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scnpilot_expt_750_p_scaffold_1166

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_p_scaffold_1166_1
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(3..602)
DNA (600bp) protein (200aa)
recombinase RecA n=1 Tax=Microbacterium yannicii RepID=UPI0002E4AB21
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=162426 species="Bacteria; Actinobac
recA; recombinase A
scnpilot_expt_750_p_scaffold_1166_2
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(885..1457)
DNA (573bp) protein (191aa)
Glycoside hydrolase family 5 n=2 Tax=Microbacterium RepID=H8E249_9MICO
Tax=CG_TM7_01
scnpilot_expt_750_p_scaffold_1166_3
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1505..1729)
DNA (225bp) protein (75aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI00034DA224
Uncharacterized protein {ECO:0000313|EMBL:KIC56465.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_1166_4
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1751..2122)
DNA (372bp) protein (124aa)
Transcriptional regulator, Cro/CI family id=7719178 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Uncharacterized protein {ECO:0000313|EMBL:EAR25197.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
DNA-binding protein
scnpilot_expt_750_p_scaffold_1166_5
Curtobacterium flaccumfaciens, Curtobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2261..2785)
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Curtobacterium flaccumfaciens RepID=UPI000369CC03
Damage-inducible protein CinA {ECO:0000313|EMBL:EYT63816.1}; TaxID=1292022 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Curtobacterium.;" source="Curtobacterium flaccumfaciens
hypothetical protein
scnpilot_expt_750_p_scaffold_1166_6
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2778..3500)
DNA (723bp) protein (241aa)
pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5)
hypothetical protein n=1 Tax=Pseudoclavibacter faecalis RepID=UPI00035C5C76
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:EAR25195.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
scnpilot_expt_750_p_scaffold_1166_7
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3536..3946
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Catelliglobosispora koreensis RepID=UPI00036F95D3
Uncharacterized protein {ECO:0000313|EMBL:AKC88037.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxantho
hypothetical protein
scnpilot_expt_750_p_scaffold_1166_8
Rhodococcus sp. AD45, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4011..4763
DNA (753bp) protein (251aa)
N-hydroxyarylamine O-acetyltransferase {ECO:0000313|EMBL:KJF23708.1}; EC=2.3.1.118 {ECO:0000313|EMBL:KJF23708.1};; TaxID=103808 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhod
acetyltransferase (EC:2.3.1.-)
Putative acetyltransferase n=1 Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XI47_MICPN
scnpilot_expt_750_p_scaffold_1166_9
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4852..7581)
DNA (2730bp) protein (910aa)
Cell division protein id=7719181 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Uncharacterized protein {ECO:0000313|EMBL:AGW41880.1}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 4630
cell division protein
scnpilot_expt_750_p_scaffold_1166_10
Cryobacterium sp. MLB-32, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7661..8869)
DNA (1209bp) protein (403aa)
Efflux ABC transporter, permease component id=7719182 bin=CNBR_ACT species=Clavibacter michiganensis genus=Clavibacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Cell division protein FtsX {ECO:0000313|EMBL:KFF59552.1}; TaxID=1529318 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium sp. MLB-32.;"
peptide ABC transporter permease
scnpilot_expt_750_p_scaffold_1166_11
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8866..9591)
DNA (726bp) protein (242aa)
ATP-binding protein of ABC transporter n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AHI6_9ACTN
ATP-binding protein of ABC transporter {ECO:0000313|EMBL:EAR25192.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
ABC transporter ATP-binding protein
scnpilot_expt_750_p_scaffold_1166_12
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9588..10559)
DNA (972bp) protein (324aa)
Membrane-fusion protein n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N9D5_MICTS
membrane-fusion protein
Membrane-fusion protein {ECO:0000313|EMBL:BAJ75781.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB
scnpilot_expt_750_p_scaffold_1166_13
Brachybacterium muris, Brachybacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10641..11345)
DNA (705bp) protein (235aa)
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00114};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256
deoxyribose-phosphate aldolase (EC:4.1.2.4)
deoxyribose-phosphate aldolase n=1 Tax=Brachybacterium muris RepID=UPI0003462B23
scnpilot_expt_750_p_scaffold_1166_14
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11363..13039)
DNA (1677bp) protein (559aa)
Putative uncharacterized protein id=7719189 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Uncharacterized protein {ECO:0000313|EMBL:EAR25190.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
metallo-beta-lactamase family hydrolase
scnpilot_expt_750_p_scaffold_1166_15
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13043..14017)
DNA (975bp) protein (325aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086366}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:M
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N9N0_MICTS
dihydrodipicolinate synthase/N-acetylneuraminate lyase
scnpilot_expt_750_p_scaffold_1166_16
Mycobacterium avium, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14066..14467)
DNA (402bp) protein (134aa)
Pyridoxamine 5'-phosphate oxidase n=1 Tax=Mycobacterium avium subsp. hominissuis 10-5606 RepID=V7MQP5_MYCAV
Pyridoxamine 5'-phosphate oxidase {ECO:0000313|EMBL:ETB36098.1}; TaxID=1381559 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).
putative F420-dependent protein
scnpilot_expt_750_p_scaffold_1166_17
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14513..15457)
DNA (945bp) protein (315aa)
L-glyceraldehyde 3-phosphate reductase {ECO:0000313|EMBL:KJL21000.1}; EC=1.1.1.- {ECO:0000313|EMBL:KJL21000.1};; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Micro
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KRZ8_9MICO
oxidoreductase
scnpilot_expt_750_p_scaffold_1166_18
actinobacterium acMicro-1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15519..16253)
DNA (735bp) protein (245aa)
Thymidylate synthase ThyX {ECO:0000256|HAMAP-Rule:MF_01408}; Short=TS {ECO:0000256|HAMAP-Rule:MF_01408};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_01408};; EC=2.1.1.148 {ECO:0000256|HAMAP-Rule:MF_01408}
thymidylate synthase, flavin-dependent (EC:2.1.1.148)
hypothetical protein n=1 Tax=Microbacterium sp. 11MF RepID=UPI00037F08FC rbh
scnpilot_expt_750_p_scaffold_1166_19
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16454..16894
DNA (441bp) protein (147aa)
Thiol-disulfide isomerase and thioredoxins n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N9N5_MICTS
thiol-disulfide isomerase and thioredoxins
Thiol-disulfide isomerase and thioredoxins {ECO:0000313|EMBL:BAJ73282.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium tes
scnpilot_expt_750_p_scaffold_1166_20
actinobacterium acMicro-1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16894..17403
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E3N7_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KGA06380.1}; TaxID=1504316 species="Bacteria; Actinobacteria.;" source="actinobacterium acMicro-1.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_1166_21
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17415..17690)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E7G6_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EXJ53002.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_1166_22
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17708..19384)
DNA (1677bp) protein (559aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AF11_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD85280.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 st
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
scnpilot_expt_750_p_scaffold_1166_23
unknown

Not on your lists

19584..19766
DNA (183bp) protein (61aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_1166_24
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19857..20252
DNA (396bp) protein (132aa)
ATP/GTP binding protein id=7719194 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Peroxiredoxin, OsmC subfamily {ECO:0000313|EMBL:EIC09272.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans
redox protein, regulator of disulfide bond formation
scnpilot_expt_750_p_scaffold_1166_25
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20262..20732)
DNA (471bp) protein (157aa)
Putative uncharacterized protein id=7719196 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Uncharacterized protein {ECO:0000313|EMBL:EAR25184.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_1166_26
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20732..21460)
DNA (729bp) protein (243aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|SAAS:SAAS00018068}; EC=1.17.1.8 {ECO:0000256|SAAS:SAAS00018030};; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriac
dihydrodipicolinate reductase n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI00036034F4
dihydrodipicolinate reductase
scnpilot_expt_750_p_scaffold_1166_27
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21506..23482)
DNA (1977bp) protein (659aa)
Uncharacterized protein n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0K5H8_SACES
Uncharacterized protein {ECO:0000313|EMBL:CCH32857.1}; TaxID=1179773 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strai
hypothetical protein
scnpilot_expt_750_p_scaffold_1166_28
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23736..25067)
DNA (1332bp) protein (444aa)
Putative protease n=1 Tax=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM 20744 / JCM 9667 / LMG 2889 / C-1) RepID=B0RGX3_CLAMS
protease
Putative protease {ECO:0000313|EMBL:CAQ01307.1}; TaxID=31964 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. sepedonicus (s
scnpilot_expt_750_p_scaffold_1166_29
Frigoribacterium sp. MEB024, Frigoribacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26204..27184)
DNA (981bp) protein (327aa)
oxidoreductase n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI000287DBC7
Contig_81, whole genome shotgun sequence {ECO:0000313|EMBL:KIU02231.1}; TaxID=1589899 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Frigoribacterium.;" source="Frigoribacterium
oxidoreductase
scnpilot_expt_750_p_scaffold_1166_30
Leucobacter sp. UCD-THU, Leucobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27341..29611)
DNA (2271bp) protein (757aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595, ECO:0000256|SAAS:SAAS00274805}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595, ECO:0000256|SAAS:SAAS00274803};; Polynucleotide
pnpA; polynucleotide phosphorylase/polyadenylase (EC:2.7.7.8)
polynucleotide phosphorylase n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B62791
Displaying items 1-30 of 32 in total

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