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scnpilot_expt_750_p_scaffold_202

Search features with annotation key words

Displaying items 1-30 of 130 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_p_scaffold_202_1
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

179..2272
DNA (2094bp) protein (698aa)
iron-sulfur binding protein n=1 Tax=Azoarcus toluclasticus RepID=UPI000379B3B4 rbh
iron-sulfur binding protein
Putative iron-sulfur binding protein {ECO:0000313|EMBL:CAI07778.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum
scnpilot_expt_750_p_scaffold_202_2
Thauera sp. MZ1T, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2269..2907
DNA (639bp) protein (213aa)
Cytoplasmic chaperone TorD family protein n=2 Tax=Thauera RepID=C4KCB3_THASP
cytoplasmic chaperone TorD family protein
Cytoplasmic chaperone TorD family protein {ECO:0000313|EMBL:ACR02304.1}; TaxID=85643 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp
scnpilot_expt_750_p_scaffold_202_3
unknown

Not on your lists

2933..3166
DNA (234bp) protein (78aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_202_4
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3183..6107
DNA (2925bp) protein (975aa)
Probable formate dehydrogenase alpha subunit {ECO:0000313|EMBL:CAL96098.1}; EC=1.2.1.2 {ECO:0000313|EMBL:CAL96098.1};; TaxID=62928 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales;
fdhA2; formate dehydrogenase subunit alpha (EC:1.2.1.2)
Probable formate dehydrogenase alpha subunit n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1KB92_AZOSB rbh
scnpilot_expt_750_p_scaffold_202_5
Thauera sp. MZ1T, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6136..6792
DNA (657bp) protein (219aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein n=2 Tax=Thauera RepID=C4KCB0_THASP rbh
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
4Fe-4S ferredoxin iron-sulfur binding domain protein {ECO:0000313|EMBL:ACR02301.1}; TaxID=85643 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source=
scnpilot_expt_750_p_scaffold_202_6
BJP_IG2103_Rhodocyclales_63_50, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6789..7010
DNA (222bp) protein (74aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI00037AF4BA
hypothetical protein
Tax=BJP_IG2103_Rhodocyclales_63_50
scnpilot_expt_750_p_scaffold_202_7
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7020..8102
DNA (1083bp) protein (361aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI00036CA446 rbh
fdhC; putative formate dehydrogenase, gamma subunit
Putative formate dehydrogenase, gamma subunit {ECO:0000313|EMBL:BAL22425.1}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoa
scnpilot_expt_750_p_scaffold_202_8
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8099..8437
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Methyloversatilis universalis RepID=UPI00036ACD37
hypothetical protein
Tax=BJP_IG2103_Dechloromonas_63_51
scnpilot_expt_750_p_scaffold_202_9
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8589..9206
DNA (618bp) protein (206aa)
DNA-3-methyladenine glycosylase {ECO:0000313|EMBL:EXI86355.1}; EC=3.2.2.21 {ECO:0000313|EMBL:EXI86355.1};; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacte
HhH-GPD family protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RN26_ACCPU rbh
HhH-GPD family protein
scnpilot_expt_750_p_scaffold_202_10
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9257..9733)
DNA (477bp) protein (159aa)
Ferritin-like protein n=1 Tax=Azoarcus sp. KH32C RepID=H0PU53_9RHOO
ferritin-like protein
Ferritin-like protein {ECO:0000313|EMBL:BAP58094.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
scnpilot_expt_750_p_scaffold_202_11
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9743..10063)
DNA (321bp) protein (107aa)
Ferredoxin-like protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QI76_AZOSU
ferredoxin-like protein
Ferredoxin-like protein {ECO:0000313|EMBL:AEV27479.1}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain AT
scnpilot_expt_750_p_scaffold_202_12

Not on your lists

comp(10060..11376)
DNA (1317bp) protein (439aa)
FixC oxidoreductase subunit with FAD/NAD(P)-binding domain {ECO:0000313|EMBL:CBI09936.1}; EC=1.5.5.1 {ECO:0000313|EMBL:CBI09936.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecologic
FixC oxidoreductase subunit with FAD/NAD(P)-binding domain n=1 Tax=mine drainage metagenome RepID=E6QRR4_9ZZZZ rbh
fixC_etfD; electron-transferring-flavoprotein dehydrogenase
scnpilot_expt_750_p_scaffold_202_13

Not on your lists

comp(11373..12530)
DNA (1158bp) protein (386aa)
Protein fixB n=1 Tax=mine drainage metagenome RepID=E6QHC8_9ZZZZ rbh
Protein fixB {ECO:0000313|EMBL:CBI06642.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
fixB; electron transfer flavoprotein subunit alpha
scnpilot_expt_750_p_scaffold_202_14

Not on your lists

comp(12527..13396)
DNA (870bp) protein (290aa)
FixA n=1 Tax=uncultured bacterium DX-1A-14 RepID=M1L785_9BACT rbh
FixA {ECO:0000313|EMBL:AGF34081.1}; TaxID=1292053 species="Bacteria; environmental samples.;" source="uncultured bacterium DX-1A-14.;"
fixA; flavoprotein subunit subunit beta
scnpilot_expt_750_p_scaffold_202_15
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13569..14537
DNA (969bp) protein (323aa)
acetyl-CoA carboxylase carboxyltransferase subunit alpha (EC:6.4.1.2)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=ACCA_DECAR rbh
Tax=BJP_08E140C01_Dechloromonas_61_78
scnpilot_expt_750_p_scaffold_202_16
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14506..15930
DNA (1425bp) protein (475aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161, ECO:0000256|SAAS:SAAS00043109}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161, ECO:0000256|SAAS:SAAS00043112};; tRNA(Ile)-2-lysyl-cytidine
tRNA(Ile)-lysidine synthase n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RN28_ACCPU rbh
tRNA(Ile)-lysidine synthetase
scnpilot_expt_750_p_scaffold_202_17
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15973..19104)
DNA (3132bp) protein (1044aa)
hypothetical protein n=1 Tax=Uliginosibacterium gangwonense RepID=UPI0003800B73 rbh
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
hypothetical protein
scnpilot_expt_750_p_scaffold_202_18
Candidatus Accumulibacter sp. SK-11, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19189..19806)
DNA (618bp) protein (206aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RN31_ACCPU rbh
Transcriptional regulatory protein FixJ {ECO:0000313|EMBL:EXI68277.1}; TaxID=1454000 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibact
two component LuxR family transcriptional regulator
scnpilot_expt_750_p_scaffold_202_19
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19803..21797)
DNA (1995bp) protein (665aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source=
Multi-sensor signal transduction histidine kinase n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RN32_ACCPU rbh
multi-sensor signal transduction histidine kinase
scnpilot_expt_750_p_scaffold_202_20
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21952..23301
DNA (1350bp) protein (450aa)
C4-dicarboxylate transport protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=DCTA_DECAR rbh
C4-dicarboxylate transporter DctA
C4-dicarboxylate transport protein {ECO:0000255|HAMAP-Rule:MF_01300}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechlo
scnpilot_expt_750_p_scaffold_202_21
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23429..24433
DNA (1005bp) protein (335aa)
Probable c4-dicarboxylate-binding periplasmic protein n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K3Y1_AZOSB rbh
dctP2; c4-dicarboxylate-binding periplasmic protein
Probable c4-dicarboxylate-binding periplasmic protein {ECO:0000313|EMBL:CAL93536.1}; TaxID=62928 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" sourc
scnpilot_expt_750_p_scaffold_202_22
Thauera aminoaromatica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24508..25212
DNA (705bp) protein (235aa)
Tripartite ATP-independent periplasmic transporter DctQ component n=2 Tax=Thauera RepID=C4KCP3_THASP rbh
tripartite ATP-independent periplasmic transporter DctQ component
Tripartite ATP-independent periplasmic transporter DctQ component {ECO:0000313|EMBL:ENO83579.1}; TaxID=1234381 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Tha
scnpilot_expt_750_p_scaffold_202_23
Thauera aminoaromatica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25209..26492
DNA (1284bp) protein (428aa)
TRAP dicarboxylate transporter, DctM subunit n=2 Tax=Thauera RepID=C4KCP2_THASP rbh
TRAP dicarboxylate transporter subunit DctM
TRAP dicarboxylate transporter subunit DctM {ECO:0000313|EMBL:ENO83580.1}; TaxID=1234381 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauer
scnpilot_expt_750_p_scaffold_202_24
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26696..27124
DNA (429bp) protein (143aa)
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.7.4.6 {ECO:0000256|HAMAP-Rule:M
Nucleoside diphosphate kinase n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QI75_AZOSU
nucleoside diphosphate kinase
scnpilot_expt_750_p_scaffold_202_25
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27150..28244
DNA (1095bp) protein (365aa)
Dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:
Dual-specificity RNA methyltransferase RlmN n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QI74_AZOSU rbh
2-oxoglutarate synthase subunit, 2-oxoacid-ferredoxin oxidoreductase subunit CD
scnpilot_expt_750_p_scaffold_202_26
Candidatus Accumulibacter sp. BA-91, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28241..29044
DNA (804bp) protein (268aa)
Type IV pilus biogenesis/stability protein PilW n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RN38_ACCPU
Type IV pilus biogenesis/stability protein PilW {ECO:0000313|EMBL:KFB72959.1}; Flags: Precursor;; TaxID=1454002 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" sour
type IV pilus biogenesis/stability protein PilW
scnpilot_expt_750_p_scaffold_202_27
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29041..30066
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QI72_AZOSU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV27475.1}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain AT
scnpilot_expt_750_p_scaffold_202_28
Candidatus Accumulibacter sp. BA-92, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30063..31316
DNA (1254bp) protein (418aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.1 {ECO:0000256|SAAS:SAAS00088795};; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hyd
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RN40_ACCPU rbh
scnpilot_expt_750_p_scaffold_202_29
Candidatus Accumulibacter sp. BA-94, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


31313..32608
DNA (1296bp) protein (432aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:00
hisS; histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RN41_ACCPU rbh
scnpilot_expt_750_p_scaffold_202_30
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32608..33291
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RN42_ACCPU rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV35409.1}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).
Displaying items 1-30 of 130 in total

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