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scnpilot_expt_750_p_scaffold_294

Search features with annotation key words

Displaying items 1-30 of 103 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_p_scaffold_294_1
Rhodospirillum rubrum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(156..665)
DNA (510bp) protein (170aa)
Translation initiation factor IF-3 n=2 Tax=Rhodospirillum rubrum RepID=G2TE28_RHORU
translation initiation factor 3
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080}; TaxID=269796 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source
scnpilot_expt_750_p_scaffold_294_2
Rickettsia felis, Rickettsia, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(686..2602)
DNA (1917bp) protein (639aa)
thrS; threonyl-tRNA synthetase (EC:6.1.1.3)
Threonine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00184}; EC=6.1.1.3 {ECO:0000255|HAMAP-Rule:MF_00184};; Threonyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00184}; Short=ThrRS {ECO:0000255|HAMAP-Rule
Threonine--tRNA ligase n=1 Tax=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) RepID=SYT_RICFE rbh
scnpilot_expt_750_p_scaffold_294_3
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2602..3408)
DNA (807bp) protein (269aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EEV01496.1}; EC=2.4.-.- {ECO:0000313|EMBL:EEV01496.1};; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospira
Glycosyltransferase, group 2 family protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G9E6_9FIRM
glycosyl transferase 2 family protein
scnpilot_expt_750_p_scaffold_294_4
Gloeobacter kilaueensis, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

comp(3398..4366)
DNA (969bp) protein (323aa)
rfbB; dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=1183438 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.
dTDP-glucose 4,6-dehydratase n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QP94_9CYAN
scnpilot_expt_750_p_scaffold_294_5
Desulfurispirillum indicum, Desulfurispirillum, Chrysiogenales, Chrysiogenetes, Chrysiogenetes, Bacteria

Not on your lists

4381..5016
DNA (636bp) protein (212aa)
Tetratricopeptide TPR_1 repeat-containing protein n=1 Tax=Desulfurispirillum indicum (strain ATCC BAA-1389 / S5) RepID=E6W376_DESIS
tetratricopeptide repeat-containing protein
Tetratricopeptide TPR_1 repeat-containing protein {ECO:0000313|EMBL:ADU66830.1}; TaxID=653733 species="Bacteria; Chrysiogenetes; Chrysiogenales; Chrysiogenaceae; Desulfurispirillum.;" source="Desulfur
scnpilot_expt_750_p_scaffold_294_6
Rickettsiales bacterium Ac37b, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5070..7079
DNA (2010bp) protein (670aa)
Putative uncharacterized protein n=2 Tax=Rickettsia bellii RepID=A8GY71_RICB8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIL65767.1}; TaxID=1528098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales.;" source="Rickettsiales bacterium Ac37b.;"
scnpilot_expt_750_p_scaffold_294_7
Rickettsiales bacterium Ac37b, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(7139..8854)
DNA (1716bp) protein (572aa)
30S ribosomal protein S1 n=1 Tax=Azospirillum amazonense Y2 RepID=G1XYN4_9PROT
rpsA; Ribosomal protein S1 rbh
30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111}; TaxID=1528098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales.;" source="Rickettsiales bacterium Ac37b.;"
scnpilot_expt_750_p_scaffold_294_8
Acetobacter sp. CAG:977, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8913..9548)
DNA (636bp) protein (212aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:
Cytidylate kinase n=1 Tax=Acetobacter sp. CAG:977 RepID=R5QLL0_9PROT
cytidylate kinase
scnpilot_expt_750_p_scaffold_294_9
Rickettsiales bacterium Ac37b, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9535..10875)
DNA (1341bp) protein (447aa)
Probable protein kinase UbiB {ECO:0000256|SAAS:SAAS00063507}; EC=2.7.-.- {ECO:0000256|SAAS:SAAS00063486};; TaxID=1528098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales.;" source
2-polyprenylphenol 6-hydroxylase n=1 Tax=Rickettsia bellii (strain OSU 85-389) RepID=A8GXR3_RICB8 rbh
ubiB; putative ubiquinone biosynthesis protein UbiB rbh
scnpilot_expt_750_p_scaffold_294_10
Rickettsia bellii, Rickettsia, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10872..11627)
DNA (756bp) protein (252aa)
Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE {ECO:0000255|HAMAP-Rule:MF_01813}; EC=2.1.1.163 {ECO:0000255|HAMAP-Rule:MF_01813};; EC=2.1.1.201 {ECO:0000255|HAMAP-Rule:MF_01813};; 2-meth
Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE n=1 Tax=Rickettsia bellii (strain OSU 85-389) RepID=UBIE_RICB8
ubiE; ubiquinone/menaquinone biosynthesis methyltransferase
scnpilot_expt_750_p_scaffold_294_11
Saccharibacter sp. AM169, Saccharibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11636..12454
DNA (819bp) protein (273aa)
Formamidopyrimidine-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103, ECO:0000256|SAAS:SAAS00020854}; Short=Fapy-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000256|HAMAP-Rule
Formamidopyrimidine-DNA glycosylase n=1 Tax=Sagittula stellata E-37 RepID=A3K327_9RHOB
formamidopyrimidine-DNA glycosylase
scnpilot_expt_750_p_scaffold_294_12
unknown

Not on your lists

comp(12463..13386)
DNA (924bp) protein (308aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_294_13
Rickettsia bellii, Rickettsia, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13456..13932)
DNA (477bp) protein (159aa)
Putative uncharacterized protein n=2 Tax=Rickettsia bellii RepID=A8GXA6_RICB8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJV92224.1}; TaxID=1359194 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Rickettsiaceae; Rickettsieae; Rickettsia; belli group.;" sou
scnpilot_expt_750_p_scaffold_294_14
unknown

Not on your lists

comp(14000..14488)
DNA (489bp) protein (163aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_294_15
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14696..15718)
DNA (1023bp) protein (341aa)
OmpA family protein n=1 Tax=Micavibrio aeruginosavorus (strain ARL-13) RepID=G2KSK1_MICAA
Uncharacterized protein {ECO:0000313|EMBL:EWY37464.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella sti
ompA family protein
scnpilot_expt_750_p_scaffold_294_16
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15850..16806)
DNA (957bp) protein (319aa)
hypothetical protein n=1 Tax=Scytonema hofmanni RepID=UPI0003469AD9
Crp/Fnr family transcriptional regulator Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
bacteriophytochrome-like histidine kinase sensor and response regulator
scnpilot_expt_750_p_scaffold_294_17
R_Alphaproteobacteria_40_19, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16784..18175)
DNA (1392bp) protein (464aa)
Probable hybrid two-component system sensor histidine kinase and response regulator receiver n=1 Tax=Flavobacterium branchiophilum (strain FL-15) RepID=G2Z2H4_FLABF
PAS domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Alphaproteobacteria_40_19_curated
sensor histidine kinase/response regulator hybrid protein
scnpilot_expt_750_p_scaffold_294_18
Thermocrinis ruber, Thermocrinis, Aquificales, Aquificae, Aquificae, Bacteria

Not on your lists

18381..19304
DNA (924bp) protein (308aa)
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAM
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-137-I08 RepID=UPI000366C100
porphobilinogen deaminase
scnpilot_expt_750_p_scaffold_294_19
Rickettsia japonica, Rickettsia, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19393..19920
DNA (528bp) protein (176aa)
Ubiquinol-cytochrome c reductase iron-sulfur subunit {ECO:0000256|RuleBase:RU004494}; EC=1.10.2.2 {ECO:0000256|RuleBase:RU004494};; TaxID=652620 species="Bacteria; Proteobacteria; Alphaproteobacteria;
Ubiquinol-cytochrome c reductase iron-sulfur subunit n=1 Tax=Rickettsia japonica (strain ATCC VR-1363 / YH) RepID=G4KMJ7_RICJY
petA; ubiquinol-cytochrome c reductase, iron-sulfur subunit
scnpilot_expt_750_p_scaffold_294_20
endosymbiont of Acanthamoeba sp. UWC36, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19924..21144
DNA (1221bp) protein (407aa)
Cytochrome b n=1 Tax=Rickettsia bellii (strain OSU 85-389) RepID=A8GWY3_RICB8 rbh
Cytochrome b {ECO:0000256|RuleBase:RU003385}; TaxID=86105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Holosporaceae.;" source="endosymbiont of Acanthamoeba sp. UWC36.;"
cytochrome b rbh
scnpilot_expt_750_p_scaffold_294_21
Rickettsia endosymbiont of Ixodes scapularis, Rickettsia, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21146..21904
DNA (759bp) protein (253aa)
Cytochrome c1, putative n=2 Tax=cellular organisms RepID=B7P8B3_IXOSC rbh
Cytochrome c1, heme protein {ECO:0000313|EMBL:EER22066.1}; TaxID=444612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Rickettsiaceae; Rickettsieae; Rickettsia; spotted fever g
cytochrome c1, heme protein precursor
scnpilot_expt_750_p_scaffold_294_22
Rickettsia bellii, Rickettsia, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22442..24010
DNA (1569bp) protein (523aa)
Putative uncharacterized protein n=1 Tax=Rickettsia bellii (strain OSU 85-389) RepID=A8GW34_RICB8 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABE04696.1}; TaxID=336407 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Rickettsiaceae; Rickettsieae; Rickettsia; belli group.;" sour
scnpilot_expt_750_p_scaffold_294_23
unknown

Not on your lists

24030..24233
DNA (204bp) protein (68aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_294_24
Rickettsia felis, Rickettsia, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24518..25705
DNA (1188bp) protein (396aa)
Putative to amino acid permeases n=1 Tax=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) RepID=Q4UL60_RICFE
to amino acid permeases
Tryptophan/tyrosine permease family protein {ECO:0000313|EMBL:KJV59201.1}; TaxID=1359196 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Rickettsiaceae; Rickettsieae; Rickettsia
scnpilot_expt_750_p_scaffold_294_25
R_Gammaproteobacteria_37_34, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25855..27138
DNA (1284bp) protein (428aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2BSL2_9BACT rbh
major facilitator superfamily protein; K03762 MFS transporter, MHS family, proline/betaine transporter Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_37_34_curated
proP_1; Proline porter II
scnpilot_expt_750_p_scaffold_294_26
unknown

Not on your lists

27110..27610
DNA (501bp) protein (167aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_294_27
R_Coxiella_42_15, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27731..29500)
DNA (1770bp) protein (590aa)
multidrug ABC transporter n=1 Tax=Fluoribacter dumoffii RepID=UPI0002D44F21 rbh
abcT; ABC transporter ATP-binding protein; K06147 ATP-binding cassette, subfamily B, bacterial Tax=RIFCSPHIGHO2_12_FULL_Coxiella_42_15_curated
abcT; ABC transporter, ATP binding protein
scnpilot_expt_750_p_scaffold_294_28
Micavibrio aeruginosavorus, Micavibrio, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29624..31069)
DNA (1446bp) protein (482aa)
HtrA protease/chaperone protein n=1 Tax=Micavibrio aeruginosavorus EPB RepID=M4VVI2_9PROT
HtrA protease/chaperone protein
HtrA protease/chaperone protein {ECO:0000313|EMBL:AGH97219.1}; TaxID=349215 species="Bacteria; Proteobacteria; Alphaproteobacteria; Micavibrio.;" source="Micavibrio aeruginosavorus EPB.;"
scnpilot_expt_750_p_scaffold_294_29
Rickettsiales bacterium Ac37b, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31079..31933)
DNA (855bp) protein (285aa)
Protein HflC n=2 Tax=spotted fever group RepID=G0GWU7_RICH0
hflC; Modulator of FtsH protease HflC
Protein HflC {ECO:0000256|PIRNR:PIRNR005651}; TaxID=1528098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales.;" source="Rickettsiales bacterium Ac37b.;"
scnpilot_expt_750_p_scaffold_294_30
Rickettsiales bacterium Ac37b, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31943..33070)
DNA (1128bp) protein (376aa)
hypothetical protein n=1 Tax=alpha proteobacterium SCGC AAA280-P20 RepID=UPI0003742258
hflK; Modulator of FtsH protease HflK rbh
Modulator of FtsH protease HflK {ECO:0000313|EMBL:AIL65485.1}; TaxID=1528098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales.;" source="Rickettsiales bacterium Ac37b.;"
Displaying items 1-30 of 103 in total

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