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scnpilot_expt_750_p_scaffold_1389

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_p_scaffold_1389_1
unknown

Not on your lists

2..157
DNA (156bp) protein (52aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_1389_2
unknown

Not on your lists

177..2843
DNA (2667bp) protein (889aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_1389_3
unknown

Not on your lists

comp(2874..4247)
DNA (1374bp) protein (458aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_1389_4
unknown

Not on your lists

comp(7740..10979)
DNA (3240bp) protein (1080aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_1389_5
Candidatus Midichloria mitochondrii, Candidatus Midichloria, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11202..11558)
DNA (357bp) protein (119aa)
50S ribosomal protein L20 n=2 Tax=Candidatus Midichloria mitochondrii RepID=F7XW15_MIDMI
rplT; 50S ribosomal protein L20
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=234827 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Candidatus Midichloriace
scnpilot_expt_750_p_scaffold_1389_6
Labrenzia sp. C1B10, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(11562..11771)
DNA (210bp) protein (70aa)
50S ribosomal protein L35 n=2 Tax=Labrenzia RepID=U7FPJ8_9RHOB
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=1397530 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Lab
50S ribosomal protein L35
scnpilot_expt_750_p_scaffold_1389_7
Rickettsiales bacterium SCGC AAA041-L04, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11925..12650
DNA (726bp) protein (242aa)
Prepilin-type N-terminal cleavage/methylation domain-containing protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DRP6_SINAD
Uncharacterized protein {ECO:0000313|EMBL:KKB96090.1}; TaxID=1607817 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales.;" source="Rickettsiales bacterium SCGC AAA041-L04.;"
prepilin-type N-terminal cleavage/methylation domain-containing protein
scnpilot_expt_750_p_scaffold_1389_8
unknown

Not on your lists

12749..13111
DNA (363bp) protein (121aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_1389_9
unknown

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comp(13115..14281)
DNA (1167bp) protein (389aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_1389_10
unknown

Not on your lists

comp(14453..14899)
DNA (447bp) protein (149aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_1389_11
R_Alphaproteobacteria_40_19, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14877..15371)
DNA (495bp) protein (165aa)
ABC transporter substrate binding protein; K02067 putative ABC transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Alphaproteobacteria_40_19_curated
mlaD; putative phospholipid ABC transporter-binding protein mlaD
Putative ABC transporter involved in resistance to organic solvents, periplasmic component id=2439544 bin=GWA1_Alphaproteobacteria_45_9 species=Azospirillum brasilense genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA1_Alphaproteobacteria_45_9 organism_group=Alphaproteobacteria organism_desc=Good marker genes; small
scnpilot_expt_750_p_scaffold_1389_12
endosymbiont of Acanthamoeba sp. UWC36, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15371..15730)
DNA (360bp) protein (120aa)
NADH dehydrogenase {ECO:0000313|EMBL:KIE04292.1}; EC=1.6.99.3 {ECO:0000313|EMBL:KIE04292.1};; TaxID=86105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Holosporaceae.;" source
NADH dehydrogenase n=1 Tax=Oceanibaculum indicum P24 RepID=K2J291_9PROT
NADH:ubiquinone oxidoreductase subunit
scnpilot_expt_750_p_scaffold_1389_13
uncultured Flavobacteriia bacterium, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15805..16554)
DNA (750bp) protein (250aa)
3'-phosphoadenosine 5'-phosphate phosphatase {ECO:0000313|EMBL:CBL87264.1}; EC=3.1.3.7 {ECO:0000313|EMBL:CBL87264.1};; TaxID=212695 species="Bacteria; Bacteroidetes; Flavobacteriia; environmental samp
cysQ; adenosine-3'(2'),5'-bisphosphate nucleotidase (EC:3.1.3.7)
hypothetical protein n=1 Tax=Ahrensia kielensis RepID=UPI000366DF0D
scnpilot_expt_750_p_scaffold_1389_14
endosymbiont of Acanthamoeba sp. UWC36, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16555..17286
DNA (732bp) protein (244aa)
Type 4 prepilin-like proteins leader peptide-processing enzyme n=1 Tax=Erysipelotrichaceae bacterium 3_1_53 RepID=E2SR74_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KIE05889.1}; TaxID=86105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Holosporaceae.;" source="endosymbiont of Acanthamoeba sp. UWC3
peptidase A24A domain-containing protein
scnpilot_expt_750_p_scaffold_1389_15
Labrenzia alexandrii, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17270..17596)
DNA (327bp) protein (109aa)
hypothetical protein n=1 Tax=alpha proteobacterium SCGC AAA280-B11 RepID=UPI0003697434
Putative uncharacterized protein {ECO:0000313|EMBL:EEE45658.1}; TaxID=244592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia a
hypothetical protein
scnpilot_expt_750_p_scaffold_1389_16
Rickettsiales bacterium SCGC AAA041-L04, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17679..18434
DNA (756bp) protein (252aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=16
purC; Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Bartonella alsatica IBS 382 RepID=J1IW46_9RHIZ
scnpilot_expt_750_p_scaffold_1389_17
SAR116 cluster alpha proteobacterium HIMB100, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(18991..19257)
DNA (267bp) protein (89aa)
30S ribosomal protein S20 n=1 Tax=SAR116 cluster alpha proteobacterium HIMB100 RepID=G6A188_9PROT
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=909943 species="Bacteria; Proteobacteria; Alphaproteobacteria; SAR116 cluster.;" source="SAR116 cluster alpha proteobacterium HIMB100
30S ribosomal protein S20
scnpilot_expt_750_p_scaffold_1389_18
alpha proteobacterium HIMB5, Pelagibacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19328..20845)
DNA (1518bp) protein (506aa)
Integral membrane protein MviN n=1 Tax=alpha proteobacterium HIMB5 RepID=J9YYP4_9PROT
integral membrane protein MviN
Putative lipid II flippase MurJ {ECO:0000256|PIRNR:PIRNR002869}; TaxID=859653 species="Bacteria; Proteobacteria; Alphaproteobacteria; Pelagibacterales; Pelagibacteraceae.;" source="alpha proteobacteri
scnpilot_expt_750_p_scaffold_1389_19
Trichomonas vaginalis, Trichomonas, Trichomonadida, Eukaryota

Not on your lists

21047..22441
DNA (1395bp) protein (465aa)
Viral A-type inclusion protein, putative n=1 Tax=Trichomonas vaginalis RepID=A2FK27_TRIVA
Viral A-type inclusion protein, putative {ECO:0000313|EMBL:EAX94736.1}; TaxID=5722 species="Eukaryota; Parabasalia; Trichomonadida; Trichomonadidae; Trichomonas.;" source="Trichomonas vaginalis.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_1389_20
unknown

Not on your lists

comp(22517..24331)
DNA (1815bp) protein (605aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_1389_21
unknown

Not on your lists

comp(24292..26154)
DNA (1863bp) protein (621aa)

This feature has no annotations

Displaying 21 items

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