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scnpilot_expt_750_p_scaffold_487

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_p_scaffold_487_1
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(44..1015)
DNA (972bp) protein (324aa)
NAD-dependent dehydrogenase {ECO:0000313|EMBL:EPR76636.1}; EC=1.1.1.18 {ECO:0000313|EMBL:EPR76636.1};; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" s
dehydrogenase id=7721323 bin=CNBR_ACT species=Salinibacterium sp. PAMC 21357 genus=Salinibacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
dehydrogenase
scnpilot_expt_750_p_scaffold_487_2
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1015..2112)
DNA (1098bp) protein (366aa)
UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase {ECO:0000313|EMBL:KJQ53656.1}; EC=2.6.1.87 {ECO:0000313|EMBL:KJQ53656.1};; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales
PLP-dependent enzyme possibly involved in cellwall biogenesis n=1 Tax=Microbacterium sp. TS-1 RepID=U2YYT4_9MICO rbh
PLP-dependent enzyme possibly involved in cell wall biogenesis rbh
scnpilot_expt_750_p_scaffold_487_3
Arthrobacter sp. AK-YN10, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2109..2702)
DNA (594bp) protein (198aa)
N-acetylglucosamine-1-phosphate uridylyltransferase/acetyltransferase id=7721325 bin=CNBR_ACT species=Salinibacterium sp. PAMC 21357 genus=Salinibacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Acetylglucosamine-1-phosphate uridylyltransferase {ECO:0000313|EMBL:ERI38287.2}; TaxID=1349820 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp
acyltransferase
scnpilot_expt_750_p_scaffold_487_4
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2794..3906
DNA (1113bp) protein (371aa)
manA; mannose-6-phosphate isomerase (EC:5.3.1.8)
mannose-6-phosphate isomerase n=1 Tax=Curtobacterium sp. B18 RepID=UPI00034647E0
Mannose-6-phosphate isomerase {ECO:0000313|EMBL:EAR24808.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
scnpilot_expt_750_p_scaffold_487_5
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4055..4375
DNA (321bp) protein (107aa)
transcription factor WhiB n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B36336
Transcriptional regulator WhiB {ECO:0000256|HAMAP-Rule:MF_01479}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
WhiB family transcriptional regulator
scnpilot_expt_750_p_scaffold_487_6
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4441..7245
DNA (2805bp) protein (935aa)
Putative glycosyl transferase {ECO:0000313|EMBL:EPR77598.1}; EC=2.4.1.- {ECO:0000313|EMBL:EPR77598.1};; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;"
Regulatory protein id=7721338 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
glycosyl transferase
scnpilot_expt_750_p_scaffold_487_7
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7242..8831
DNA (1590bp) protein (530aa)
Putative secreted protein id=7721339 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Putative secreted protein {ECO:0000313|EMBL:EPR77599.1}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_487_8
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8851..10182
DNA (1332bp) protein (444aa)
UDP-glucose 6-dehydrogenase YwqF {ECO:0000313|EMBL:KJL29304.1}; EC=1.1.1.22 {ECO:0000313|EMBL:KJL29304.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacter
UDP-glucose 6-dehydrogenase n=1 Tax=Glaciibacter superstes RepID=UPI0003B738FE
UDP-glucose 6-dehydrogenase
scnpilot_expt_750_p_scaffold_487_9
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10196..10567)
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=Leifsonia sp. 109 RepID=UPI000369D405
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGW42226.1}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 4630
scnpilot_expt_750_p_scaffold_487_10
Nocardioides luteus, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10678..10890
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AI25_9ACTN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJQ99928.1}; Flags: Fragment;; TaxID=1844 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides luteus
scnpilot_expt_750_p_scaffold_487_11
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10887..12362
DNA (1476bp) protein (492aa)
Adenosylhomocysteinase {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548};; S-adenosyl-L-homocysteine hydrola
S-adenosyl-L-homocysteine hydrolase n=1 Tax=Agromyces subbeticus RepID=UPI0003B59835
cell division protein MraZ
scnpilot_expt_750_p_scaffold_487_12
Arthrobacter sp. MWB30, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12448..13212)
DNA (765bp) protein (255aa)
MIP family channel protein id=7721348 bin=CNBR_ACT species=Renibacterium salmoninarum genus=Renibacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Uncharacterized protein {ECO:0000313|EMBL:KIA73996.1}; TaxID=1534409 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. MWB30.;"
porin
scnpilot_expt_750_p_scaffold_487_13
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13389..14066
DNA (678bp) protein (226aa)
Two-component system, regulatory protein id=7721354 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Two-component system, regulatory protein {ECO:0000313|EMBL:EAR24790.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
mtrA; response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
scnpilot_expt_750_p_scaffold_487_14
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14077..15714
DNA (1638bp) protein (546aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
two-component system, sensor kinase (EC:2.7.3.-)
histidine kinase n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI0002893FE4
scnpilot_expt_750_p_scaffold_487_15
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15711..17375
DNA (1665bp) protein (555aa)
lipoprotein LpqB id=7721356 bin=CNBR_ACT species=Salinibacterium sp. PAMC 21357 genus=Salinibacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Lipoprotein LpqB {ECO:0000313|EMBL:EPR77612.1}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
lipoprotein LpqB
scnpilot_expt_750_p_scaffold_487_16
Curtobacterium flaccumfaciens, Curtobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17481..18197
DNA (717bp) protein (239aa)
Competence protein F id=7721357 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Uncharacterized protein {ECO:0000313|EMBL:EYT64214.1}; TaxID=1292022 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Curtobacterium.;" source="Curtobacterium flaccumfaciens UCD-AK
hypothetical protein
scnpilot_expt_750_p_scaffold_487_17
Cellulosimicrobium sp. MM, Cellulosimicrobium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18207..19007
DNA (801bp) protein (267aa)
dolichyl-phosphate beta-D-mannosyltransferase (EC:2.4.1.83)
Dolichyl-phosphate beta-D-mannosyltransferase n=1 Tax=Isoptericola variabilis (strain 225) RepID=F6FUW5_ISOV2
Dolichol-phosphate mannosyltransferase {ECO:0000313|EMBL:KFD42692.1}; TaxID=1523621 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Cellulosimicrobium.;" source="Cellulosimicr
scnpilot_expt_750_p_scaffold_487_18
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19117..19800
DNA (684bp) protein (228aa)
RNA polymerase subunit sigma-54 n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI000289E223
Ribosomal subunit interface protein {ECO:0000313|EMBL:EPR77614.1}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
RNA polymerase subunit sigma-54
scnpilot_expt_750_p_scaffold_487_19
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19845..22637
DNA (2793bp) protein (931aa)
Protein translocase subunit SecA id=7721359 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" sourc
secA; preprotein translocase subunit SecA
scnpilot_expt_750_p_scaffold_487_20
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22647..23111)
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI000287EBA0
Uncharacterized protein {ECO:0000313|EMBL:EAR24784.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_487_21
Rathayibacter toxicus, Rathayibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23251..24747
DNA (1497bp) protein (499aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=145458 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Rathayibacter.;" sourc
Two-component system, sensor protein id=7721365 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
ATPase
scnpilot_expt_750_p_scaffold_487_22
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24784..25032)
DNA (249bp) protein (83aa)
Transcriptional regulator WhiB id=7721366 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Transcriptional regulator WhiB {ECO:0000256|HAMAP-Rule:MF_01479}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicu
regulatory protein
scnpilot_expt_750_p_scaffold_487_23
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25202..25630
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI00028928E3
Uncharacterized protein {ECO:0000313|EMBL:EPR77624.1}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_487_24
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25650..26132)
DNA (483bp) protein (161aa)
Peroxiredoxin n=1 Tax=Microbacterium sp. TS-1 RepID=U2XCA7_9MICO
Peroxiredoxin {ECO:0000313|EMBL:GAD35566.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
scnpilot_expt_750_p_scaffold_487_25
Arthrobacter phenanthrenivorans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26364..27905
DNA (1542bp) protein (514aa)
pntA; NAD(P) transhydrogenase subunit alpha (EC:1.6.1.2)
UPI0003C7E011 related cluster n=1 Tax=unknown RepID=UPI0003C7E011
NAD(P) transhydrogenase subunit alpha {ECO:0000313|EMBL:KIC69246.1}; TaxID=361575 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter phenanthrenivor
scnpilot_expt_750_p_scaffold_487_26
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27908..29320
DNA (1413bp) protein (471aa)
NAD(P) transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; EC=1.6.1.2 {ECO:0000256|PIRNR:PIRNR000204};; Nicotinamide nucleotide transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}
NAD(P)(+) transhydrogenase (EC:1.6.1.2)
UPI0003C7E6B1 related cluster n=1 Tax=unknown RepID=UPI0003C7E6B1
scnpilot_expt_750_p_scaffold_487_27
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29334..30041
DNA (708bp) protein (236aa)
protein tyrosine phosphatase n=1 Tax=Glaciibacter superstes RepID=UPI0003B35E80
Protein tyrosine phosphatase {ECO:0000313|EMBL:KDA05937.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_487_28
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30072..30773)
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XJ24_MICPN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAK33350.1}; TaxID=1032480 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (st
scnpilot_expt_750_p_scaffold_487_29
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30826..32928)
DNA (2103bp) protein (701aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035E7F38
Uncharacterized protein {ECO:0000313|EMBL:CDK01114.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_487_30

Not on your lists

comp(32951..33181)
DNA (231bp) protein (77aa)
hypothetical protein n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B47B87
Uncharacterized protein {ECO:0000313|EMBL:KGA20521.1}; TaxID=449393 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="freshwater metagenome.;"
hypothetical protein
Displaying items 1-30 of 54 in total

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