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scnpilot_expt_750_p_scaffold_477_111

Organism: SCNPILOT_EXPT_750_P_Actinomycetales_72_13

near complete RP 52 / 55 BSCG 51 / 51 MC: 1 ASCG 14 / 38
Location: 115691..116479

Top 3 Functional Annotations

Value Algorithm Source
ABC-2 type transporter; K09694 lipooligosaccharide transport system permease protein id=7719845 bin=CNBR_ACT species=Cellulomonas fimi genus=Cellulomonas taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 69.5
  • Coverage: 262.0
  • Bit_score: 367
  • Evalue 1.00e-98
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.7
  • Coverage: 260.0
  • Bit_score: 359
  • Evalue 5.20e-96
ABC-2 type transporter similarity KEGG
DB: KEGG
  • Identity: 67.7
  • Coverage: 260.0
  • Bit_score: 356
  • Evalue 6.80e-96

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Taxonomy

Microbacterium sp. TS-1 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 789
ATGAGCGCGGTCTCCGCCCTGTCCTCGGGCAACGCCAGGGCCGTGTTCGGCCGGAACCTGGTCGGCGCGCGCGGCGTGAACCTCTGGGTCATGGTCAGCGGCTTCTTCGAGCCGGTGTTCTACCTCGTCGCGCTCGGCGCCGGCCTCGGCGGCCTGATCGGCGTCGTCGCGCTGCCCGACGGGCGCGAGGTGCCGTACGCCGCGTTCATCGCCCCCGGGCTGCTCGCGGTCTCCGCGATGAACGGCGCGATCGCCGACTCGACGTGGAACGTCTTCTTCAAGATGCGCTTCATGCGGGTCTACGACGCGATGCTCGCGACGCGGCTCGGCCCGCTCGACGTCGCGCTCGGCGAGATCTCCTGGGCGCTGTTCCGCGGGGCGGTGTACGCGAGCGCGTTCCTGATCGTCATGCAGTGCTTCGGGCTCAACCTCGCCTGGACCGCGGTCCTCGCGATCCCCGCGGCCGTCCTGATCGGCTTCGGCTTCGCGGCGGTCGGGATGGGGATCACCTCCTGCCTGCGGACCTTCCAGCAGATGGACTGGATCCAGTTCGCGCTGCTGCCGATGTTCATGCTCTCGGGGACGTTCTTCCCGATCTCGCTCTACCCGGAGTGGGTGCAGTGGATCGTCCAGGCGCTGCCCCTGTGGCACGGCATCGAGCTCGTCCGCGGGCTCACCACCGGCGCGCTCTCCTGGGGCATGCTGCTGCACGTCGGCTACTTCGCCGTGATGGTCGTGCTCGGGCTGGTGTTCACCACCCGCCGGCTGCGGGCGCTGTTCCTGACCTAG
PROTEIN sequence
Length: 263
MSAVSALSSGNARAVFGRNLVGARGVNLWVMVSGFFEPVFYLVALGAGLGGLIGVVALPDGREVPYAAFIAPGLLAVSAMNGAIADSTWNVFFKMRFMRVYDAMLATRLGPLDVALGEISWALFRGAVYASAFLIVMQCFGLNLAWTAVLAIPAAVLIGFGFAAVGMGITSCLRTFQQMDWIQFALLPMFMLSGTFFPISLYPEWVQWIVQALPLWHGIELVRGLTTGALSWGMLLHVGYFAVMVVLGLVFTTRRLRALFLT*