ggKbase home page

scnpilot_expt_750_p_scaffold_716

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_p_scaffold_716_1
unknown

Not on your lists

comp(93..506)
DNA (414bp) protein (138aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_716_2
Rickettsiales bacterium Ac37b, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(622..1398)
DNA (777bp) protein (259aa)
map; Methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974
Methionine aminopeptidase n=1 Tax=Rickettsia bellii (strain RML369-C) RepID=Q1RK77_RICBR rbh
scnpilot_expt_750_p_scaffold_716_3
Thalassospira permensis, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1488..2249
DNA (762bp) protein (254aa)
Molybdopterin binding domain-containing protein n=1 Tax=Thalassospira xiamenensis M-5 = DSM 17429 RepID=K2LQL6_9PROT
hypothetical protein
Molybdenum cofactor biosynthesis protein {ECO:0000313|EMBL:KEO59451.1}; TaxID=1353532 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" sour
scnpilot_expt_750_p_scaffold_716_4
Candidatus Puniceispirillum marinum, Candidatus Puniceispirillum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2249..3241
DNA (993bp) protein (331aa)
Tryptophanyl-tRNA synthetase, class Ib (EC:6.1.1.2)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {EC
Tryptophan--tRNA ligase n=1 Tax=Puniceispirillum marinum (strain IMCC1322) RepID=D5BU92_PUNMI
scnpilot_expt_750_p_scaffold_716_5
Desulfotalea psychrophila, Desulfotalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3386..6040
DNA (2655bp) protein (885aa)
Related to two-component system sensory/regulatory protein (Hybrid family) n=1 Tax=Desulfotalea psychrophila (strain LSv54 / DSM 12343) RepID=Q6AKV4_DESPS rbh
two-component system sensory/regulatory protein
Related to two-component system sensory/regulatory protein (Hybrid family) {ECO:0000313|EMBL:CAG37021.1}; TaxID=177439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulf
scnpilot_expt_750_p_scaffold_716_6
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6065..7207)
DNA (1143bp) protein (381aa)
spermidine/putrescine transport system ATP-binding protein id=4886487 bin=GWC2_Alphaproteobacteria_42_16 species=Candidatus Odyssella thessalonicensis genus=Candidatus Odyssella taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
potG; putrescine ABC transporter, ATP-binding protein Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
potG; putrescine transport ATP-binding protein PotG
scnpilot_expt_750_p_scaffold_716_7
Rickettsiales bacterium Ac37b, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7272..8045)
DNA (774bp) protein (258aa)
Biotin--protein ligase n=1 Tax=Rickettsia canadensis (strain McKiel) RepID=A8EYR8_RICCK
birA; Bifunctional protein BirA
Bifunctional protein BirA {ECO:0000313|EMBL:AIL65958.1}; TaxID=1528098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales.;" source="Rickettsiales bacterium Ac37b.;"
scnpilot_expt_750_p_scaffold_716_8
endosymbiont of Acanthamoeba sp. UWC8, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8076..9527)
DNA (1452bp) protein (484aa)
NADH:ubiquinone oxidoreductase subunit N (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_00445};; NADH dehydrogenase I subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; NDH-1 subunit
NADH:ubiquinone oxidoreductase subunit N n=1 Tax=Bradyrhizobium japonicum RepID=UPI000363F558
scnpilot_expt_750_p_scaffold_716_9
Rickettsia prowazekii, Rickettsia, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9534..11093)
DNA (1560bp) protein (520aa)
NADH:ubiquinone oxidoreductase subunit M (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit M; EC=1.6.5.11;; NADH dehydrogenase I subunit M; NDH-1 subunit M; TaxID=272947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Rickettsiaceae
NADH-quinone oxidoreductase subunit M n=9 Tax=Rickettsia prowazekii RepID=NUOM_RICPR rbh
scnpilot_expt_750_p_scaffold_716_10
Rickettsiales bacterium SCGC AAA041-L04, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11098..13023)
DNA (1926bp) protein (642aa)
NADH-quinone oxidoreductase subunit L {ECO:0000313|EMBL:KKB96736.1}; EC=1.6.99.5 {ECO:0000313|EMBL:KKB96736.1};; TaxID=1607817 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales.;"
putative NADH:ubiquinone oxidoreductase, membrane subunit L (EC:1.6.99.5)
Putative NADH:ubiquinone oxidoreductase, membrane subunit L n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F2L5_9PROT rbh
scnpilot_expt_750_p_scaffold_716_11
Candidatus Paracaedibacter acanthamoebae, Candidatus Paracaedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13027..13350)
DNA (324bp) protein (108aa)
NADH-quinone oxidoreductase subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01456};; NADH dehydrogenase I subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; NDH-1 subunit
NADH-quinone oxidoreductase n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225BEA3
NADH-quinone oxidoreductase subunit K
scnpilot_expt_750_p_scaffold_716_12
Rickettsiales bacterium Ac37b, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13340..13969)
DNA (630bp) protein (210aa)
nuoJ; NADH-quinone oxidoreductase subunit J (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit J {ECO:0000313|EMBL:AIL65953.1}; EC=1.6.99.5 {ECO:0000313|EMBL:AIL65953.1};; TaxID=1528098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales.;"
NADH:ubiquinone oxidoreductase subunit J n=1 Tax=Pseudochrobactrum sp. AO18b RepID=UPI0003AA7A1E
scnpilot_expt_750_p_scaffold_716_13
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13973..14455)
DNA (483bp) protein (161aa)
NADH-quinone oxidoreductase subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01351};; NADH dehydrogenase I subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; NDH-1 subunit
NADH dehydrogenase subunit I (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit I n=1 Tax=Oceanibaculum indicum P24 RepID=K2JT94_9PROT
scnpilot_expt_750_p_scaffold_716_14
Rickettsiales bacterium SCGC AAA041-L04, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14468..15469)
DNA (1002bp) protein (334aa)
NADH-quinone oxidoreductase subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01350};; NADH dehydrogenase I subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; NDH-1 subunit
NADH:ubiquinone oxidoreductase subunit H (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit H n=1 Tax=Rickettsia montanensis (strain OSU 85-930) RepID=H8KAG0_RICMS rbh
scnpilot_expt_750_p_scaffold_716_15
Rickettsiales bacterium Ac37b, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15470..17518)
DNA (2049bp) protein (683aa)
nqo3; NADH-quinone oxidoreductase chain 3 (EC:1.6.99.5)
NADH-quinone oxidoreductase chain 3 {ECO:0000313|EMBL:AIL65950.1}; EC=1.6.99.5 {ECO:0000313|EMBL:AIL65950.1};; TaxID=1528098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales.;" so
NADH-quinone oxidoreductase, subunit G n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AKV1_AZOBR
scnpilot_expt_750_p_scaffold_716_16
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17532..18806)
DNA (1275bp) protein (425aa)
NADH-quinone oxidoreductase chain F (EC:1.6.5.3)
NADH dehydrogenase I subunit F (EC:1.6.5.3); K00335 NADH-quinone oxidoreductase subunit F [EC:1.6.5.3] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
NADH dehydrogenase n=1 Tax=Novispirillum itersonii RepID=UPI0003789CA3
scnpilot_expt_750_p_scaffold_716_17
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18809..19417)
DNA (609bp) protein (203aa)
nuoE; NADH-quinone oxidoreductase chain E (NADH dehydrogenase I, chain E) (NDH-1, chain E) (EC:1.6.5.3)
NADH-quinone oxidoreductase, subunit E n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2LCD4_9PROT
NADH dehydrogenase {ECO:0000313|EMBL:EWY42116.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiire
scnpilot_expt_750_p_scaffold_716_18
Rickettsiales bacterium SCGC AAA041-L04, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19414..20595)
DNA (1182bp) protein (394aa)
NADH-quinone oxidoreductase subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01358};; NADH dehydrogenase I subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; NDH-1 subunit
nuoD; NADH-quinone oxidoreductase subunit D (EC:1.6.99.5) rbh
NADH dehydrogenase subunit D n=1 Tax=Rickettsiaceae bacterium Os18 RepID=UPI0003742FBE rbh
scnpilot_expt_750_p_scaffold_716_19
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20606..21208)
DNA (603bp) protein (201aa)
NADH dehydrogenase subunit C (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit C {ECO:0000255|HAMAP-Rule:MF_01357}; EC=1.6.5.11 {ECO:0000255|HAMAP-Rule:MF_01357};; NADH dehydrogenase I subunit C {ECO:0000255|HAMAP-Rule:MF_01357}; NDH-1 subunit
NADH-quinone oxidoreductase subunit C n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=NUOC_RHILO
scnpilot_expt_750_p_scaffold_716_20
SAR116 cluster alpha proteobacterium HIMB100, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21198..21755)
DNA (558bp) protein (186aa)
NADH-quinone oxidoreductase subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01356};; NADH dehydrogenase I subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; NDH-1 subunit
NADH:ubiquinone oxidoreductase 20 kD subunit-like protein (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit B n=1 Tax=SAR116 cluster alpha proteobacterium HIMB100 RepID=G5ZVS4_9PROT rbh
scnpilot_expt_750_p_scaffold_716_21
Rickettsiales bacterium SCGC AAA041-L04, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21758..22132)
DNA (375bp) protein (125aa)
NADH-quinone oxidoreductase subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01394};; NADH dehydrogenase I subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NDH-1 subunit
nuoA; NADH dehydrogenase subunit A (EC:1.6.5.3 1.6.99.5)
NADH-quinone oxidoreductase subunit A n=1 Tax=alpha proteobacterium BAL199 RepID=A8TKZ9_9PROT
scnpilot_expt_750_p_scaffold_716_22
Pseudovibrio sp. JE062, Pseudovibrio, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22300..22851
DNA (552bp) protein (184aa)
ATP-dependent protease subunit HslV {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019556}; EC=3.4.25.2 {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019493};; TaxID=439495 specie
hypothetical protein n=1 Tax=Kordiimonas gwangyangensis RepID=UPI00037815D9
hslV; ATP-dependent protease peptidase subunit HslV
scnpilot_expt_750_p_scaffold_716_23
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22838..24172
DNA (1335bp) protein (445aa)
ATP-dependent protease ATPase subunit HslU n=2 Tax=Rhizobium loti RepID=HSLU_RHILO
hslU; ATP-dependent protease ATP-binding protein HslU
ATP-dependent protease ATPase subunit HslU {ECO:0000255|HAMAP-Rule:MF_00249}; Unfoldase HslU {ECO:0000255|HAMAP-Rule:MF_00249}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhi
scnpilot_expt_750_p_scaffold_716_24
unknown

Not on your lists

24182..24835
DNA (654bp) protein (218aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_716_25
Rickettsiales bacterium SCGC AAA041-L04, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25122..25919)
DNA (798bp) protein (266aa)
Thiol:disulfide interchange protein dsbA n=1 Tax=Rickettsia bellii (strain OSU 85-389) RepID=A8GWR9_RICB8
Disulfide bond formation protein D {ECO:0000313|EMBL:KKB96046.1}; TaxID=1607817 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales.;" source="Rickettsiales bacterium SCGC AAA041-L04
thiol:disulfide interchange protein DsbA
scnpilot_expt_750_p_scaffold_716_26
Rickettsiales bacterium Ac37b, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25991..26905)
DNA (915bp) protein (305aa)
Putative NAD dependent epimerase/dehydratase family protein n=2 Tax=root RepID=B3TCU3_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIL65503.1}; TaxID=1528098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales.;" source="Rickettsiales bacterium Ac37b.;"
scnpilot_expt_750_p_scaffold_716_27
endosymbiont of Acanthamoeba sp. UWC36, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26932..27660)
DNA (729bp) protein (243aa)
3-oxoacyl-(Acyl-carrier protein) reductase n=1 Tax=Candidatus Pelagibacter sp. HTCC7211 RepID=B6BSB3_9PROT
Short chain dehydrogenase {ECO:0000313|EMBL:KIE04465.1}; TaxID=86105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Holosporaceae.;" source="endosymbiont of Acanthamoeba sp. UW
putative short-chain dehydrogenase/reductase
scnpilot_expt_750_p_scaffold_716_28
Rickettsiales bacterium Ac37b, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27749..29452
DNA (1704bp) protein (568aa)
Glutathione-regulated potassium-efflux system protein KefB n=1 Tax=Rickettsia bellii (strain RML369-C) RepID=Q1RKL6_RICBR rbh
kefC; K(+)/H(+) antiporter rbh
Glutathione-regulated potassium-efflux system protein KefC {ECO:0000313|EMBL:AIL66106.1}; TaxID=1528098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales.;" source="Rickettsiales b
scnpilot_expt_750_p_scaffold_716_29
Rickettsiales bacterium SCGC AAA041-L04, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29459..30838
DNA (1380bp) protein (460aa)
DNA repair protein radA n=1 Tax=alpha proteobacterium BAL199 RepID=A8U1S8_9PROT
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=1607817 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales.;" source="Rickettsiales bacterium SCGC AAA041-L04.;"
DNA repair protein RadA rbh
scnpilot_expt_750_p_scaffold_716_30
Holospora obtusa, Holospora, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30845..31408
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Holospora obtusa RepID=UPI0003AEDAAD
NUDIX domain protein {ECO:0000313|EMBL:ETZ07358.1}; TaxID=1399147 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Holosporaceae; Holospora.;" source="Holospora obtusa F1.;"
NUDIX hydrolase
Displaying items 1-30 of 44 in total

View Taxonomy