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scnpilot_expt_750_p_scaffold_738

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Displaying items 1-30 of 124 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_p_scaffold_738_1
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..142
DNA (141bp) protein (47aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037F931A
Major Facilitator Superfamily protein {ECO:0000313|EMBL:KJL34232.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirac
scnpilot_expt_750_p_scaffold_738_2
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

139..900
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KFU3_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EQM75420.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
PA-phosphatase-like phosphodiesterase
scnpilot_expt_750_p_scaffold_738_3
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

905..1507
DNA (603bp) protein (201aa)
transcriptional regulator n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI00037BB232
Transcriptional regulator {ECO:0000313|EMBL:KEP75679.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
response regulator with antiterminator output domain
scnpilot_expt_750_p_scaffold_738_4
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1553..1984)
DNA (432bp) protein (144aa)
ComA operon protein 2 n=1 Tax=Leifsonia rubra CMS 76R RepID=S7W1X8_9MICO
ComA operon protein 2 {ECO:0000313|EMBL:EPR75682.1}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_738_5
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2067..4754
DNA (2688bp) protein (896aa)
DNA polymerase {ECO:0000256|RuleBase:RU004460}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU004460};; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Lei
polA1; DNA polymerase I (EC:2.7.7.7)
DNA polymerase I n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B47100
scnpilot_expt_750_p_scaffold_738_6
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4754..6424
DNA (1671bp) protein (557aa)
hypothetical protein n=1 Tax=Microbacterium sp. 11MF RepID=UPI00035DF721
Uncharacterized protein {ECO:0000313|EMBL:EZP29780.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_738_7
unknown

Not on your lists

6459..6974
DNA (516bp) protein (172aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_738_8
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


7121..8560
DNA (1440bp) protein (480aa)
30S ribosomal protein S1 n=1 Tax=Agromyces italicus RepID=UPI0003B71C4C
rpsA; 30S ribosomal protein S1
30S ribosomal protein S1 {ECO:0000313|EMBL:ERK72914.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
scnpilot_expt_750_p_scaffold_738_9
Leucobacter sp. UCD-THU, Leucobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8514..9230
DNA (717bp) protein (239aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=1292023 species="Bacteria; A
dephospho-CoA kinase n=1 Tax=Humibacter albus RepID=UPI0003B52470
dephospho-CoA kinase
scnpilot_expt_750_p_scaffold_738_10
Arthrobacter globiformis, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9247..10182)
DNA (936bp) protein (312aa)
Putative threonine/homoserine efflux protein n=1 Tax=Arthrobacter globiformis NBRC 12137 RepID=H0QNR1_ARTGO
Putative threonine/homoserine efflux protein {ECO:0000313|EMBL:GAB14462.1}; TaxID=1077972 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter globifo
hypothetical protein
scnpilot_expt_750_p_scaffold_738_11
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10251..12332
DNA (2082bp) protein (694aa)
UvrABC system protein B n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AJQ7_9ACTN
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_0
uvrB; helicase subunit of the DNA excision repair complex
scnpilot_expt_750_p_scaffold_738_12
Mycobacterium sp. KMS, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12355..13173
DNA (819bp) protein (273aa)
short-chain dehydrogenase n=1 Tax=Mycobacterium intracellulare RepID=UPI0001B461BC rbh
short chain dehydrogenase
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABL89992.1}; TaxID=189918 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium sp. (
scnpilot_expt_750_p_scaffold_738_13
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13213..16149
DNA (2937bp) protein (979aa)
uvrA; excinuclease ABC subunit A; K03701 excinuclease ABC subunit A id=7722182 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_0
uvrA; UvrABC system protein A
scnpilot_expt_750_p_scaffold_738_14
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16151..18031
DNA (1881bp) protein (627aa)
uvrC; excinuclease ABC subunit C; K03703 excinuclease ABC subunit C id=7722183 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_0
excinuclease ABC subunit C
scnpilot_expt_750_p_scaffold_738_15
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18028..18906
DNA (879bp) protein (293aa)
UPF0042 nucleotide-binding protein CMN_01727 n=1 Tax=Clavibacter michiganensis subsp. nebraskensis NCPPB 2581 RepID=M5BDF1_9MICO
Nucleotide-binding protein VO01_07970 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=33014 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganens
nucleotide-binding protein
scnpilot_expt_750_p_scaffold_738_16
Rathayibacter toxicus, Rathayibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18908..20464
DNA (1557bp) protein (519aa)
sporulation protein n=1 Tax=Curtobacterium sp. B18 RepID=UPI000347F772
sporulation protein
Putative sporulation transcription regulator WhiA {ECO:0000256|HAMAP-Rule:MF_01420, ECO:0000256|SAAS:SAAS00005305}; TaxID=145458 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Ra
scnpilot_expt_750_p_scaffold_738_17
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20498..21508
DNA (1011bp) protein (337aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae
gapA; glyceraldehyde 3-phosphate dehydrogenase (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase, type I n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TE52_LEIAQ
scnpilot_expt_750_p_scaffold_738_18
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21513..22727
DNA (1215bp) protein (405aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=582680 species="Bacteria;
pgk; phosphoglycerate kinase (EC:2.7.2.3)
phosphoglycerate kinase n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B5F582
scnpilot_expt_750_p_scaffold_738_19
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22737..23543
DNA (807bp) protein (269aa)
tpiA; triosephosphate isomerase; K01803 triosephosphate isomerase (TIM) [EC:5.3.1.1] id=7722189 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleB
tpiA; hypothetical protein (EC:5.3.1.1)
scnpilot_expt_750_p_scaffold_738_20
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23622..23876
DNA (255bp) protein (85aa)
preprotein translocase subunit SecG n=1 Tax=Agromyces italicus RepID=UPI0003B5EB0B
Preprotein translocase, SecG subunit {ECO:0000313|EMBL:ERK72944.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 1466
preprotein translocase subunit SecG
scnpilot_expt_750_p_scaffold_738_21
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23905..24261
DNA (357bp) protein (119aa)
RNA polymerase-binding protein RbpA n=1 Tax=Leifsonia xyli subsp. cynodontis DSM 46306 RepID=U3P4V1_LEIXC
electron transport protein
RNA polymerase-binding protein RbpA {ECO:0000256|HAMAP-Rule:MF_01483}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cyn
scnpilot_expt_750_p_scaffold_738_22
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24271..25062)
DNA (792bp) protein (264aa)
pgl; 6-phosphogluconolactonase (EC:3.1.1.31); K01057 6-phosphogluconolactonase [EC:3.1.1.31] id=7722192 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
pglA; 6-phosphogluconolactonase (EC:3.1.1.31)
6-phosphogluconolactonase {ECO:0000313|EMBL:EAR24371.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
scnpilot_expt_750_p_scaffold_738_23
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25059..26000)
DNA (942bp) protein (314aa)
oxidoreductase n=1 Tax=Agromyces subbeticus RepID=UPI0003B63BC4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAQ02079.1}; TaxID=31964 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. sepedoni
scnpilot_expt_750_p_scaffold_738_24
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26000..27541)
DNA (1542bp) protein (514aa)
zwfA2; glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49); K00036 glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49] id=7722194 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Glucose-6-phosphate 1-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497}; Short=G6PD {ECO:0000256|HAMAP-Rule:MF_00966};; EC=1.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0
zwfA2; glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49)
scnpilot_expt_750_p_scaffold_738_25
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27538..29082)
DNA (1545bp) protein (515aa)
Glucose-6-phosphate isomerase {ECO:0000256|RuleBase:RU000612, ECO:0000256|SAAS:SAAS00115780}; EC=5.3.1.9 {ECO:0000256|RuleBase:RU000612, ECO:0000256|SAAS:SAAS00115780};; TaxID=1348338 species="Bacteri
Glucose-6-phosphate isomerase n=1 Tax=Leifsonia rubra CMS 76R RepID=S7VZ77_9MICO
pgiA; hypothetical protein
scnpilot_expt_750_p_scaffold_738_26
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29079..30203)
DNA (1125bp) protein (375aa)
tal2; transaldolase (EC:2.2.1.2); K00616 transaldolase [EC:2.2.1.2] id=7722196 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Transaldolase {ECO:0000256|HAMAP-Rule:MF_00493, ECO:0000256|SAAS:SAAS00118670}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00493, ECO:0000256|SAAS:SAAS00118670};; TaxID=312284 species="Bacteria; Actinobact
tal2; transaldolase
scnpilot_expt_750_p_scaffold_738_27
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30200..32266)
DNA (2067bp) protein (689aa)
Transketolase {ECO:0000313|EMBL:KJL27711.1}; EC=2.2.1.1 {ECO:0000313|EMBL:KJL27711.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Micro
transketolase n=1 Tax=Agromyces subbeticus RepID=UPI0003B4C01C
tktA1; transketolase
scnpilot_expt_750_p_scaffold_738_28
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32329..33267
DNA (939bp) protein (313aa)
ctaB; protoheme IX farnesyltransferase; K02301 protoheme IX farnesyltransferase [EC:2.5.1.-] id=7722198 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Protoheme IX farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_00154};; Heme B farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; Heme O synthase {ECO:00
ctaB; protoheme IX farnesyltransferase (EC:2.5.1.-)
scnpilot_expt_750_p_scaffold_738_29
Leucobacter sp. UCD-THU, Leucobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33275..34162)
DNA (888bp) protein (296aa)
hypothetical protein n=1 Tax=Leucobacter sp. UCD-THU RepID=UPI00036BB23A
Cytochrome oxidase assembly protein {ECO:0000313|EMBL:EYT53727.1}; TaxID=1292023 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter sp. UCD-THU.;"
cytochrome oxidase assembly protein
scnpilot_expt_750_p_scaffold_738_30
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34226..35665
DNA (1440bp) protein (480aa)
Fe-S cluster assembly protein SufB n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036344F9
FeS cluster assembly protein SufB {ECO:0000313|EMBL:KJL43256.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli
sufB; ABC transporter
Displaying items 1-30 of 124 in total

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