ggKbase home page

scnpilot_expt_750_p_scaffold_802

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_p_scaffold_802_1
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..751)
DNA (750bp) protein (250aa)
Purine nucleoside phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; EC=2.4.2.1 {ECO:0000256|PIRNR:PIRNR000477};; Inosine-guanosine phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; TaxID=1177594 species="Ba
punA; purine nucleoside phosphorylase (EC:2.4.2.1)
purine nucleoside phosphorylase n=1 Tax=Microbacteriaceae RepID=UPI00036EF88A
scnpilot_expt_750_p_scaffold_802_2
Kineococcus radiotolerans, Kineococcus, Kineosporiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

943..2163
DNA (1221bp) protein (407aa)
Methionine synthase vitamin-B12 independent n=1 Tax=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) RepID=A6WDP9_KINRD rbh
vitamin-B12 independent methionine synthase rbh
Methionine synthase vitamin-B12 independent {ECO:0000313|EMBL:ABS04938.1}; TaxID=266940 species="Bacteria; Actinobacteria; Kineosporiales; Kineosporiaceae; Kineococcus.;" source="Kineococcus radiotole
scnpilot_expt_750_p_scaffold_802_3
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2234..3679
DNA (1446bp) protein (482aa)
lpdA; flavoprotein disulfide reductase (EC:1.8.1.4)
Dihydrolipoamide dehydrogenase id=7721282 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:KDP91636.1}; TaxID=1291006 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter cf. mi
scnpilot_expt_750_p_scaffold_802_4
Rhodococcus triatomae, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3686..4573)
DNA (888bp) protein (296aa)
Abortive infection protein n=1 Tax=Rhodococcus triatomae BKS 15-14 RepID=M2WDJ6_9NOCA
Abortive infection protein {ECO:0000313|EMBL:EME21785.1}; TaxID=1278078 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus triatomae BKS 15-14.;"
abortive infection protein
scnpilot_expt_750_p_scaffold_802_5
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4607..6355)
DNA (1749bp) protein (583aa)
Biotin carboxylase n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AI83_9ACTN
Biotin carboxylase {ECO:0000313|EMBL:EAR24858.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
biotin carboxylase
scnpilot_expt_750_p_scaffold_802_6
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6491..7114)
DNA (624bp) protein (208aa)
Maf-like protein O159_04820 n=1 Tax=Leifsonia xyli subsp. cynodontis DSM 46306 RepID=U3PAY9_LEIXC
hypothetical protein
Maf-like protein O159_04820 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis
scnpilot_expt_750_p_scaffold_802_7
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7137..8465
DNA (1329bp) protein (443aa)
Deoxyribonuclease/rho motif-related TRAM n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E1G3_9MICO
Deoxyribonuclease/rho motif-related TRAM {ECO:0000313|EMBL:EIC08983.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laev
protoporphyrinogen oxidase
scnpilot_expt_750_p_scaffold_802_8
unknown

Not on your lists

comp(8727..8984)
DNA (258bp) protein (86aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_802_9
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8981..10594)
DNA (1614bp) protein (538aa)
Propionyl-CoA carboxylase beta n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AI76_9ACTN
Propionyl-CoA carboxylase beta {ECO:0000313|EMBL:EAR24851.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
pccB; propionyl-CoA carboxylase subunit beta
scnpilot_expt_750_p_scaffold_802_10
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10628..11416
DNA (789bp) protein (263aa)
Biotin acetyl-CoA-carboxylase synthetase n=1 Tax=Leifsonia xyli subsp. xyli (strain CTCB07) RepID=Q6AGM8_LEIXX
Contig_38, whole genome shotgun sequence {ECO:0000313|EMBL:KIP88406.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp.
birA; biotin acetyl-CoA-carboxylase synthetase
scnpilot_expt_750_p_scaffold_802_11
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11420..11929
DNA (510bp) protein (170aa)
hypothetical protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B3FB51
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGW40690.1}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 4630
scnpilot_expt_750_p_scaffold_802_12
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11892..12407)
DNA (516bp) protein (172aa)
hypothetical protein SPAM21_04628 id=7721296 bin=CNBR_ACT species=Salinibacterium sp. PAMC 21357 genus=Salinibacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
hypothetical protein
Membrane protein {ECO:0000313|EMBL:KDP91648.1}; TaxID=1291006 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter cf. michiganensis LMG 26808.;"
scnpilot_expt_750_p_scaffold_802_13
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12510..13622
DNA (1113bp) protein (371aa)
phosphoribosylaminoimidazole carboxylase n=1 Tax=Microbacterium barkeri RepID=UPI0002E64099
N5-carboxyaminoimidazole ribonucleotide synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; Short=N5-CAIR synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU36120
purK; phosphoribosylaminoimidazole carboxylase
scnpilot_expt_750_p_scaffold_802_14
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13688..14209
DNA (522bp) protein (174aa)
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Humibacter albus RepID=UPI0003B75048
purE; phosphoribosylaminoimidazole carboxylase, catalytic subunit protein
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};;
scnpilot_expt_750_p_scaffold_802_15
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14206..15597
DNA (1392bp) protein (464aa)
transcriptional regulator n=1 Tax=Humibacter albus RepID=UPI0003B61591
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGW40694.1}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 4630
scnpilot_expt_750_p_scaffold_802_16
Frigoribacterium sp. MEB024, Frigoribacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15665..16801)
DNA (1137bp) protein (379aa)
hypothetical protein n=1 Tax=Curtobacterium flaccumfaciens RepID=UPI000382315F rbh
Contig_23, whole genome shotgun sequence {ECO:0000313|EMBL:KIU03485.1}; TaxID=1589899 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Frigoribacterium.;" source="Frigoribacterium
mannosyltransferase
scnpilot_expt_750_p_scaffold_802_17
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16798..17712)
DNA (915bp) protein (305aa)
Alpha-L-Rha alpha-1,3-L-rhamnosyltransferase {ECO:0000313|EMBL:EPR76611.1}; EC=2.4.1.- {ECO:0000313|EMBL:EPR76611.1};; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae
family 2 glycosyl transferase id=7721303 bin=CNBR_ACT species=Salinibacterium sp. PAMC 21357 genus=Salinibacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
family 2 glycosyl transferase
scnpilot_expt_750_p_scaffold_802_18
Actinopolyspora erythraea, Actinopolyspora, Actinopolysporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17709..18845)
DNA (1137bp) protein (379aa)
glycosyl transferase n=1 Tax=Actinopolyspora mortivallis RepID=UPI0003673F82 rbh
Glycosyl transferase family 1 {ECO:0000313|EMBL:KGI80529.1}; TaxID=414996 species="Bacteria; Actinobacteria; Actinopolysporales; Actinopolysporaceae; Actinopolyspora.;" source="Actinopolyspora erythra
group 1 glycosyl transferase
scnpilot_expt_750_p_scaffold_802_19
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18908..19531
DNA (624bp) protein (208aa)
hypothetical protein n=1 Tax=Microbacteriaceae RepID=UPI000375211B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB45069.1}; TaxID=263358 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-
scnpilot_expt_750_p_scaffold_802_20
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19659..25688
DNA (6030bp) protein (2010aa)
hypothetical protein id=7721623 bin=CNBR_ACT species=Clavibacter michiganensis genus=Clavibacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCE75134.1}; TaxID=1097677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. nebras
scnpilot_expt_750_p_scaffold_802_21
Cryobacterium roopkundense, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25636..27402
DNA (1767bp) protein (589aa)
hypothetical protein n=1 Tax=Agromyces subbeticus RepID=UPI0003B4EF1C rbh
Uncharacterized protein {ECO:0000313|EMBL:KGJ71670.1}; TaxID=1001240 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium roopkundense.;"
YD repeat protein
scnpilot_expt_750_p_scaffold_802_22
unknown

Not on your lists

comp(28175..28426)
DNA (252bp) protein (84aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_802_23
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28591..29490)
DNA (900bp) protein (300aa)
rmlD; putative dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI000364BA0A
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:EAR24836.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
scnpilot_expt_750_p_scaffold_802_24
Aeromicrobium marinum, Aeromicrobium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29493..30488)
DNA (996bp) protein (332aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=585531 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Aeromi
dTDP-glucose 4,6-dehydratase n=1 Tax=Aeromicrobium marinum DSM 15272 RepID=E2S8S7_9ACTO
rfbB; dTDP-D-glucose 4,6-dehydratase
scnpilot_expt_750_p_scaffold_802_25
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30557..32089
DNA (1533bp) protein (511aa)
hypothetical protein n=1 Tax=Agromyces italicus RepID=UPI0003B568BA
Uncharacterized protein {ECO:0000313|EMBL:KJL29286.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
scnpilot_expt_750_p_scaffold_802_26
Mycobacterium kansasii, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32086..32610
DNA (525bp) protein (175aa)
polysaccharide biosynthesis protein GtrA n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B332D6
polysaccharide biosynthesis protein GtrA
GtrA-like family protein {ECO:0000313|EMBL:ETZ98052.1}; TaxID=1299328 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium kansasii 824.;"
scnpilot_expt_750_p_scaffold_802_27
Rhodococcus ruber, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32607..33458
DNA (852bp) protein (284aa)
Putative glycosyltransferase {ECO:0000313|EMBL:CDZ87450.1}; EC=2.4.-.- {ECO:0000313|EMBL:CDZ87450.1};; TaxID=1830 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" sou
putative glycosyltransferase (EC:2.4.-.-)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00036F6DA1 rbh
scnpilot_expt_750_p_scaffold_802_28
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33458..35233
DNA (1776bp) protein (592aa)
hypothetical protein n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B45013 rbh
Carbohydrate translocase {ECO:0000313|EMBL:EON25806.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_802_29
Streptomyces toyocaensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35247..36230)
DNA (984bp) protein (328aa)
UDP-glucose 4-epimerase n=1 Tax=Streptomyces sp. LaPpAH-108 RepID=UPI0003619C2D rbh
UDP-glucose 4-epimerase {ECO:0000313|EMBL:KES05662.1}; TaxID=55952 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces toyocaensis.;"
UDP-glucose 4-epimerase
scnpilot_expt_750_p_scaffold_802_30
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(36227..36580)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R7J5_LEIAQ
Uncharacterized protein {ECO:0000313|EMBL:ERK71220.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
Displaying items 1-30 of 57 in total

View Taxonomy