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scnpilot_expt_750_p_scaffold_297

Search features with annotation key words

Displaying items 1-30 of 109 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_p_scaffold_297_1
unknown

Not on your lists

comp(2..232)
DNA (231bp) protein (77aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_297_2
marine gamma proteobacterium HTCC2143, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(370..1983)
DNA (1614bp) protein (538aa)
Uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YCZ3_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EAW31096.1}; TaxID=247633 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; BD1-7 clade.;" source="marine gamma proteobacterium HTCC2143.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_297_3
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1974..2540)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WUP7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ36292.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-31
hypothetical protein
scnpilot_expt_750_p_scaffold_297_4
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2537..2851)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AZ84_AZOBR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCD03243.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum b
scnpilot_expt_750_p_scaffold_297_5
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2860..3054)
DNA (195bp) protein (65aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-133-G06 RepID=UPI00036A0CF4
Uncharacterized protein {ECO:0000313|EMBL:EFV43490.1}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wads
transcriptional regulator
scnpilot_expt_750_p_scaffold_297_6
unknown

Not on your lists

comp(3213..4520)
DNA (1308bp) protein (436aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_297_7
Blastopirellula marina, Blastopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(4540..5709)
DNA (1170bp) protein (390aa)
Probable cp4-like integrase protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZP16_9PLAN rbh
Probable cp4-like integrase protein {ECO:0000313|EMBL:EAQ81490.1}; TaxID=314230 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blast
phage integrase family protein
scnpilot_expt_750_p_scaffold_297_8
Fulvimarina pelagi, Fulvimarina, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6221..6904)
DNA (684bp) protein (228aa)
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000256|HAMAP-Rule:MF_01708}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01708};; TaxID=314231 species="Bacteria; Proteobacteria; Alphaproteobacte
ABC transporter ATP-binding protein n=1 Tax=Methylocystis parvus RepID=UPI000310C677
ABC transporter
scnpilot_expt_750_p_scaffold_297_9
R_Alphaproteobacteria_40_19, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6897..8147)
DNA (1251bp) protein (417aa)
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI0003725384
LolC/E family lipoprotein releasing system, transmembrane protein; K09808 lipoprotein-releasing system permease protein Tax=RIFCSPLOWO2_02_FULL_Alphaproteobacteria_40_19_curated
lolC; Lipoprotein-releasing system transmembrane protein lolC
scnpilot_expt_750_p_scaffold_297_10
unknown

Not on your lists

8294..10969
DNA (2676bp) protein (892aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_297_11
Pseudoalteromonas piscicida, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10966..11427)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Pseudoalteromonas piscicida JCM 20779 RepID=U1JYT8_PSEO7
Ribosomal protein S6 modification protein {ECO:0000313|EMBL:KJZ03213.1}; TaxID=43662 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.
Ribosomal protein S6 modification protein
scnpilot_expt_750_p_scaffold_297_12
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11515..12000)
DNA (486bp) protein (162aa)
Smr protein/MutS2 n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IC77_BEII9
Smr protein/MutS2 {ECO:0000313|EMBL:ACB96674.1}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp.
Smr protein/MutS2
scnpilot_expt_750_p_scaffold_297_13
Rickettsiales bacterium Ac37b, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12091..12948
DNA (858bp) protein (286aa)
RNA polymerase sigma factor RpoH n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RPR2_9PROT
rpoH; RNA polymerase sigma-32 factor
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1528098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales.;" source="Rickettsiales bacterium Ac37b.;"
scnpilot_expt_750_p_scaffold_297_14
CG_Proteo_01, Proteobacteria, Bacteria

Not on your lists

comp(12960..13910)
DNA (951bp) protein (317aa)
Ferredoxin--NAD(+) reductase n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3IQT0_9GAMM
ferredoxin reductase Tax=CG_Proteo_01
oxygenase
scnpilot_expt_750_p_scaffold_297_15
Tatlockia micdadei, Tatlockia, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13912..14268)
DNA (357bp) protein (119aa)
globin n=1 Tax=Legionella shakespearei RepID=UPI0003636CB1
Group 1 truncated hemoglobin
Group 1 truncated hemoglobin {ECO:0000313|EMBL:CEG62099.1}; TaxID=451 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Tatlockia.;" source="Tatlockia micdadei (Le
scnpilot_expt_750_p_scaffold_297_16
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14416..15186
DNA (771bp) protein (257aa)
ABC transporter n=1 Tax=Thalassospira xiamenensis M-5 = DSM 17429 RepID=K2MA62_9PROT
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter e
ABC transporter
scnpilot_expt_750_p_scaffold_297_17
endosymbiont of Acanthamoeba sp. UWC36, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15188..15622
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Meganema perideroedes RepID=UPI00037BCD55
coproporphyrinogen III oxidase
UPF0093 membrane protein {ECO:0000313|EMBL:KIE06186.1}; TaxID=86105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Holosporaceae.;" source="endosymbiont of Acanthamoeba sp. UWC
scnpilot_expt_750_p_scaffold_297_18
Rickettsiales bacterium Ac37b, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15723..17051
DNA (1329bp) protein (443aa)
rho; Transcription termination factor Rho (EC:3.6.4.-) rbh
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1528098 speci
Transcription termination factor Rho n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2VYG8_MAGSA
scnpilot_expt_750_p_scaffold_297_19
Rickettsiales bacterium Ac37b, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17074..18030
DNA (957bp) protein (319aa)
mdh_2; Malate dehydrogenase (EC:1.1.1.37) rbh
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00487, ECO:0000256|SAAS:SAAS00057904}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00487, ECO:0000256|SAAS:SAAS00057904};; TaxID=1528098 species="Bacteria; P
Malate dehydrogenase n=2 Tax=Micavibrio aeruginosavorus RepID=G2KP76_MICAA
scnpilot_expt_750_p_scaffold_297_20
Rickettsiales bacterium Ac37b, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18053..19225
DNA (1173bp) protein (391aa)
sucC; Succinyl-CoA ligase [ADP-forming] subunit beta (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000256|HAMAP-Rule:MF_00558};
Succinyl-CoA ligase [ADP-forming] subunit beta n=1 Tax=Rickettsia monacensis IrR/Munich RepID=U6EHF1_9RICK rbh
scnpilot_expt_750_p_scaffold_297_21
Rickettsia bellii, Rickettsia, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19228..20106
DNA (879bp) protein (293aa)
succinyl-CoA synthetase subunit alpha (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=1359193 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rick
Succinyl-CoA ligase [ADP-forming] subunit alpha n=1 Tax=Rickettsia bellii (strain OSU 85-389) RepID=A8GUV1_RICB8 rbh
scnpilot_expt_750_p_scaffold_297_22
Rickettsiales bacterium Ac37b, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20119..22953
DNA (2835bp) protein (945aa)
sucA; 2-oxoglutarate dehydrogenase E1 component (EC:1.2.4.2)
2-oxoglutarate dehydrogenase E1 component {ECO:0000313|EMBL:AIL65300.1}; EC=1.2.4.2 {ECO:0000313|EMBL:AIL65300.1};; TaxID=1528098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales.
2-oxoglutarate dehydrogenase E1 component n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TQ06_TISMK
scnpilot_expt_750_p_scaffold_297_23
Rickettsiales bacterium Ac37b, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22965..24140
DNA (1176bp) protein (392aa)
sucB; Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex (EC:2.3.1.61) rbh
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex; EC=2.3.1.61;; 2-oxoglutarate dehydrogenase complex component E2 {ECO:0000256|RuleBase:RU361138}; TaxI
2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IPE8_RHOCS
scnpilot_expt_750_p_scaffold_297_24
endosymbiont of Acanthamoeba sp. UWC8, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24201..25613
DNA (1413bp) protein (471aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=86106 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Holosporace
dihydrolipoamide dehydrogenase n=1 Tax=Roseomonas sp. B5 RepID=UPI0002ECCEF8
dihydrolipoamide dehydrogenase rbh
scnpilot_expt_750_p_scaffold_297_25
Algibacter lectus, Algibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

25658..25819
DNA (162bp) protein (54aa)
hypothetical protein n=1 Tax=Spirosoma luteum RepID=UPI00036ED9C5
Uncharacterized protein {ECO:0000313|EMBL:GAL80346.1}; TaxID=221126 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Algibacter.;" source="Algibacter lectus.;"
Uncharacterized conserved protein UCP037205
scnpilot_expt_750_p_scaffold_297_26
Pseudanabaena sp. PCC 7367, Pseudanabaena, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

25812..26513
DNA (702bp) protein (234aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Pseudanabaena sp. PCC 7367 RepID=K9SKT1_9CYAN
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:AFY70803.1}; TaxID=82654 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Pseudanabaena.;" source="Pseudanabaena sp.
scnpilot_expt_750_p_scaffold_297_27
unknown

Not on your lists

26627..27784
DNA (1158bp) protein (386aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_297_28
Capnocytophaga sp. oral taxon 332, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27821..28540)
DNA (720bp) protein (240aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=1127692 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriac
undecaprenyl diphosphate synthase (EC:2.5.1.31)
Isoprenyl transferase n=1 Tax=Capnocytophaga sp. oral taxon 332 str. F0381 RepID=L1NRH3_9FLAO
scnpilot_expt_750_p_scaffold_297_29
Rickettsiales bacterium Ac37b, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28546..29109)
DNA (564bp) protein (188aa)
Ribosome-recycling factor n=2 Tax=Rickettsia bellii RepID=RRF_RICB8
frr; Vegetative protein 12B
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=1528098 species="Bacteria;
scnpilot_expt_750_p_scaffold_297_30
Clostridium tyrobutyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29188..30492)
DNA (1305bp) protein (435aa)
ammonia channel protein n=1 Tax=Clostridium tyrobutyricum RepID=UPI0002E61A2D
Ammonium transporter {ECO:0000256|RuleBase:RU362002, ECO:0000313|EMBL:CDL90525.1}; TaxID=1408889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostr
ammonia channel protein
Displaying items 1-30 of 109 in total

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