ggKbase home page

scnpilot_expt_750_p_scaffold_827

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_p_scaffold_827_1
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..928
DNA (927bp) protein (309aa)
hypothetical protein n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B5305B
Uncharacterized protein {ECO:0000313|EMBL:EAR23829.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_827_2
unknown

Not on your lists

1014..1355
DNA (342bp) protein (114aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_827_3
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1810..3483)
DNA (1674bp) protein (558aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=281090 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifs
ATP-dependent DNA helicase II n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B32CEC
ATP-dependent DNA helicase II
scnpilot_expt_750_p_scaffold_827_4
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3490..4416)
DNA (927bp) protein (309aa)
hydrolase; K03426 NAD+ diphosphatase [EC:3.6.1.22] id=7719523 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
NADH pyrophosphatase {ECO:0000313|EMBL:EPR75758.1}; EC=3.6.1.22 {ECO:0000313|EMBL:EPR75758.1};; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="
putative NTP pyrophosphohydrolase
scnpilot_expt_750_p_scaffold_827_5
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4484..5473
DNA (990bp) protein (330aa)
putative phosphotransferase id=7719524 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Macrolide 2'-phosphotransferase {ECO:0000313|EMBL:EAR23825.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
phosphotransferase
scnpilot_expt_750_p_scaffold_827_6
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5532..8804)
DNA (3273bp) protein (1091aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=443906 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Cla
Putative ATP-dependent DNA helicase n=1 Tax=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) RepID=A5CQ88_CLAM3
uvrD2; putative ATP-dependent DNA helicase
scnpilot_expt_750_p_scaffold_827_7
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8801..11896)
DNA (3096bp) protein (1032aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
ATP-dependent DNA helicase n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI000288722A
ATP-dependent DNA helicase
scnpilot_expt_750_p_scaffold_827_8
Frigoribacterium sp. MEB024, Frigoribacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12000..12224
DNA (225bp) protein (75aa)
ATP-binding protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B4688B
Contig_39, whole genome shotgun sequence {ECO:0000313|EMBL:KIU02835.1}; TaxID=1589899 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Frigoribacterium.;" source="Frigoribacterium
hypothetical protein
scnpilot_expt_750_p_scaffold_827_9
Cryobacterium roopkundense, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12237..12530
DNA (294bp) protein (98aa)
hypothetical protein n=1 Tax=Agromyces italicus RepID=UPI0003B545F7
Uncharacterized protein {ECO:0000313|EMBL:KGJ81135.1}; TaxID=1001240 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium roopkundense.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_827_10
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12544..13260)
DNA (717bp) protein (239aa)
hypothetical protein id=7719531 bin=CNBR_ACT species=Salinibacterium sp. PAMC 21357 genus=Salinibacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Uncharacterized protein {ECO:0000313|EMBL:EPR75750.1}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_827_11
Curtobacterium flaccumfaciens, Curtobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13441..14943
DNA (1503bp) protein (501aa)
hypothetical protein n=1 Tax=Curtobacterium flaccumfaciens RepID=UPI00035CA4FB
RNA helicase {ECO:0000313|EMBL:EYT57354.1}; TaxID=1292022 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Curtobacterium.;" source="Curtobacterium flaccumfaciens UCD-AKU.;"
ATP-dependent RNA helicase
scnpilot_expt_750_p_scaffold_827_12
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14991..15839)
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM 20744 / JCM 9667 / LMG 2889 / C-1) RepID=B0RE41_CLAMS
Metal-dependent phosphoesterase {ECO:0000313|EMBL:AJW78548.1}; TaxID=33014 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp.
hypothetical protein
scnpilot_expt_750_p_scaffold_827_13
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15873..16895
DNA (1023bp) protein (341aa)
putative membrane protein with hydrolase activity id=7719534 bin=CNBR_ACT species=Salinibacterium sp. PAMC 21357 genus=Salinibacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Uncharacterized protein {ECO:0000313|EMBL:EAR23810.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
conserved membrane protein with hydrolase activity
scnpilot_expt_750_p_scaffold_827_14
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16902..18767
DNA (1866bp) protein (622aa)
hypothetical protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B2F056
Carbohydrate translocase {ECO:0000313|EMBL:EON25806.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_827_15
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18755..20284
DNA (1530bp) protein (510aa)
pepP; aminopeptidase; K01262 Xaa-Pro aminopeptidase [EC:3.4.11.9] id=7719535 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Aminopeptidase P {ECO:0000313|EMBL:EAR23809.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
aminopeptidase
scnpilot_expt_750_p_scaffold_827_16
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20286..20873)
DNA (588bp) protein (196aa)
Regulatory protein TetR n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H798_CELFA
regulatory protein TetR
Regulatory protein TetR {ECO:0000313|EMBL:AEE46859.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DS
scnpilot_expt_750_p_scaffold_827_17
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20948..22015
DNA (1068bp) protein (356aa)
Putative uncharacterized protein n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H797_CELFA
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEE46858.1}; Flags: Precursor;; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomona
scnpilot_expt_750_p_scaffold_827_18
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22012..22488)
DNA (477bp) protein (159aa)
hypothetical protein id=7719538 bin=CNBR_ACT species=Leifsonia xyli genus=Leifsonia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAT88803.1}; TaxID=281090 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. xyli (strain CTCB07)
scnpilot_expt_750_p_scaffold_827_19
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22539..23837
DNA (1299bp) protein (433aa)
Mg/Co/Ni transporter MgtE n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NC26_MICTS
Mg/Co/Ni transporter MgtE
Mg/Co/Ni transporter MgtE {ECO:0000313|EMBL:BAJ76069.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain St
scnpilot_expt_750_p_scaffold_827_20
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23824..24339
DNA (516bp) protein (172aa)
hypothetical protein id=7719540 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Membrane protein {ECO:0000313|EMBL:KJC65638.1}; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_827_21
Agrococcus pavilionensis, Agrococcus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24332..25477
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=Agrococcus pavilionensis RW1 RepID=U1LBW3_9MICO
Uncharacterized protein {ECO:0000313|EMBL:ERG64628.1}; TaxID=1330458 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agrococcus.;" source="Agrococcus pavilionensis RW1.;"
chromosome partitioning protein
scnpilot_expt_750_p_scaffold_827_22
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25520..25894)
DNA (375bp) protein (125aa)
Twin-arginine translocation protein TatB n=1 Tax=Leifsonia rubra CMS 76R RepID=S7W220_9MICO
Twin-arginine translocation protein TatB {ECO:0000313|EMBL:EPR75727.1}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.
NADH-dependent dehydrogenase
scnpilot_expt_750_p_scaffold_827_23
Frigoribacterium sp. MEB024, Frigoribacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25954..26586
DNA (633bp) protein (211aa)
O-methyltransferase n=1 Tax=Leifsonia xyli subsp. cynodontis DSM 46306 RepID=U3P7U8_LEIXC
Contig_39, whole genome shotgun sequence {ECO:0000313|EMBL:KIU02837.1}; TaxID=1589899 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Frigoribacterium.;" source="Frigoribacterium
O-methyltransferase
scnpilot_expt_750_p_scaffold_827_24
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26635..26805)
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RCS7_LEIAQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDJ99458.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
scnpilot_expt_750_p_scaffold_827_25
Frigoribacterium sp. MEB024, Frigoribacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26884..28074)
DNA (1191bp) protein (397aa)
hypothetical protein n=1 Tax=Leifsonia sp. 109 RepID=UPI00037FD47A
Contig_39, whole genome shotgun sequence {ECO:0000313|EMBL:KIU02838.1}; TaxID=1589899 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Frigoribacterium.;" source="Frigoribacterium
hypothetical protein
scnpilot_expt_750_p_scaffold_827_26
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28059..29132)
DNA (1074bp) protein (358aa)
dapE; succinyl-diaminopimelate desuccinylase (EC:3.5.1.18); K01439 succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] id=7719553 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
dapE; succinyl-diaminopimelate desuccinylase (EC:3.5.1.18)
Succinyl-diaminopimelate desuccinylase {ECO:0000313|EMBL:CAQ02017.1}; EC=3.5.1.18 {ECO:0000313|EMBL:CAQ02017.1};; TaxID=31964 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavi
scnpilot_expt_750_p_scaffold_827_27
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29244..30185
DNA (942bp) protein (314aa)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_02122}; EC=2.3.1.117 {ECO:0000256|HAMAP-Rule:MF_02122};; Tetrahydrodipicolinate N-succinyltransferase {ECO
dapD; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase (EC:2.3.1.117)
2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase n=1 Tax=Leifsonia sp. 109 RepID=UPI00037D21BF
scnpilot_expt_750_p_scaffold_827_28
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30204..31514)
DNA (1311bp) protein (437aa)
gltA; type II citrate synthase (EC:2.3.3.1); K01647 citrate synthase [EC:2.3.3.1] id=7719557 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369, ECO:0000256|RuleBase:RU003370}; EC=2.3.3.16 {ECO:0000256|RuleBase:RU003370};; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbact
type II citrate synthase
scnpilot_expt_750_p_scaffold_827_29
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31588..32682)
DNA (1095bp) protein (365aa)
N-succinyldiaminopimelate aminotransferase n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI000288C713
Uncharacterized protein {ECO:0000313|EMBL:EAR24572.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
N-succinyldiaminopimelate aminotransferase
scnpilot_expt_750_p_scaffold_827_30
Curtobacterium flaccumfaciens, Curtobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32721..33041)
DNA (321bp) protein (107aa)
ferredoxin n=1 Tax=Curtobacterium sp. B18 RepID=UPI00034BF53E
Ferredoxin {ECO:0000313|EMBL:EYT57371.1}; TaxID=1292022 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Curtobacterium.;" source="Curtobacterium flaccumfaciens UCD-AKU.;"
ferredoxin
Displaying items 1-30 of 38 in total

View Taxonomy