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scnpilot_expt_750_p_scaffold_2402

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_p_scaffold_2402_1
unknown

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comp(3..167)
DNA (165bp) protein (55aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_2402_2
unknown

Not on your lists

236..1327
DNA (1092bp) protein (364aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_2402_3
Candidatus Scalindua brodae, Candidatus Scalindua, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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1738..1941
DNA (204bp) protein (68aa)
Type III restriction protein res subunit n=1 Tax=Arcobacter nitrofigilis (strain ATCC 33309 / DSM 7299 / LMG 7604 / NCTC 12251 / CI) RepID=D5V6X1_ARCNC
Uncharacterized protein {ECO:0000313|EMBL:KHE91566.1}; TaxID=237368 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Scalindua.;" source="
type III restriction protein res subunit
scnpilot_expt_750_p_scaffold_2402_4
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2195..2500
DNA (306bp) protein (102aa)
DNA mismatch repair protein MutS n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5J1J6_9PORP
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgon
DNA mismatch repair protein muts
scnpilot_expt_750_p_scaffold_2402_5
Bacteroides finegoldii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2505..4436)
DNA (1932bp) protein (644aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 3_2_5 RepID=C6IAK2_9BACE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKJ91750.1}; TaxID=997888 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides finegoldii CL09T03C
scnpilot_expt_750_p_scaffold_2402_6
Bacteroides finegoldii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4452..4997)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 3_2_5 RepID=C6IAK3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKJ91751.1}; TaxID=997888 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides finegoldii CL09T03C
hypothetical protein
scnpilot_expt_750_p_scaffold_2402_7
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(5146..5763)
DNA (618bp) protein (206aa)
Restriction endonuclease {ECO:0000313|EMBL:KFC19443.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas
Probable type II restriction endonuclease id=3035737 bin=GWF2_Lentisphaerae_38_69 species=Flavobacterium branchiophilum genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Lentisphaerae_38_69 organism_group=Lentisphaerae organism_desc=a349
restriction endonuclease Sau96I
scnpilot_expt_750_p_scaffold_2402_8
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5888..7006)
DNA (1119bp) protein (373aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IVK5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK02655.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BA
hypothetical protein
scnpilot_expt_750_p_scaffold_2402_9
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7043..7717)
DNA (675bp) protein (225aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8WXW1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK04564.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22
fructose-2,6-bisphosphatase
scnpilot_expt_750_p_scaffold_2402_10
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7751..8158)
DNA (408bp) protein (136aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8WXW0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK04563.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22
hypothetical protein
scnpilot_expt_750_p_scaffold_2402_11
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8496..9302)
DNA (807bp) protein (269aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X157_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK03329.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22
glycosyl transferase family protein
scnpilot_expt_750_p_scaffold_2402_12
unknown

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comp(9417..9584)
DNA (168bp) protein (56aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_2402_13
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9633..10538
DNA (906bp) protein (302aa)
Transcriptional regulator, AraC family n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C1E7_SPHS2
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ADZ79220.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" sour
scnpilot_expt_750_p_scaffold_2402_14
Chryseobacterium formosense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

10637..11068
DNA (432bp) protein (144aa)
Arabinose efflux permease family protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CP62_9FLAO
Multidrug transporter {ECO:0000313|EMBL:KFE98038.1}; TaxID=236814 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium fo
multidrug transporter
scnpilot_expt_750_p_scaffold_2402_15
Elizabethkingia sp. BM10, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

11234..11839
DNA (606bp) protein (202aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003655818
ydhC_2; Inner membrane transport protein YdhC
Inner membrane transport protein YdhC {ECO:0000313|EMBL:AJW63156.1}; TaxID=722877 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Eliz
Displaying 15 items

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