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scnpilot_expt_750_p_scaffold_1112

Search features with annotation key words

Displaying 29 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_p_scaffold_1112_1
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(107..757)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1KB96_AZOSB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAL96102.1}; TaxID=62928 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. (strain BH72).
scnpilot_expt_750_p_scaffold_1112_2
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(754..1284)
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1KB97_AZOSB
hypothetical protein
Tax=BJP_IG2103_Dechloromonas_63_51
scnpilot_expt_750_p_scaffold_1112_3
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1399..2214
DNA (816bp) protein (272aa)
Putative formate dehydrogenase accessory protein n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1KB98_AZOSB rbh
fdhD; putative formate dehydrogenase accessory protein
Tax=BJP_IG2103_Dechloromonas_63_51
scnpilot_expt_750_p_scaffold_1112_4
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2211..2825
DNA (615bp) protein (205aa)
Molybdenum cofactor guanylyltransferase n=1 Tax=Azoarcus sp. KH32C RepID=H0PYI3_9RHOO
mobA; molybdopterin-guanine dinucleotide biosynthesis protein A
Tax=BJP_IG2103_Dechloromonas_63_51
scnpilot_expt_750_p_scaffold_1112_5
Thauera sp. 63, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2822..3724
DNA (903bp) protein (301aa)
Excisionase family DNA binding domain-containing protein n=1 Tax=Thauera sp. 63 RepID=N6X7N2_9RHOO rbh
Excisionase family DNA binding domain-containing protein {ECO:0000313|EMBL:ENO75185.1}; TaxID=497321 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" so
excisionase family DNA binding domain-containing protein
scnpilot_expt_750_p_scaffold_1112_6
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3904..6252
DNA (2349bp) protein (783aa)
Multimodular transpeptidase-transglycosylase (EC:2.4.1.129 3.4.-.-)
Cupriavidus basilensis strain 4G11 chromosome secondary, complete sequence {ECO:0000313|EMBL:AJG21930.1}; EC=2.4.1.129 {ECO:0000313|EMBL:AJG21930.1};; EC=3.4.-.- {ECO:0000313|EMBL:AJG21930.1};; TaxID=
hypothetical protein, partial n=1 Tax=Cupriavidus sp. WS RepID=UPI0003600A77 rbh
scnpilot_expt_750_p_scaffold_1112_7
Burkholderia phytofirmans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6381..7292)
DNA (912bp) protein (304aa)
Transcriptional regulator, LysR family n=1 Tax=Burkholderia phytofirmans (strain DSM 17436 / PsJN) RepID=B2T4N9_BURPP rbh
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ACD16550.1}; TaxID=398527 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Bur
scnpilot_expt_750_p_scaffold_1112_8
Collimonas fungivorans, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7414..8163
DNA (750bp) protein (250aa)
Membrane protein, putative n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0AA38_COLFT rbh
hypothetical protein
Membrane protein, putative {ECO:0000313|EMBL:AEK62972.1}; TaxID=1005048 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas fungi
scnpilot_expt_750_p_scaffold_1112_9
unknown

Not on your lists

8194..8367
DNA (174bp) protein (58aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_1112_10
unknown

Not on your lists

8846..8992
DNA (147bp) protein (49aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_1112_11
Limnobacter sp. MED105, Limnobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9155..10054)
DNA (900bp) protein (300aa)
Transcriptional regulator, LysR family protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GLG7_9BURK rbh
Transcriptional regulator, LysR family protein {ECO:0000313|EMBL:EDM84848.1}; TaxID=391597 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Limnobacter.;" sour
transcriptional regulator, LysR family
scnpilot_expt_750_p_scaffold_1112_12
Burkholderia jiangsuensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10167..11333
DNA (1167bp) protein (389aa)
Mandelate racemase/muconate lactonizing protein n=1 Tax=Burkholderia cenocepacia (strain MC0-3) RepID=B1JWY1_BURCC rbh
Mandelate racemase {ECO:0000313|EMBL:KAK44279.1}; TaxID=1458357 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia jiangsuen
mandelate racemase/muconate lactonizing protein
scnpilot_expt_750_p_scaffold_1112_13
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11469..11996)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RR16_ACCPU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV35697.1}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).
scnpilot_expt_750_p_scaffold_1112_14
Candidatus Accumulibacter sp. SK-11, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12167..14080)
DNA (1914bp) protein (638aa)
Chaperone protein HtpG n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RR15_ACCPU rbh
heat shock protein 90
Chaperone protein HtpG {ECO:0000256|HAMAP-Rule:MF_00505, ECO:0000256|SAAS:SAAS00218406}; Heat shock protein HtpG {ECO:0000256|HAMAP-Rule:MF_00505}; High temperature protein G {ECO:0000256|HAMAP-Rule:M
scnpilot_expt_750_p_scaffold_1112_15
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14246..16429)
DNA (2184bp) protein (728aa)
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QH06_AZOSU
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein rbh
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:AEV27339.1}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae;
scnpilot_expt_750_p_scaffold_1112_16
Candidatus Accumulibacter sp. BA-94, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16426..17001)
DNA (576bp) protein (192aa)
Transcription elongation factor GreB n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QH07_AZOSU
Transcription elongation factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; Transcript cleavage factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; TaxID=1454005 species="Bacteria; Proteobacteria; Betaproteoba
transcription elongation factor GreB
scnpilot_expt_750_p_scaffold_1112_17
Candidatus Accumulibacter sp. BA-91, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17096..17761)
DNA (666bp) protein (222aa)
(NiFe) hydrogenase assembly chaperone, HybE family n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QH08_AZOSU
Hydrogenase-2 operon protein HybE {ECO:0000313|EMBL:KFB71759.1}; TaxID=1454002 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp.
(NiFe) hydrogenase assembly chaperone, HybE family
scnpilot_expt_750_p_scaffold_1112_18
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17802..18107)
DNA (306bp) protein (102aa)
Hydrogenase expression/formation protein (HUPF/HYPC) n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RPY9_ACCPU
Hydrogenase assembly chaperone HypC/HupF {ECO:0000313|EMBL:EXI90666.1}; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibac
hydrogenase expression/formation protein HypC/HupF
scnpilot_expt_750_p_scaffold_1112_19
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18107..18658)
DNA (552bp) protein (184aa)
Hydrogenase maturation protease n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RPZ0_ACCPU
hydrogenase maturation protease
Hydrogenase maturation protease {ECO:0000313|EMBL:ACV35576.1}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strai
scnpilot_expt_750_p_scaffold_1112_20
Candidatus Accumulibacter sp. SK-02, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18658..20361)
DNA (1704bp) protein (568aa)
Hydrogenase-2 large chain {ECO:0000313|EMBL:KFB76867.1}; EC=1.12.99.6 {ECO:0000313|EMBL:KFB76867.1};; TaxID=1453999 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;"
Nickel-dependent hydrogenase large subunit n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RPZ1_ACCPU rbh
nickel-dependent hydrogenase large subunit rbh
scnpilot_expt_750_p_scaffold_1112_21
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20386..21567)
DNA (1182bp) protein (394aa)
Polysulphide reductase, NrfD n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q478N2_DECAR rbh
hydrogenase 2 b cytochrome subunit
Tax=BJP_IG2103_Dechloromonas_63_51
scnpilot_expt_750_p_scaffold_1112_22
Candidatus Accumulibacter sp. SK-02, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21570..22613)
DNA (1044bp) protein (348aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RPZ8_ACCPU rbh
Formate dehydrogenase-N subunit beta {ECO:0000313|EMBL:KFB76869.1}; TaxID=1453999 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter
hydrogenase 2 protein HybA
scnpilot_expt_750_p_scaffold_1112_23
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22615..23796)
DNA (1182bp) protein (394aa)
hydrogenase (NiFe) small subunit HydA (EC:1.12.99.6)
Hydrogenase (NiFe) small subunit HydA {ECO:0000313|EMBL:ACV35585.1}; EC=1.12.99.6 {ECO:0000313|EMBL:ACV35585.1};; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumul
Hydrogenase (NiFe) small subunit HydA n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RPZ9_ACCPU rbh
scnpilot_expt_750_p_scaffold_1112_24
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24086..24406)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RR13_ACCPU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV35694.1}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).
scnpilot_expt_750_p_scaffold_1112_25
BJP_IG2103_Dechloromonas_60_92, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24653..24865
DNA (213bp) protein (71aa)
Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47H01_DECAR
hypothetical protein
Tax=BJP_IG2103_Dechloromonas_60_92
scnpilot_expt_750_p_scaffold_1112_26
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24978..25985)
DNA (1008bp) protein (336aa)
Phosphate transporter n=1 Tax=gamma proteobacterium HdN1 RepID=E1VJ59_9GAMM rbh
phosphate transporter
Phosphate transporter {ECO:0000313|EMBL:CBL44851.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
scnpilot_expt_750_p_scaffold_1112_27
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25998..26636)
DNA (639bp) protein (213aa)
Phosphate transport regulator related to PhoU n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QHG6_AZOSU rbh
phosphate transport regulator related to PhoU
Phosphate transport regulator related to PhoU {ECO:0000313|EMBL:AEV27359.1}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azos
scnpilot_expt_750_p_scaffold_1112_28
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26795..27181)
DNA (387bp) protein (129aa)
Cytochrome c, mono-and diheme variants family n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QNU0_AZOSU
cytochrome c, mono- and diheme variants family
Tax=BJP_IG2103_Dechloromonas_63_51
scnpilot_expt_750_p_scaffold_1112_29
GWA2_Desulfovibrionales_65_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27595..27696)
DNA (102bp) protein (34aa)
Heavy metal efflux pump CzcA n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47DS9_DECAR
hypothetical protein; K07787 Cu(I)/Ag(I) efflux system membrane protein CusA Tax=GWA2_Desulfovibrionales_65_9_curated
heavy metal efflux pump CzcA
Displaying 29 items

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