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scnpilot_expt_750_p_scaffold_1101

Search features with annotation key words

Displaying items 1-30 of 71 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_p_scaffold_1101_1
unknown

Not on your lists

comp(3..74)
DNA (72bp) protein (24aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_1101_2
Streptomyces sp. 150FB, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(138..608)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Arthrobacter crystallopoietes BAB-32 RepID=N1V6I4_9MICC
ATPase {ECO:0000313|EMBL:KIF74776.1}; TaxID=1576605 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. 150FB.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_1101_3
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(633..1097)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Rhodococcus opacus M213 RepID=K8XLQ6_RHOOP
Uncharacterized protein {ECO:0000313|EMBL:EKT81771.1}; TaxID=1129896 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus M213.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_1101_4
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1213..1677)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Arthrobacter sp. SJCon RepID=L8TMY2_9MICC
Uncharacterized protein {ECO:0000313|EMBL:KDA06532.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_1101_5
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1825..2898)
DNA (1074bp) protein (358aa)
Ribosome-binding ATPase YchF n=1 Tax=Microbacterium sp. TS-1 RepID=U2XI97_9MICO
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
ychF; GTP-dependent nucleic acid-binding protein EngD
scnpilot_expt_750_p_scaffold_1101_6
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2945..3316
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002F46FA0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL47429.1}; TaxID=644283 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strai
scnpilot_expt_750_p_scaffold_1101_7
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3375..3860
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035C88E9
outer membrane receptor proteins, mostly Fe transport
Outer membrane receptor proteins, mostly Fe transport {ECO:0000313|EMBL:BAJ74772.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microba
scnpilot_expt_750_p_scaffold_1101_8
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3814..6285)
DNA (2472bp) protein (824aa)
E1-E2 ATPase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RWY4_LEIAQ rbh
E1-E2 ATPase {ECO:0000313|EMBL:ERK73276.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
cation-transporting ATPase E1-E2 family
scnpilot_expt_750_p_scaffold_1101_9
Leucobacter sp. UCD-THU, Leucobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6431..7264)
DNA (834bp) protein (278aa)
hypothetical protein id=7719392 bin=CNBR_ACT species=Microbacterium laevaniformans genus=Microbacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
ABC transporter permease {ECO:0000313|EMBL:EYT54892.1}; TaxID=1292023 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter sp. UCD-THU.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_1101_10
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7261..8130)
DNA (870bp) protein (290aa)
ABC transporter ATP-binding protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B4BF34
Uncharacterized protein {ECO:0000313|EMBL:KJC64364.1}; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;"
ABC transporter-like protein
scnpilot_expt_750_p_scaffold_1101_11
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8284..8874
DNA (591bp) protein (197aa)
Exonuclease n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RL09_LEIAQ
Exonuclease {ECO:0000313|EMBL:ERK69546.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
DNA polymerase III subunit epsilon
scnpilot_expt_750_p_scaffold_1101_12
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8952..10328
DNA (1377bp) protein (459aa)
DNA recombination protein RmuC n=1 Tax=Leifsonia rubra CMS 76R RepID=S7VYJ9_9MICO
DNA recombination protein RmuC {ECO:0000313|EMBL:EPR75211.1}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_1101_13
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10329..11315)
DNA (987bp) protein (329aa)
fructose 1,6-bisphosphatase n=1 Tax=Microbacteriaceae RepID=UPI000381E5D4
fructose 1,6-bisphosphatase II
Fructose-1,6-bisphosphatase {ECO:0000256|PIRNR:PIRNR004532}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DS
scnpilot_expt_750_p_scaffold_1101_14
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11382..12404
DNA (1023bp) protein (341aa)
fba; fructose-bisphosphate aldolase (EC:4.1.2.13)
fructose-bisphosphate aldolase n=1 Tax=Microbacterium barkeri RepID=UPI0002D2CC11
Fructose-bisphosphate aldolase {ECO:0000313|EMBL:KDA06523.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
scnpilot_expt_750_p_scaffold_1101_15
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12437..13441)
DNA (1005bp) protein (335aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxI
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Leifsonia xyli subsp. cynodontis DSM 46306 RepID=U3P810_LEIXC
4-hydroxy-3-methylbut-2-enyl diphosphate reductase
scnpilot_expt_750_p_scaffold_1101_16
Saccharopolyspora rectivirgula, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13544..14122
DNA (579bp) protein (193aa)
Bacterial regulatory protein, tetR family n=1 Tax=uncultured organism RepID=T1W5N9_9ZZZZ
TetR family transcriptional regulator {ECO:0000313|EMBL:KEI44958.1}; TaxID=28042 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspor
putative TetR-family transcriptional regulator
scnpilot_expt_750_p_scaffold_1101_17
Agrococcus pavilionensis, Agrococcus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14172..14987
DNA (816bp) protein (272aa)
hypothetical protein n=1 Tax=Arthrobacter sp. 135MFCol5.1 RepID=UPI00037CB03D
Uncharacterized protein {ECO:0000313|EMBL:ERG64702.1}; TaxID=1330458 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agrococcus.;" source="Agrococcus pavilionensis RW1.;"
short-chain dehydrogenase
scnpilot_expt_750_p_scaffold_1101_18
Cryobacterium roopkundense, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15043..16230
DNA (1188bp) protein (396aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclea
xseA; exodeoxyribonuclease VII large subunit (EC:3.1.11.6)
exodeoxyribonuclease VII large subunit n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B4018D
scnpilot_expt_750_p_scaffold_1101_19
Leucobacter komagatae, Leucobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16314..16544
DNA (231bp) protein (77aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclea
exodeoxyribonuclease VII small subunit n=1 Tax=Agromyces italicus RepID=UPI0003B5AE69
exodeoxyribonuclease VII small subunit
scnpilot_expt_750_p_scaffold_1101_20
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16541..17131
DNA (591bp) protein (197aa)
hypothetical protein
hypothetical protein id=7719601 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Uncharacterized protein {ECO:0000313|EMBL:ERK70778.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
scnpilot_expt_750_p_scaffold_1101_21
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17128..17751
DNA (624bp) protein (208aa)
Carbonic anhydrase {ECO:0000256|RuleBase:RU003956}; EC=4.2.1.1 {ECO:0000256|RuleBase:RU003956};; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agr
hypothetical protein n=1 Tax=Microbacterium RepID=UPI00035EED95
carbonic anhydrase
scnpilot_expt_750_p_scaffold_1101_22
Curtobacterium flaccumfaciens, Curtobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17806..19218
DNA (1413bp) protein (471aa)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=1292022 species="Bacteria; Acti
aspartate ammonia-lyase n=1 Tax=Curtobacterium sp. B8 RepID=UPI0003B4A1B5
fumC; fumarase
scnpilot_expt_750_p_scaffold_1101_23
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19260..20363)
DNA (1104bp) protein (368aa)
hypothetical protein n=1 Tax=Nesterenkonia alba RepID=UPI0003B34CE0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFA48495.1}; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain AT
scnpilot_expt_750_p_scaffold_1101_24
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20438..21010)
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Bacillus fordii RepID=UPI00037246FF
TetR family transcriptional regulator
TetR family transcriptional regulator {ECO:0000313|EMBL:AJE04316.1}; TaxID=345632 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geoba
scnpilot_expt_750_p_scaffold_1101_25
Arthrobacter sp. 11W110_air, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21092..22015)
DNA (924bp) protein (308aa)
hypothetical protein n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B7B14B
Uncharacterized protein {ECO:0000313|EMBL:CEA07148.1}; TaxID=1461584 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. 11W110_air.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_1101_26
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22062..22823)
DNA (762bp) protein (254aa)
Fumarate hydratase {ECO:0000313|EMBL:EAR24524.1}; EC=4.2.1.2 {ECO:0000313|EMBL:EAR24524.1};; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
Fumarate hydratase id=7719604 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
hypothetical protein
scnpilot_expt_750_p_scaffold_1101_27
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22866..24236)
DNA (1371bp) protein (457aa)
PhoH family protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T7U6_LEIAQ
ATP-binding protein {ECO:0000313|EMBL:KJC65913.1}; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;"
phoH; PhoH-like protein
scnpilot_expt_750_p_scaffold_1101_28
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24364..25137)
DNA (774bp) protein (258aa)
uppS; undecaprenyl pyrophosphate synthetase; K12503 short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68] id=7719607 bin=CNBR_ACT species=Leifsonia xyli genus=Leifsonia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;"
undecaprenyl pyrophosphate synthetase
scnpilot_expt_750_p_scaffold_1101_29
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25161..25853
DNA (693bp) protein (231aa)
DNA-binding protein n=1 Tax=Agromyces italicus RepID=UPI0003B40533
Uncharacterized protein {ECO:0000313|EMBL:CDK00148.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
membrane protein, hemolysin III homolog
scnpilot_expt_750_p_scaffold_1101_30
Dermacoccus sp. Ellin185, Dermacoccus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25870..26352)
DNA (483bp) protein (161aa)
transcription elongation factor; K03624 transcription elongation factor GreA id=7719612 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
transcription elongation factor GreA
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00003926}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=188626 species="Bacteria
Displaying items 1-30 of 71 in total

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