffold_427_27
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25069..25599
DNA (531bp) protein (177aa)
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10); K00762 orotate phosphoribosyltransferase [EC:2.4.2.10] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10)
orotate phosphoribosyltransferase n=1 Tax=Thiobacillus denitrificans RepID=UPI00037FBA06
scnpilot_expt_750_p_scaffold_427_28
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25538..26185
DNA (648bp) protein (216aa)
Putative uncharacterized protein id=1355127 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
scnpilot_expt_750_p_scaffold_427_29
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26238..27668)
DNA (1431bp) protein (477aa)
gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B (EC:6.3.5.-); K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] Tax=GWE1_Thiobacillus_62_9_curated
gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B id=1355126 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
scnpilot_expt_750_p_scaffold_427_30
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27740..29215)
DNA (1476bp) protein (492aa)
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A (EC:6.3.5.-); K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] Tax=GWE1_Thiobacillus_62_9_curated
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A (EC:6.3.5.-)
glutamyl-tRNA amidotransferase subunit A n=1 Tax=Thiobacillus denitrificans RepID=UPI000365314F rbh
Displaying items 1-30 of 137 in total

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