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scnpilot_expt_750_p_scaffold_1262

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Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_p_scaffold_1262_1
unknown

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1..90
DNA (90bp) protein (30aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_1262_2
Acinetobacter venetianus, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(171..3125)
DNA (2955bp) protein (985aa)
Uncharacterized protein n=1 Tax=Acinetobacter venetianus RAG-1 = CIP 110063 RepID=N8YK01_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:ENV37117.1}; TaxID=1191460 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter sp.
transposase, TnpA family
scnpilot_expt_750_p_scaffold_1262_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3221..6337)
DNA (3117bp) protein (1039aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI0003814170
heavy metal efflux pump, cobalt-zinc-cadmium
Heavy metal efflux pump, cobalt-zinc-cadmium {ECO:0000313|EMBL:AGG89163.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; R
scnpilot_expt_750_p_scaffold_1262_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6334..7374)
DNA (1041bp) protein (347aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00036D4873
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89162.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" sourc
scnpilot_expt_750_p_scaffold_1262_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7371..8780)
DNA (1410bp) protein (470aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00036F296B
outer membrane protein
Outer membrane protein {ECO:0000313|EMBL:AGG89161.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source
scnpilot_expt_750_p_scaffold_1262_6
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8938..10332)
DNA (1395bp) protein (465aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacil
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00037F7CA9
heavy metal sensor signal transduction histidine kinase
scnpilot_expt_750_p_scaffold_1262_7
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10337..11011)
DNA (675bp) protein (225aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00037FA685
Transcriptional activator protein czcR {ECO:0000313|EMBL:CDQ12289.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.
two component heavy metal response winged helix family transcriptional regulator
scnpilot_expt_750_p_scaffold_1262_8
Methylomonas denitrificans, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11046..12182)
DNA (1137bp) protein (379aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037FD6C4 rbh
Integrase {ECO:0000313|EMBL:KHD33340.1}; TaxID=1538553 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;" source="Methylomonas denitrificans.;"
Phage integrase
scnpilot_expt_750_p_scaffold_1262_9
Burkholderia sp. Ch1-1, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12368..13396
DNA (1029bp) protein (343aa)
Plasmid replication region DNA-binding protein n=1 Tax=Burkholderia sp. Ch1-1 RepID=I2IBC5_9BURK
Plasmid replication region DNA-binding protein {ECO:0000313|EMBL:EIF28027.1}; TaxID=243261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" sou
cointegrase resolution protein
scnpilot_expt_750_p_scaffold_1262_10
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13429..16401)
DNA (2973bp) protein (991aa)
Tn1696 transposase TnpA n=43 Tax=Proteobacteria RepID=C4NV11_ECOLX rbh
Transposase {ECO:0000313|EMBL:AJE44700.1}; Transposase Tn3 family protein {ECO:0000313|EMBL:BAP75821.1}; TaxID=571 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobact
transposase
scnpilot_expt_750_p_scaffold_1262_11
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16404..16961)
DNA (558bp) protein (186aa)
DNA-invertase n=41 Tax=Proteobacteria RepID=C4NV12_ECOLX rbh
transposon Tn21 resolvase
Resolvase {ECO:0000313|EMBL:AGE11243.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="C
scnpilot_expt_750_p_scaffold_1262_12
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17204..17539
DNA (336bp) protein (112aa)
Propeptide, PepSY amd peptidase M4 n=5 Tax=Bacteria RepID=A4JUZ6_BURVG
propeptide, PepSY amd peptidase M4
Propeptide, PepSY amd peptidase M4 {ECO:0000313|EMBL:EER59503.1}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;"
scnpilot_expt_750_p_scaffold_1262_13
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17596..18192
DNA (597bp) protein (199aa)
mmfB; UDP pyrophosphate phosphatase (EC:3.6.1.27)
Phosphoesterase PA-phosphatase related n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T7P4_ACIDE rbh
Phosphoesterase PA-phosphatase related {ECO:0000313|EMBL:EER59504.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovo
scnpilot_expt_750_p_scaffold_1262_14
Burkholderia sp. AU4i, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18262..19044
DNA (783bp) protein (261aa)
Uncharacterized protein n=7 Tax=Bacteria RepID=A4JUZ8_BURVG rbh
mmfC1; permease MFS
Integral membrane protein (Rhomboid family) {ECO:0000313|EMBL:ERJ35469.1}; TaxID=1335308 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkhol
scnpilot_expt_750_p_scaffold_1262_15
Burkholderia vietnamiensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19074..19526
DNA (453bp) protein (151aa)
Conserved hypothetical signal peptide protein n=1 Tax=Burkholderia vietnamiensis (strain G4 / LMG 22486) RepID=A4JUZ9_BURVG
putative signal peptide protein
Conserved hypothetical signal peptide protein {ECO:0000313|EMBL:ABO60102.1}; Flags: Precursor;; TaxID=269482 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; B
scnpilot_expt_750_p_scaffold_1262_16

Not on your lists

19543..20301
DNA (759bp) protein (253aa)
Uncharacterized protein n=4 Tax=Bacteria RepID=C5T7P7_ACIDE rbh
mmfC2; major facilitator superfamily permease
Uncharacterized protein {ECO:0000313|EMBL:AEV56853.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
scnpilot_expt_750_p_scaffold_1262_17
Burkholderia vietnamiensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20324..20989
DNA (666bp) protein (222aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Burkholderia vietnamiensis (strain G4 / LMG 22486) RepID=A4JV01_BURVG rbh
two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ABO60104.1}; Flags: Precursor;; TaxID=269482 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burk
scnpilot_expt_750_p_scaffold_1262_18
Burkholderia vietnamiensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20965..22317
DNA (1353bp) protein (451aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=269482 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Burkholderia vietnamiensis (strain G4 / LMG 22486) RepID=A4JV02_BURVG rbh
integral membrane sensor signal transduction histidine kinase rbh
scnpilot_expt_750_p_scaffold_1262_19
Burkholderia sp. AU4i, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22346..22777
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Burkholderia vietnamiensis AU4i RepID=U2FXP7_BURVI
Uncharacterized protein {ECO:0000313|EMBL:ERJ35465.1}; TaxID=1335308 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia comple
hypothetical protein
scnpilot_expt_750_p_scaffold_1262_20
Burkholderia vietnamiensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22844..23458)
DNA (615bp) protein (205aa)
Resolvase, N-terminal domain protein n=1 Tax=Burkholderia vietnamiensis (strain G4 / LMG 22486) RepID=A4JV07_BURVG rbh
resolvase domain-containing protein rbh
Resolvase, N-terminal domain protein {ECO:0000313|EMBL:ABO60110.1}; TaxID=269482 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia ce
scnpilot_expt_750_p_scaffold_1262_21
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23519..23677)
DNA (159bp) protein (53aa)
Transposase helper protein TniQ n=1 Tax=uncultured bacterium RepID=I6Z9S2_9BACT
TniQ protein {ECO:0000313|EMBL:GAO23400.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
tniQ family protein
Displaying 21 items

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