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scnpilot_expt_750_p_scaffold_1046

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_p_scaffold_1046_1
unknown

Not on your lists

comp(1..462)
DNA (462bp) protein (154aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_1046_2
unknown

Not on your lists

comp(487..1071)
DNA (585bp) protein (195aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_1046_3
unknown

Not on your lists

comp(1092..1646)
DNA (555bp) protein (185aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_1046_4
unknown

Not on your lists

comp(1689..2234)
DNA (546bp) protein (182aa)
hypothetical protein n=1 Tax=Pseudomonas mendocina RepID=UPI00036D22ED
scnpilot_expt_750_p_scaffold_1046_5
unknown

Not on your lists

comp(2236..3642)
DNA (1407bp) protein (469aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_1046_6
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3658..4692)
DNA (1035bp) protein (345aa)
hypothetical protein n=1 Tax=Rubritalea marina RepID=UPI000382431E
general secretion pathway protein f; K02455 general secretion pathway protein F Tax=GWE1_Burkholderiales_65_30_curated
general secretion pathway protein F
scnpilot_expt_750_p_scaffold_1046_7
Pseudomonas sp. BRH_c35, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4707..6641)
DNA (1935bp) protein (645aa)
hypothetical protein n=1 Tax=Pseudomonas mendocina RepID=UPI0003678BAC
Uncharacterized protein {ECO:0000313|EMBL:KJS33302.1}; TaxID=1629711 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. B
type ii secretion system protein e
scnpilot_expt_750_p_scaffold_1046_8
unknown

Not on your lists

comp(6651..7475)
DNA (825bp) protein (275aa)
hypothetical protein n=1 Tax=Pseudomonas mendocina RepID=UPI000366468A
scnpilot_expt_750_p_scaffold_1046_9
unknown

Not on your lists

comp(7537..8145)
DNA (609bp) protein (203aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_1046_10
unknown

Not on your lists

comp(8188..8304)
DNA (117bp) protein (39aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_1046_11
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8334..9377)
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa VRFPA07 RepID=V8ENE0_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:ETD53123.1}; TaxID=1431713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerug
scnpilot_expt_750_p_scaffold_1046_12
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9380..11377)
DNA (1998bp) protein (666aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa VRFPA07 RepID=V8ENF9_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:ETD53106.1}; TaxID=1431713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerug
scnpilot_expt_750_p_scaffold_1046_13
Burkholderia fungorum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11398..12642)
DNA (1245bp) protein (415aa)
toxin co-regulated pilus biosynthesis Q family protein
Toxin co-regulated pilus biosynthesis Q family protein {ECO:0000313|EMBL:AJZ56291.1}; TaxID=134537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderi
scnpilot_expt_750_p_scaffold_1046_14
Desulfotalea psychrophila, Desulfotalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12757..13740
DNA (984bp) protein (328aa)
Probable conjugal transfer protein TrbB n=1 Tax=Desulfotalea psychrophila (strain LSv54 / DSM 12343) RepID=Q6AIH1_DESPS
conjugal transfer protein TrbB
Probable conjugal transfer protein TrbB {ECO:0000313|EMBL:CAG37876.1}; TaxID=177439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfotalea.;" source=
scnpilot_expt_750_p_scaffold_1046_15
unknown

Not on your lists

13780..14169
DNA (390bp) protein (130aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_1046_16
unknown

Not on your lists

14189..14518
DNA (330bp) protein (110aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_1046_17
Burkholderia sacchari, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14575..17103
DNA (2529bp) protein (843aa)
CagE TrbE VirB component of type IV transporter system n=1 Tax=Methylovorus sp. (strain SIP3-4) RepID=C6XES2_METSD
Transporter {ECO:0000313|EMBL:KHD17765.1}; TaxID=159450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sacchari.;"
CagE TrbE VirB component of type IV transporter system
scnpilot_expt_750_p_scaffold_1046_18
unknown

Not on your lists

17122..17610
DNA (489bp) protein (163aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_1046_19
unknown

Not on your lists

17631..18095
DNA (465bp) protein (155aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_1046_20
CG_Mariprof_03, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18105..19352
DNA (1248bp) protein (416aa)
TraB n=1 Tax=Limnobacter sp. MED105 RepID=A6GUS7_9BURK
TraB family protein Tax=CG_Mariprof_03
traB; putative conjugal transfer protein traB
scnpilot_expt_750_p_scaffold_1046_21
unknown

Not on your lists

19435..19620
DNA (186bp) protein (62aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_1046_22
Methylophilaceae bacterium 11, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19562..20302
DNA (741bp) protein (247aa)
P-type conjugative transfer protein TrbJ n=1 Tax=Ralstonia pickettii (strain 12D) RepID=C6BF73_RALP1
Conjugal transfer/entry exclusion protein {ECO:0000313|EMBL:EUJ10563.1}; Flags: Precursor;; TaxID=1101195 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae.;" so
P-type conjugative transfer protein TrbJ
scnpilot_expt_750_p_scaffold_1046_23
unknown

Not on your lists

20321..20509
DNA (189bp) protein (63aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_1046_24
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20597..22081
DNA (1485bp) protein (495aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii (strain 12J) RepID=B2UDS2_RALPJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD28313.1}; Flags: Precursor;; TaxID=402626 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ra
scnpilot_expt_750_p_scaffold_1046_25
unknown

Not on your lists

22074..22646
DNA (573bp) protein (191aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_1046_26
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22712..23440
DNA (729bp) protein (243aa)
hypothetical protein n=1 Tax=Methylosarcina fibrata RepID=UPI00036ED5D7
Uncharacterized protein {ECO:0000313|EMBL:ETX01006.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
trbF; Conjugative transfer protein TrbF
scnpilot_expt_750_p_scaffold_1046_27
Candidatus Glomeribacter gigasporarum, Candidatus Glomeribacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23512..24351
DNA (840bp) protein (280aa)
P-type conjugative transfer protein TrbG n=1 Tax=Candidatus Glomeribacter gigasporarum BEG34 RepID=G2J8A6_9BURK
P-type conjugative transfer protein TrbG {ECO:0000313|EMBL:CCD29003.1}; TaxID=1070319 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Candidatus Glomeribacter
conjugal transfer protein TrbG
scnpilot_expt_750_p_scaffold_1046_28
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24348..25802
DNA (1455bp) protein (485aa)
Conjugation TrbI family protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1C0_HALNC
Putative domain of the Conjugation TrbI family protein {ECO:0000313|EMBL:CDW96083.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomona
conjugation TrbI family protein
scnpilot_expt_750_p_scaffold_1046_29
Burkholderia xenovorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25760..26269
DNA (510bp) protein (170aa)
Putative uncharacterized protein n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q141W7_BURXL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE29872.1}; TaxID=266265 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia xenov
scnpilot_expt_750_p_scaffold_1046_30
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26266..27363
DNA (1098bp) protein (366aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q11ZL4_POLSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE47278.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (stra
Displaying items 1-30 of 35 in total

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