ggKbase home page

scnpilot_expt_750_p_scaffold_469

Search features with annotation key words

Displaying items 1-30 of 71 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_p_scaffold_469_1
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3..98
DNA (96bp) protein (32aa)
Uncharacterized protein {ECO:0000313|EMBL:EXJ52836.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
scnpilot_expt_750_p_scaffold_469_2
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

108..1235
DNA (1128bp) protein (376aa)
UPI0003C7E2B1 related cluster n=1 Tax=unknown RepID=UPI0003C7E2B1
Integrase {ECO:0000313|EMBL:EXJ52690.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
putative phage integrase
scnpilot_expt_750_p_scaffold_469_3
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2008..2343)
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI000310FC2E
Uncharacterized protein {ECO:0000313|EMBL:KHK98835.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
scnpilot_expt_750_p_scaffold_469_4
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2464..3189
DNA (726bp) protein (242aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00031C374D
Uncharacterized protein {ECO:0000313|EMBL:CDJ99830.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
scnpilot_expt_750_p_scaffold_469_5
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3190..3789
DNA (600bp) protein (200aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002FCBAE0
Uncharacterized protein {ECO:0000313|EMBL:CDJ99831.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
cell wall binding protein
scnpilot_expt_750_p_scaffold_469_6
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3813..4112
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00030C3E86
Uncharacterized protein {ECO:0000313|EMBL:CDJ99832.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
scnpilot_expt_750_p_scaffold_469_7
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4116..5513
DNA (1398bp) protein (466aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00031FB11D rbh
Uncharacterized protein {ECO:0000313|EMBL:CDJ99833.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
scnpilot_expt_750_p_scaffold_469_8
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5510..7021
DNA (1512bp) protein (504aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00036AABA4 rbh
Uncharacterized protein {ECO:0000313|EMBL:KHK98839.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
integral membrane protein
scnpilot_expt_750_p_scaffold_469_9
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7021..8595
DNA (1575bp) protein (525aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0003779DC7 rbh
Uncharacterized protein {ECO:0000313|EMBL:CDJ99835.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_469_10
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8592..9890
DNA (1299bp) protein (433aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00036F89E4 rbh
Uncharacterized protein {ECO:0000313|EMBL:CDJ99836.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_469_11
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9904..11736
DNA (1833bp) protein (611aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002F00C64 rbh
Type IV secretory pathway, VirD4 component {ECO:0000313|EMBL:CDJ99837.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp
type IV secretory pathway, VirD4 component
scnpilot_expt_750_p_scaffold_469_12
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11733..12131
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RTT2_LEIAQ
Uncharacterized protein {ECO:0000313|EMBL:ERK72191.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
scnpilot_expt_750_p_scaffold_469_13
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12128..12625
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002DD47A7
Uncharacterized protein {ECO:0000313|EMBL:CDJ99839.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_469_14
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12644..13081
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0003154778
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1358026 species="Bacteria; Actinobacteria; Mic
single stranded DNA-binding protein
scnpilot_expt_750_p_scaffold_469_15
Gordonibacter pamelaeae, Gordonibacter, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

13236..14075
DNA (840bp) protein (280aa)
Putative uncharacterized protein n=1 Tax=Gordonibacter pamelaeae 7-10-1-b RepID=D6E773_9ACTN
Protein of unknown function (DUF2005).
Uncharacterized protein {ECO:0000313|EMBL:CBL03570.1}; TaxID=657308 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Gordonibacter.;" source="Gordonibacter pamelaeae
scnpilot_expt_750_p_scaffold_469_16
Gordonibacter pamelaeae, Gordonibacter, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

14072..15037
DNA (966bp) protein (322aa)
Putative uncharacterized protein n=1 Tax=Gordonibacter pamelaeae 7-10-1-b RepID=D6E774_9ACTN rbh
Domain of unknown function (DUF1814). rbh
Uncharacterized protein {ECO:0000313|EMBL:CBL03571.1}; TaxID=657308 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Gordonibacter.;" source="Gordonibacter pamelaeae
scnpilot_expt_750_p_scaffold_469_17
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15104..18145)
DNA (3042bp) protein (1014aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036A8F26 rbh
Uncharacterized protein {ECO:0000313|EMBL:KHK98845.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
TrwC relaxase
scnpilot_expt_750_p_scaffold_469_18
Bifidobacterium subtile, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18393..18725)
DNA (333bp) protein (111aa)
Regulatory protein ArsR n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E9H6_9MICO
Regulatory protein ArsR {ECO:0000313|EMBL:KFI97595.1}; TaxID=77635 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium subtile.;"
ArsR family transcriptional regulator
scnpilot_expt_750_p_scaffold_469_19
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18784..20841
DNA (2058bp) protein (686aa)
Putative cadmium-transporting ATPase {ECO:0000313|EMBL:KJL42776.1}; EC=3.6.3.3 {ECO:0000313|EMBL:KJL42776.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microba
ATPase n=2 Tax=Agrococcus RepID=U1MU90_9MICO
hypothetical protein
scnpilot_expt_750_p_scaffold_469_20
actinobacterium acMicro-4, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21582..22187
DNA (606bp) protein (202aa)
Peptidase M23B n=1 Tax=Leifsonia rubra CMS 76R RepID=S7W310_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KGA05480.1}; TaxID=1504317 species="Bacteria; Actinobacteria.;" source="actinobacterium acMicro-4.;"
M23 family membrane bound metalloendopeptidase
scnpilot_expt_750_p_scaffold_469_21
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22192..23451
DNA (1260bp) protein (420aa)
putative membrane bound metalloprotease id=7720723 bin=CNBR_ACT species=Salinibacterium sp. PAMC 21357 genus=Salinibacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Cell wall binding protein {ECO:0000313|EMBL:EAR25813.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
peptidase
scnpilot_expt_750_p_scaffold_469_22
Brevibacterium casei, Brevibacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23597..23974
DNA (378bp) protein (126aa)
hypothetical protein n=1 Tax=Brevibacterium linens RepID=UPI000050FB11
Uncharacterized protein {ECO:0000313|EMBL:EKU48338.1}; TaxID=1229781 species="Bacteria; Actinobacteria; Micrococcales; Brevibacteriaceae; Brevibacterium.;" source="Brevibacterium casei S18.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_469_23
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24066..25016)
DNA (951bp) protein (317aa)
Membrane protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KET7_9MICO
Cytochrome c oxidase caa3-type, assembly factor CtaG-related protein {ECO:0000313|EMBL:CDK01718.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_469_24
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25013..25609)
DNA (597bp) protein (199aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal pep
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI000307DF0F
lipoprotein signal peptidase
scnpilot_expt_750_p_scaffold_469_25
Roseovarius sp. BRH_c41, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25590..25868)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5K496_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KJS43801.1}; TaxID=1629709 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius sp. B
hypothetical protein
scnpilot_expt_750_p_scaffold_469_26
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25924..26940)
DNA (1017bp) protein (339aa)
Putative oxidoreductase CzcO {ECO:0000313|EMBL:KJL37346.1}; EC=1.-.-.- {ECO:0000313|EMBL:KJL37346.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.
FAD dependent oxidoreductase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E9J4_9MICO
FAD dependent oxidoreductase
scnpilot_expt_750_p_scaffold_469_27
Mycobacterium abscessus, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27714..28616)
DNA (903bp) protein (301aa)
hypothetical protein, partial n=1 Tax=Microbacterium yannicii RepID=UPI00037D7FAE rbh
Inner membrane protein yoaE {ECO:0000313|EMBL:CRG60840.1}; TaxID=36809 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium abscessus.;"
integral membrane protein TerC
scnpilot_expt_750_p_scaffold_469_28
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28896..29210
DNA (315bp) protein (105aa)
hypothetical protein n=1 Tax=Promicromonospora sukumoe RepID=UPI000376413C
HTH-type transcriptional regulator CmtR {ECO:0000313|EMBL:KJL25010.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans
ArsR family transcriptional regulator
scnpilot_expt_750_p_scaffold_469_29
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29363..31192
DNA (1830bp) protein (610aa)
Zinc-transporting ATPase {ECO:0000313|EMBL:KJL37349.1}; EC=3.6.3.- {ECO:0000313|EMBL:KJL37349.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" s
Heavy metal translocating P-type ATPase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AB62_9MICO
ctpG; Cation-transporting ATPase G
scnpilot_expt_750_p_scaffold_469_30
unknown

Not on your lists

31301..31675
DNA (375bp) protein (125aa)

This feature has no annotations

Displaying items 1-30 of 71 in total

View Taxonomy