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scnpilot_expt_750_p_scaffold_477

Search features with annotation key words

Displaying items 1-30 of 121 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_p_scaffold_477_1
Drosophila pseudoobscura, Drosophila, Diptera, Neoptera, Arthropoda, Metazoa

Not on your lists

778..1173
DNA (396bp) protein (132aa)
GA17020 {ECO:0000313|EMBL:EAL32073.2}; EC=3.6.1.3 {ECO:0000313|EMBL:EAL32073.2};; TaxID=46245 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota;
GK25754 n=2 Tax=Drosophila RepID=B4NBY3_DROWI
HrpA-like helicase
scnpilot_expt_750_p_scaffold_477_2
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1379..1975
DNA (597bp) protein (199aa)
recombinase RecR n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035EF6D1
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source=
recR; recombination protein
scnpilot_expt_750_p_scaffold_477_3
Curtobacterium flaccumfaciens, Curtobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2016..2861
DNA (846bp) protein (282aa)
HAD family hydrolase n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B7B0A1
HAD family hydrolase {ECO:0000313|EMBL:EYT62925.1}; TaxID=1292022 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Curtobacterium.;" source="Curtobacterium flaccumfaciens UCD-AKU.;
HAD family hydrolase
scnpilot_expt_750_p_scaffold_477_4
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2935..4212
DNA (1278bp) protein (426aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
lysC; aspartokinase (EC:2.7.2.4)
Aspartokinase id=7720935 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
scnpilot_expt_750_p_scaffold_477_5
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4272..5342
DNA (1071bp) protein (357aa)
aspartate-semialdehyde dehydrogenase (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AKA8_9ACTN
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121, ECO:0000256|RuleBase:RU004501}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:M
scnpilot_expt_750_p_scaffold_477_6
Frigoribacterium sp. MEB024, Frigoribacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5384..6853
DNA (1470bp) protein (490aa)
Probable malate:quinone oxidoreductase {ECO:0000256|HAMAP-Rule:MF_00212}; EC=1.1.5.4 {ECO:0000256|HAMAP-Rule:MF_00212};; MQO {ECO:0000256|HAMAP-Rule:MF_00212}; Malate dehydrogenase [quinone] {ECO:0000
mqoA; malate:quinone oxidoreductase (EC:1.1.5.4)
Probable malate:quinone oxidoreductase n=1 Tax=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) RepID=MQO_CLAM3 rbh
scnpilot_expt_750_p_scaffold_477_7
Pelodictyon phaeoclathratiforme, Pelodictyon, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

6925..7788
DNA (864bp) protein (288aa)
Putative uncharacterized protein n=1 Tax=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) RepID=B4SDU7_PELPB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACF42938.1}; TaxID=324925 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Pelodictyon.;" source="Pelodictyo
scnpilot_expt_750_p_scaffold_477_8
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7956..8243
DNA (288bp) protein (96aa)
Glycopeptide antibiotics resistance protein {ECO:0000313|EMBL:BAJ73910.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium te
scnpilot_expt_750_p_scaffold_477_9
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8263..9747
DNA (1485bp) protein (495aa)
wcmN; undecaprenyl-phosphate glycosyl-1-phosphate transferase (EC:2.4.-.-)
Undecaprenyl-phosphate glycosyl-1-phosphate transferase n=1 Tax=Clavibacter michiganensis subsp. nebraskensis NCPPB 2581 RepID=M5BAL2_9MICO rbh
Polyprenyl glycosylphosphotransferase {ECO:0000313|EMBL:AJW78939.1}; TaxID=33014 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis s
scnpilot_expt_750_p_scaffold_477_10
Mycobacterium rhodesiae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10062..10880)
DNA (819bp) protein (273aa)
Glycosyltransferase n=1 Tax=Mycobacterium rhodesiae (strain NBB3) RepID=G8RX40_MYCRN
glycosyltransferase
Glycosyltransferase {ECO:0000313|EMBL:AEV71897.1}; TaxID=710685 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium rhodesiae (strain NBB3).;
scnpilot_expt_750_p_scaffold_477_11
Tetrasphaera australiensis, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11150..12343)
DNA (1194bp) protein (398aa)
Glycosyltransferase n=1 Tax=Saccharomonospora marina XMU15 RepID=H5X589_9PSEU
Putative Glycosyl transferase group 1 {ECO:0000313|EMBL:CCH75761.1}; TaxID=1193182 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera australien
glycosyl transferase
scnpilot_expt_750_p_scaffold_477_12
unknown

Not on your lists

comp(12291..13661)
DNA (1371bp) protein (457aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_477_13
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13658..14182)
DNA (525bp) protein (175aa)
glycosyl transferase family protein (EC:2.4.1.-)
Glycosyl transferase group 1 n=1 Tax=Methylobacterium extorquens (strain CM4 / NCIMB 13688) RepID=B7KQI7_METC4
Glycosyl transferase group 1 {ECO:0000313|EMBL:EHP94015.1}; TaxID=882800 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methyloba
scnpilot_expt_750_p_scaffold_477_14
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14818..15807)
DNA (990bp) protein (330aa)
Glycosyltransferase n=1 Tax=Variovorax sp. CF313 RepID=J2T468_9BURK
Glycosyltransferase {ECO:0000313|EMBL:EJL72837.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
group 1 glycosyl transferase
scnpilot_expt_750_p_scaffold_477_15
Pelotomaculum thermopropionicum, Pelotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15794..17314)
DNA (1521bp) protein (507aa)
Uncharacterized membrane protein n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D388_PELTS
MviN; hypothetical protein
Putative lipid II flippase MurJ {ECO:0000256|PIRNR:PIRNR002869}; TaxID=370438 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Pelotomaculum.;" source="Pelotomaculum thermopro
scnpilot_expt_750_p_scaffold_477_16
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17301..18254)
DNA (954bp) protein (318aa)
capI; UDP-glucose epimerase (EC:5.1.3.6)
UDP-glucose epimerase {ECO:0000313|EMBL:CCH88116.1}; EC=5.1.3.6 {ECO:0000313|EMBL:CCH88116.1};; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.
UDP-glucose epimerase n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4EXK3_MODMB
scnpilot_expt_750_p_scaffold_477_17
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18390..19898
DNA (1509bp) protein (503aa)
Putative tyrosine-protein kinase n=1 Tax=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) RepID=A5CPE7_CLAM3
Chromosome partitioning protein {ECO:0000313|EMBL:AJW79707.1}; TaxID=33014 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp.
putative tyrosine-protein kinase
scnpilot_expt_750_p_scaffold_477_18
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19953..20585
DNA (633bp) protein (211aa)
protein-tyrosine phosphatase n=1 Tax=Agromyces italicus RepID=UPI0003B68AC0
Uncharacterized protein {ECO:0000313|EMBL:GAD35061.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
protein-tyrosine-phosphatase
scnpilot_expt_750_p_scaffold_477_19
unknown

Not on your lists

20582..21547
DNA (966bp) protein (322aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_477_20
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21544..23430
DNA (1887bp) protein (629aa)
hypothetical protein n=1 Tax=Humibacter albus RepID=UPI0003B30ED5 rbh
Uncharacterized protein {ECO:0000313|EMBL:AJW79705.1}; TaxID=33014 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. insidios
hypothetical protein
scnpilot_expt_750_p_scaffold_477_21
unknown

Not on your lists

23553..24068
DNA (516bp) protein (172aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_477_22
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24162..25118
DNA (957bp) protein (319aa)
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI00036D98DA
Radical SAM domain protein {ECO:0000313|EMBL:ERK73456.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica A
hypothetical protein
scnpilot_expt_750_p_scaffold_477_23
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25130..25777
DNA (648bp) protein (216aa)
Thymidine kinase {ECO:0000256|RuleBase:RU000544}; EC=2.7.1.21 {ECO:0000256|RuleBase:RU000544};; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="
Thymidine kinase n=1 Tax=Leifsonia rubra CMS 76R RepID=S7XEA3_9MICO
thymidine kinase
scnpilot_expt_750_p_scaffold_477_24
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25812..26144
DNA (333bp) protein (111aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00030EB19B
von Willebrand factor A {ECO:0000313|EMBL:KIC59116.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)
scnpilot_expt_750_p_scaffold_477_25
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26216..26434
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Agromyces italicus RepID=UPI0003B6D555
Uncharacterized protein {ECO:0000313|EMBL:KHK96515.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
scnpilot_expt_750_p_scaffold_477_26
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26444..27145
DNA (702bp) protein (234aa)
Uncharacterized protein id=7720626 bin=CNBR_ACT species=Microbacterium testaceum genus=Microbacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Uncharacterized protein {ECO:0000313|EMBL:ERK71708.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_477_27
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27162..27530)
DNA (369bp) protein (123aa)
cobalamin biosynthesis protein CobN n=1 Tax=Microbacterium sp. B19 RepID=UPI00034A7B34
hypothetical protein
ATP-dependent DNA ligase {ECO:0000313|EMBL:KEP74303.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
scnpilot_expt_750_p_scaffold_477_28
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27626..27895
DNA (270bp) protein (90aa)
Plasmid stabilization system protein n=1 Tax=Microbacterium sp. TS-1 RepID=U2XN46_9MICO
Plasmid stabilization system protein {ECO:0000313|EMBL:GAD34332.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1
plasmid stabilization system protein
scnpilot_expt_750_p_scaffold_477_29
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27936..28271)
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0003746C21
Uncharacterized protein {ECO:0000313|EMBL:KDP92370.1}; TaxID=1291006 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter cf. michiganensis LMG 26808
scnpilot_expt_750_p_scaffold_477_30
unknown

Not on your lists

comp(28274..28369)
DNA (96bp) protein (32aa)

This feature has no annotations

Displaying items 1-30 of 121 in total

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