ggKbase home page

scnpilot_expt_750_p_scaffold_593

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_p_scaffold_593_1
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..467)
DNA (465bp) protein (155aa)
K(+)/H(+) antiporter subunit khtT; K07228 TrkA domain protein id=7721866 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Uncharacterized protein {ECO:0000313|EMBL:EAR25466.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
K(+)/H(+) antiporter subunit khtT
scnpilot_expt_750_p_scaffold_593_2
Frankia alni, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

528..1124
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B521BF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ58845.1}; TaxID=326424 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia alni (strain ACN14a).;"
scnpilot_expt_750_p_scaffold_593_3
Aeromicrobium marinum, Aeromicrobium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1206..1889
DNA (684bp) protein (228aa)
hypothetical protein n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B48FC7
Nuclear export factor GLE1 {ECO:0000313|EMBL:EFQ83974.1}; TaxID=585531 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Aeromicrobium.;" source="Aeromicrobium marinum DSM 15272
hypothetical protein
scnpilot_expt_750_p_scaffold_593_4
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1984..3690
DNA (1707bp) protein (569aa)
major facilitator transporter n=1 Tax=Arthrobacter sp. PAO19 RepID=UPI0003B61ADD rbh
transport protein
Putative integral membrane transport protein {ECO:0000313|EMBL:CAQ02976.1}; TaxID=31964 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michigan
scnpilot_expt_750_p_scaffold_593_5
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3656..4141
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Arthrobacter sp. PAO19 RepID=UPI0003B77DA1
MarR family protein {ECO:0000313|EMBL:KJL21084.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_593_6
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4172..5245)
DNA (1074bp) protein (358aa)
ACP synthase n=1 Tax=Microbacteriaceae RepID=UPI00037A9680
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAT89069.1}; TaxID=281090 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. xyli (strain CTCB07)
scnpilot_expt_750_p_scaffold_593_7
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5220..5939)
DNA (720bp) protein (240aa)
Uncharacterized protein {ECO:0000313|EMBL:KJC63425.1}; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;"
hypothetical protein id=7721907 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
hypothetical protein
scnpilot_expt_750_p_scaffold_593_8
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6019..7389
DNA (1371bp) protein (457aa)
trpE2; anthranilate synthase component I (EC:4.1.3.27)
anthranilate synthase n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI0002893AE5
Anthranilate synthase component I {ECO:0000313|EMBL:EAR25440.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
scnpilot_expt_750_p_scaffold_593_9
unknown

Not on your lists

7473..8075
DNA (603bp) protein (201aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_593_10
unknown

Not on your lists

8099..8665
DNA (567bp) protein (189aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_593_11
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


8714..11299
DNA (2586bp) protein (862aa)
leuS; leucyl-tRNA synthetase (EC:6.1.1.4); K01869 leucyl-tRNA synthetase [EC:6.1.1.4] id=7721910 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1348338 species="Bacteria; Actino
leucyl-tRNA synthetase
scnpilot_expt_750_p_scaffold_593_12
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11391..12035
DNA (645bp) protein (215aa)
competence protein ComEA n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B74AC1
Putative comE operon protein 1 {ECO:0000313|EMBL:EPR77005.1}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
DNA uptake protein
scnpilot_expt_750_p_scaffold_593_13
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12049..14415
DNA (2367bp) protein (789aa)
membrane metal-binding protein; K02238 competence protein ComEC id=7721912 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Putative integral membrane protein {ECO:0000313|EMBL:EAR25437.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_593_14
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14426..15445
DNA (1020bp) protein (340aa)
holA; hypothetical protein (EC:2.7.7.7)
HolA protein n=1 Tax=Clavibacter michiganensis subsp. nebraskensis NCPPB 2581 RepID=M5B8T2_9MICO
DNA polymerase III subunit delta {ECO:0000313|EMBL:AJW78892.1}; TaxID=33014 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp.
scnpilot_expt_750_p_scaffold_593_15
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(15603..15863)
DNA (261bp) protein (87aa)
30S ribosomal protein S20 n=1 Tax=Leifsonia xyli subsp. cynodontis DSM 46306 RepID=U3P5B2_LEIXC
30S ribosomal protein S20
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DS
scnpilot_expt_750_p_scaffold_593_16
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15969..16742)
DNA (774bp) protein (258aa)
alpha/beta hydrolase n=1 Tax=Glaciibacter superstes RepID=UPI0003B3C19F
hydrolase or acyltransferase (alpha/beta hydrolase superfamily)-like protein
Hydrolase or acyltransferase (Alpha/beta hydrolase superfamily)-like protein {ECO:0000313|EMBL:AEI11365.1}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomon
scnpilot_expt_750_p_scaffold_593_17
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17041..17877
DNA (837bp) protein (279aa)
Lactate/malate dehydrogenase n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A708_CELGA rbh
Lactate/malate dehydrogenase
Lactate/malate dehydrogenase {ECO:0000313|EMBL:AEI12362.1}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 131
scnpilot_expt_750_p_scaffold_593_18
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17924..19777
DNA (1854bp) protein (618aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP
elongation factor 4 n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI000371D42F
lepA; GTP-binding protein LepA
scnpilot_expt_750_p_scaffold_593_19
Rhodococcus rhodnii, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19820..20695
DNA (876bp) protein (292aa)
2,5-diketo-D-gluconate reductase n=1 Tax=Rhodococcus rhodnii LMG 5362 RepID=R7WH89_9NOCA rbh
2,5-diketo-D-gluconate reductase {ECO:0000313|EMBL:EOM74520.1}; TaxID=1273125 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus rhodnii LMG 5362.;"
aldo/keto reductase
scnpilot_expt_750_p_scaffold_593_20
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20699..21706)
DNA (1008bp) protein (336aa)
hypothetical protein n=1 Tax=Agromyces italicus RepID=UPI0003B7AB9D
Uncharacterized protein {ECO:0000313|EMBL:KJL31316.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_593_21
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21722..22072)
DNA (351bp) protein (117aa)
Transcriptional regulator, PadR-like family n=1 Tax=Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07) RepID=D1BU81_XYLCX
Lineage-specific thermal regulator protein {ECO:0000313|EMBL:KJL31317.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium aza
PadR-like family transcriptional regulator
scnpilot_expt_750_p_scaffold_593_22
Arthrobacter sp. PAMC25486, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22124..23929
DNA (1806bp) protein (602aa)
acyl-CoA dehydrogenase n=1 Tax=Agromyces italicus RepID=UPI0003B6B907 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIX99675.1}; TaxID=1494608 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. PAMC25486.;"
scnpilot_expt_750_p_scaffold_593_23
Leucobacter sp. UCD-THU, Leucobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24001..25224
DNA (1224bp) protein (408aa)
coproporphyrinogen III oxidase n=1 Tax=Leifsonia sp. 109 RepID=UPI0003655C31
Coproporphyrinogen III oxidase {ECO:0000313|EMBL:EYT52688.1}; TaxID=1292023 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter sp. UCD-THU.;"
coproporphyrinogen III oxidase
scnpilot_expt_750_p_scaffold_593_24
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25288..25791)
DNA (504bp) protein (168aa)
hypothetical protein n=1 Tax=Agromyces italicus RepID=UPI0003B66F60
Uncharacterized protein {ECO:0000313|EMBL:KJC63441.1}; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_593_25
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25931..26953
DNA (1023bp) protein (341aa)
hrcA; heat-inducible transcription repressor; K03705 heat-inducible transcriptional repressor id=7721928 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081, ECO:0000256|SAAS:SAAS00101987}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.
hrcA; heat-inducible transcription repressor
scnpilot_expt_750_p_scaffold_593_26
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26953..28074
DNA (1122bp) protein (374aa)
molecular chaperone DnaJ n=1 Tax=Agromyces italicus RepID=UPI0003B3E945
DnaJ protein
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifson
scnpilot_expt_750_p_scaffold_593_27
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28086..28925
DNA (840bp) protein (280aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=443906 species="Bacteria; Actinobacteria; Micrococcales; Microbact
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) RepID=A5CRA8_CLAM3
16S ribosomal RNA methyltransferase RsmE
scnpilot_expt_750_p_scaffold_593_28
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28950..29300
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Leifsonia xyli subsp. xyli (strain CTCB07) RepID=Q6AEC2_LEIXX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAT89274.1}; TaxID=281090 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. xyli (strain CTCB07)
scnpilot_expt_750_p_scaffold_593_29
Frigoribacterium sp. MEB024, Frigoribacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29287..30327
DNA (1041bp) protein (347aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A3H9_9MICO
Contig_1, whole genome shotgun sequence {ECO:0000313|EMBL:KIU04200.1}; TaxID=1589899 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Frigoribacterium.;" source="Frigoribacterium s
phoH; phosphate starvation-inducible protein PhoH, ATPase
scnpilot_expt_750_p_scaffold_593_30
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30327..30788
DNA (462bp) protein (154aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=1097677 species="Bacteria; A
metalloprotease; K07042 probable rRNA maturation factor id=7721933 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
hypothetical protein
Displaying items 1-30 of 56 in total

View Taxonomy