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scnpilot_expt_750_p_scaffold_1466

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_p_scaffold_1466_1
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3..1292)
DNA (1290bp) protein (430aa)
Uncharacterized protein id=7719258 bin=CNBR_ACT species=Microbacterium testaceum genus=Microbacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
hypothetical protein
Conserved membrane protein {ECO:0000313|EMBL:CAN00357.1}; TaxID=443906 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. mich
scnpilot_expt_750_p_scaffold_1466_2
Arthrobacter sp. 11W110_air, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1401..2168
DNA (768bp) protein (256aa)
Glycosyl transferase id=7719259 bin=CNBR_ACT species=Dietzia cinnamea genus=Dietzia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Putative glycosyl transferase {ECO:0000313|EMBL:CEA08000.1}; TaxID=1461584 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. 11W110_air.;"
rhamnosyltransferase
scnpilot_expt_750_p_scaffold_1466_3
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2165..2944
DNA (780bp) protein (260aa)
Glycosyl transferase id=7719259 bin=CNBR_ACT species=Dietzia cinnamea genus=Dietzia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Uncharacterized protein {ECO:0000313|EMBL:KHK98946.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
rhamnosyltransferase
scnpilot_expt_750_p_scaffold_1466_4
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2988..3971)
DNA (984bp) protein (328aa)
alpha/beta hydrolase n=1 Tax=Humibacter albus RepID=UPI0003B4E237
Putative aminoacrylate hydrolase RutD {ECO:0000313|EMBL:KJL44948.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengi
hypothetical protein
scnpilot_expt_750_p_scaffold_1466_5
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

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comp(4008..6113)
DNA (2106bp) protein (702aa)
ATP-dependent RNA helicase id=7719265 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
ATP-dependent RNA helicase {ECO:0000313|EMBL:EAR25155.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
helicase
scnpilot_expt_750_p_scaffold_1466_6
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6292..7614
DNA (1323bp) protein (441aa)
Succinyl-diaminopimelate desuccinylase {ECO:0000313|EMBL:KJL35068.1}; EC=3.5.1.18 {ECO:0000313|EMBL:KJL35068.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Micr
acetylornithine deacetylase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034D2455
acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase
scnpilot_expt_750_p_scaffold_1466_7
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7657..8586)
DNA (930bp) protein (310aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=400772 species="Bacteria; Actinobacter
riboflavin kinase n=1 Tax=Agromyces subbeticus RepID=UPI0003B50C4A
ribF; riboflavin kinase/FMN adenyltransferase
scnpilot_expt_750_p_scaffold_1466_8
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8583..9056)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RPE0_LEIAQ
Uncharacterized protein {ECO:0000313|EMBL:ERK70711.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_1466_9
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9062..9439)
DNA (378bp) protein (126aa)
hypothetical protein n=1 Tax=Pseudoclavibacter faecalis RepID=UPI00035EBCF7
Membrane protein {ECO:0000313|EMBL:KHK96207.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
glycogen synthase
scnpilot_expt_750_p_scaffold_1466_10
Leucobacter sp. UCD-THU, Leucobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9440..10426)
DNA (987bp) protein (329aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043744}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043720};; tRNA pseudouridine(55) s
truB; tRNA pseudouridine synthase B (EC:4.2.1.70)
hypothetical protein n=1 Tax=Leucobacter sp. UCD-THU RepID=UPI000362F010 rbh
scnpilot_expt_750_p_scaffold_1466_11
Cryobacterium roopkundense, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10463..10759)
DNA (297bp) protein (99aa)
hypothetical protein n=1 Tax=Microbacteriaceae RepID=UPI0003755BAA
Type VII secretion protein {ECO:0000313|EMBL:KGJ82328.1}; TaxID=1001240 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium roopkundense.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_1466_12
unknown

Not on your lists

comp(10741..11358)
DNA (618bp) protein (206aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_1466_13
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11345..12892)
DNA (1548bp) protein (516aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AA04_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC07112.1}; Flags: Precursor;; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium la
hypothetical protein
scnpilot_expt_750_p_scaffold_1466_14
unknown

Not on your lists

comp(12889..13191)
DNA (303bp) protein (101aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_1466_15
Cryobacterium roopkundense, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13231..17820)
DNA (4590bp) protein (1530aa)
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI0003753965
Phosphopeptide-binding protein {ECO:0000313|EMBL:KGJ82327.1}; TaxID=1001240 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium roopkundense.;"
FHA domain-containing protein
scnpilot_expt_750_p_scaffold_1466_16
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17873..18895
DNA (1023bp) protein (341aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifson
2-dehydropantoate 2-reductase n=1 Tax=Leifsonia xyli subsp. cynodontis DSM 46306 RepID=U3P7N8_LEIXC rbh
2-dehydropantoate 2-reductase
scnpilot_expt_750_p_scaffold_1466_17
Curtobacterium flaccumfaciens, Curtobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18892..19773
DNA (882bp) protein (294aa)
adenine glycosylase n=1 Tax=Curtobacterium sp. B18 RepID=UPI0003B5C592
Adenine glycosylase {ECO:0000313|EMBL:EYT66818.1}; TaxID=1292022 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Curtobacterium.;" source="Curtobacterium flaccumfaciens UCD-AKU.;"
adenine glycosylase
scnpilot_expt_750_p_scaffold_1466_18
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19780..20094)
DNA (315bp) protein (105aa)
Transcriptional regulator, TetR family id=7719286 bin=CNBR_ACT species=Rothia dentocariosa genus=Rothia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ERK70708.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14
hypothetical protein
Displaying 18 items

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