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scnpilot_expt_750_p_scaffold_1978

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_p_scaffold_1978_1
Agrococcus pavilionensis, Agrococcus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2..2077
DNA (2076bp) protein (692aa)
phosphomannomutase n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B46B4F
Uncharacterized protein {ECO:0000313|EMBL:ERG64888.1}; TaxID=1330458 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agrococcus.;" source="Agrococcus pavilionensis RW1.;"
cpsG; phosphomannomutase
scnpilot_expt_750_p_scaffold_1978_2
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2087..3373
DNA (1287bp) protein (429aa)
Malic enzyme n=1 Tax=Pseudomonas stutzeri DSM 10701 RepID=I6Z157_PSEST rbh
malic enzyme
Uncharacterized protein {ECO:0000313|EMBL:AFN76617.1}; TaxID=1123519 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutz
scnpilot_expt_750_p_scaffold_1978_3
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3383..4483)
DNA (1101bp) protein (367aa)
addA; adenosine deaminase (EC:3.5.4.4)
adenosine deaminase n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI0003741ED6
Adenosine deaminase {ECO:0000313|EMBL:ERK73418.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
scnpilot_expt_750_p_scaffold_1978_4
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(4588..5880)
DNA (1293bp) protein (431aa)
deoA; thymidine phosphorylase (EC:2.4.2.4); K00758 thymidine phosphorylase [EC:2.4.2.4] id=7719819 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Thymidine phosphorylase {ECO:0000313|EMBL:EPR75323.1}; EC=2.4.2.4 {ECO:0000313|EMBL:EPR75323.1};; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source
thymidine phosphorylase
scnpilot_expt_750_p_scaffold_1978_5
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(5910..6338)
DNA (429bp) protein (143aa)
cdd; cytidine deaminase (EC:3.5.4.5); K01489 cytidine deaminase [EC:3.5.4.5] id=7719820 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Cytidine deaminase {ECO:0000313|EMBL:EPR75324.1}; EC=3.5.4.5 {ECO:0000313|EMBL:EPR75324.1};; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Lei
cddA; cytidine deaminase (EC:3.5.4.5)
scnpilot_expt_750_p_scaffold_1978_6
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(6399..7679)
DNA (1281bp) protein (427aa)
ABC transporter permease n=1 Tax=Leifsonia xyli subsp. cynodontis DSM 46306 RepID=U3P4H6_LEIXC
Uncharacterized protein {ECO:0000313|EMBL:CDJ98870.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
ABC transporter permease
scnpilot_expt_750_p_scaffold_1978_7
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7676..8911)
DNA (1236bp) protein (412aa)
Uncharacterized protein n=1 Tax=Candidatus Aquiluna sp. IMCC13023 RepID=I0R2G0_9MICO rbh
Inner-membrane translocator {ECO:0000313|EMBL:CDJ98871.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
Ribose ABC transport system, permease protein RbsC
scnpilot_expt_750_p_scaffold_1978_8
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8926..10425)
DNA (1500bp) protein (500aa)
monosaccharide-transporting ATPase (EC:3.6.3.17)
Monosaccharide-transporting ATPase n=1 Tax=Isoptericola variabilis (strain 225) RepID=F6FPW0_ISOV2
Putative sugar transport protein (ABC superfamily atp_bind) {ECO:0000313|EMBL:CDJ98872.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="
scnpilot_expt_750_p_scaffold_1978_9
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10517..11626)
DNA (1110bp) protein (370aa)
Uncharacterized protein n=1 Tax=Candidatus Aquiluna sp. IMCC13023 RepID=I0R2F8_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:CDJ98873.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
substrate-binding transport lipoprotein
scnpilot_expt_750_p_scaffold_1978_10
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

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comp(11787..12908)
DNA (1122bp) protein (374aa)
mannose-1-phosphate guanylyltransferase n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI000289261D
Mannose-1-phosphate guanylyltransferase {ECO:0000313|EMBL:EAR24186.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
mannose-1-phosphate guanylyltransferase
scnpilot_expt_750_p_scaffold_1978_11
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12945..13412
DNA (468bp) protein (156aa)
sdhC; succinate dehydrogenase, cytochrome b subunit (EC:1.3.99.1)
Succinate dehydrogenase, cytochrome b-556 subunit n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AKF6_9ACTN
Succinate dehydrogenase, cytochrome b-556 subunit {ECO:0000313|EMBL:EAR24184.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
scnpilot_expt_750_p_scaffold_1978_12
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13412..13888
DNA (477bp) protein (159aa)
sdhD; succinate dehydrogenase hydrophobic membrane anchor protein; K00242 succinate dehydrogenase membrane anchor subunit id=7719829 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Succinate dehydrogenase, membrane subunit {ECO:0000313|EMBL:EAR24183.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
sdhD; succinate dehydrogenase, hydrophobic anchor subunit
scnpilot_expt_750_p_scaffold_1978_13
Leucobacter sp. UCD-THU, Leucobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13899..14729
DNA (831bp) protein (277aa)
Succinate dehydrogenase flavoprotein subunit {ECO:0000256|RuleBase:RU362051}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU362051};; TaxID=1292023 species="Bacteria; Actinobacteria; Micrococcales; Microbacteria
succinate dehydrogenase n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B31172
fumarate reductase
Displaying 13 items

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