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scnpilot_expt_750_p_scaffold_200_curated

Search features with annotation key words

Displaying items 1-30 of 142 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_p_scaffold_200_curated_1
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..339)
DNA (339bp) protein (113aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Comamonas testosteroni ATCC 11996 RepID=H1RVW8_COMTE
Putative uncharacterized protein {ECO:0000313|EMBL:EHN63315.1}; Flags: Fragment;; TaxID=1009852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni ATCC 11996.;"
filamentous hemagglutinin outer membrane protein
filamentous hemagglutinin outer membrane protein
scnpilot_expt_750_p_scaffold_200_curated_2
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(895..1968)
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y8M3_SORCE
hypothetical protein
hypothetical protein
hypothetical protein
scnpilot_expt_750_p_scaffold_200_curated_3
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2232..4019)
DNA (1788bp) protein (596aa)
cysteine desulfurase 1; K11717 cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
cysteine desulfurase 1; K11717 cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
cysteine desulfurase 1; K11717 cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
Cysteine desulfurase {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216};; TaxID=342108 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magneticum (strain AMB-1 / ATCC 700264).;"
scnpilot_expt_750_p_scaffold_200_curated_4
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4006..4938)
DNA (933bp) protein (311aa)
SRPI protein n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W671_MAGSA
SRPI protein
SRPI protein
SRPI protein
scnpilot_expt_750_p_scaffold_200_curated_5
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5224..5841)
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Ralstonia solanacearum (strain GMI1000) RepID=Q8XZQ1_RALSO
hypothetical protein; K07002
hypothetical protein; K07002
hypothetical protein; K07002
scnpilot_expt_750_p_scaffold_200_curated_6
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5838..6161)
DNA (324bp) protein (108aa)
Possible predicted diverged CheY-domain n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47E47_DECAR
diverged CheY-domain-containing protein
diverged CheY-domain-containing protein
diverged CheY-domain-containing protein
scnpilot_expt_750_p_scaffold_200_curated_7
Pelobacter propionicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6433..7041
DNA (609bp) protein (203aa)
Transcriptional regulator, TetR family n=2 Tax=Bacteria RepID=A0R856_PELPD
TetR family transcriptional regulator
TetR family transcriptional regulator
TetR family transcriptional regulator
scnpilot_expt_750_p_scaffold_200_curated_8
Pelobacter propionicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7038..8189
DNA (1152bp) protein (384aa)
Efflux transporter, RND family, MFP subunit n=2 Tax=Bacteria RepID=A0R855_PELPD
RND family efflux transporter MFP subunit
RND family efflux transporter MFP subunit
RND family efflux transporter MFP subunit
scnpilot_expt_750_p_scaffold_200_curated_9
Pelobacter propionicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8186..9388
DNA (1203bp) protein (401aa)
Uncharacterized protein n=2 Tax=Proteobacteria RepID=A0R854_PELPD
hypothetical protein; K02004 putative ABC transport system permease protein
hypothetical protein; K02004 putative ABC transport system permease protein
hypothetical protein; K02004 putative ABC transport system permease protein
scnpilot_expt_750_p_scaffold_200_curated_10
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9393..10103
DNA (711bp) protein (237aa)
ABC transporter related n=2 Tax=Comamonadaceae RepID=A9BTQ7_DELAS
ABC transporter-like protein; K02003 putative ABC transport system ATP-binding protein
ABC transporter-like protein; K02003 putative ABC transport system ATP-binding protein
ABC transporter-like protein; K02003 putative ABC transport system ATP-binding protein
scnpilot_expt_750_p_scaffold_200_curated_11
Shewanella decolorationis, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10132..11601
DNA (1470bp) protein (490aa)
RND efflux system outer membrane lipoprotein n=1 Tax=Shewanella decolorationis S12 RepID=V1DKC7_9GAMM
RND efflux system outer membrane lipoprotein {ECO:0000313|EMBL:ESE41430.1}; TaxID=1353536 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella decolorationis S12.;"
RND efflux system outer membrane lipoprotein
RND efflux system outer membrane lipoprotein
scnpilot_expt_750_p_scaffold_200_curated_12
unknown

Not on your lists

11847..12182
DNA (336bp) protein (112aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_200_curated_13
Candidatus Accumulibacter sp. SK-01, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12305..13333
DNA (1029bp) protein (343aa)
Sulfate ABC transporter, periplasmic sulfate-binding protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RJL4_ACCPU
Sulfate starvation-induced protein 2 {ECO:0000313|EMBL:KFB66397.1}; Flags: Precursor;; TaxID=1457154 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-01.;"
sulfate ABC transporter periplasmic sulfate-binding protein; K02048 sulfate transport system substrate-binding protein
sulfate ABC transporter periplasmic sulfate-binding protein; K02048 sulfate transport system substrate-binding protein
scnpilot_expt_750_p_scaffold_200_curated_14
RBG_16_Betaproteobacteria_56_24_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13574..14374)
DNA (801bp) protein (267aa)
hypothetical protein, partial n=1 Tax=SAR324 cluster bacterium SCGC AB-629-J17 RepID=UPI0003693EA1
Sel1 domain-containing protein repeat-containing protein; K07126
Sel1 domain-containing protein repeat-containing protein; K07126
Sel1 domain-containing protein repeat-containing protein; K07126
scnpilot_expt_750_p_scaffold_200_curated_15
Desulfobulbus sp. Tol-SR, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14526..15137)
DNA (612bp) protein (204aa)
TetR family transcriptional regulator {ECO:0000313|EMBL:KGO33173.1}; TaxID=1536652 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus sp. Tol-SR.;"
TetR family transcriptional regulator id=12551165 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
TetR family transcriptional regulator
TetR family transcriptional regulator
scnpilot_expt_750_p_scaffold_200_curated_16
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15259..16716
DNA (1458bp) protein (486aa)
Outer membrane multidrug resistance lipoprotein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BUJ2_9BURK
Multidrug transporter {ECO:0000313|EMBL:AJY68876.1}; TaxID=35554 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurreducens.;"
Outer membrane component of tripartite multidrug resistance system
Outer membrane component of tripartite multidrug resistance system
scnpilot_expt_750_p_scaffold_200_curated_17
Geobacter soli, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16735..17856
DNA (1122bp) protein (374aa)
Membrane fusion component of tripartite multidrug resistance system n=2 Tax=Ralstonia solanacearum RepID=M4UCD2_RALSL
Hemolysin D {ECO:0000313|EMBL:KIE41556.1}; TaxID=1510391 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter soli.;"
Membrane fusion component of tripartite multidrug resistance system
Membrane fusion component of tripartite multidrug resistance system
scnpilot_expt_750_p_scaffold_200_curated_18
Geobacter soli, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17872..19437
DNA (1566bp) protein (522aa)
Multidrug resistance protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HTY8_RUBGI
Multidrug resistance protein B {ECO:0000313|EMBL:KIE44119.1}; TaxID=1510391 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter soli.;"
multidrug resistance protein; K03446 MFS transporter, DHA2 family, multidrug resistance protein B
multidrug resistance protein; K03446 MFS transporter, DHA2 family, multidrug resistance protein B
scnpilot_expt_750_p_scaffold_200_curated_19
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19455..19898
DNA (444bp) protein (148aa)
Universal stress protein n=1 Tax=Azoarcus sp. KH32C RepID=H0PWG4_9RHOO
Sulfate transporter {ECO:0000313|EMBL:AJY68878.1}; TaxID=35554 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurreducens.;"
putative universal stress protein
putative universal stress protein
scnpilot_expt_750_p_scaffold_200_curated_20
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19986..20621)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Cupriavidus basilensis OR16 RepID=H1S704_9BURK
Cupriavidus basilensis strain 4G11 chromosome secondary, complete sequence {ECO:0000313|EMBL:AJG24918.1}; TaxID=68895 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis.;"
hypothetical protein
hypothetical protein
scnpilot_expt_750_p_scaffold_200_curated_21
unknown

Not on your lists

comp(20618..20854)
DNA (237bp) protein (79aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_200_curated_22
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21599..22486
DNA (888bp) protein (296aa)
Sulfate transport system permease protein probably n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K547_AZOSB
cysT; sulfate transporter permease; K02046 sulfate transport system permease protein
cysT; sulfate transporter permease; K02046 sulfate transport system permease protein
cysT; sulfate transporter permease; K02046 sulfate transport system permease protein
scnpilot_expt_750_p_scaffold_200_curated_23
Collimonas arenae, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22489..23424
DNA (936bp) protein (312aa)
sulfate ABC transporter permease n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI000302C76F
Sulfate transport system permease protein CysW {ECO:0000313|EMBL:AIY40714.1}; TaxID=279058 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas arenae.;"
cysW; sulfate transport system permease cysW; K02047 sulfate transport system permease protein
cysW; sulfate transport system permease cysW; K02047 sulfate transport system permease protein
scnpilot_expt_750_p_scaffold_200_curated_24
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23421..24533
DNA (1113bp) protein (371aa)
cysA; putative sulfate transport ATP-binding protein (EC:3.6.3.25); K02045 sulfate transport system ATP-binding protein [EC:3.6.3.25]
cysA; putative sulfate transport ATP-binding protein (EC:3.6.3.25); K02045 sulfate transport system ATP-binding protein [EC:3.6.3.25]
cysA; putative sulfate transport ATP-binding protein (EC:3.6.3.25); K02045 sulfate transport system ATP-binding protein [EC:3.6.3.25]
Sulfate/thiosulfate import ATP-binding protein CysA {ECO:0000256|HAMAP-Rule:MF_01701}; EC=3.6.3.25 {ECO:0000256|HAMAP-Rule:MF_01701, ECO:0000313|EMBL:CAL93950.1};; Sulfate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01701}; TaxID=62928 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. (strain BH72).;"
scnpilot_expt_750_p_scaffold_200_curated_25
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24543..25478
DNA (936bp) protein (312aa)
Regulatory protein, LysR:LysR, substrate-binding protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47E60_DECAR
transcriptional regulator CysB-like protein; K13635 LysR family transcriptional regulator, cys regulon transcriptional activator
transcriptional regulator CysB-like protein; K13635 LysR family transcriptional regulator, cys regulon transcriptional activator
transcriptional regulator CysB-like protein; K13635 LysR family transcriptional regulator, cys regulon transcriptional activator
scnpilot_expt_750_p_scaffold_200_curated_26
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25639..26532)
DNA (894bp) protein (298aa)
Putative hydrolase or acyltransferase of alpha/beta superfamily n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QII8_AZOSU
alpha/beta hydrolase
alpha/beta hydrolase
alpha/beta hydrolase
scnpilot_expt_750_p_scaffold_200_curated_27
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26544..29192)
DNA (2649bp) protein (883aa)
pepN; aminopeptidase N; K01256 aminopeptidase N [EC:3.4.11.2]
pepN; aminopeptidase N; K01256 aminopeptidase N [EC:3.4.11.2]
pepN; aminopeptidase N; K01256 aminopeptidase N [EC:3.4.11.2]
Aminopeptidase N n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RKH8_ACCPU
scnpilot_expt_750_p_scaffold_200_curated_28
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29244..29912)
DNA (669bp) protein (223aa)
Lipolytic protein G-D-S-L family n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RKH7_ACCPU
G-D-S-L family lipolytic protein
G-D-S-L family lipolytic protein
G-D-S-L family lipolytic protein
scnpilot_expt_750_p_scaffold_200_curated_29
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29921..30817)
DNA (897bp) protein (299aa)
protein-(glutamine-N5) methyltransferase, 50S ribosomal protein L3-specific; K07320 putative adenine-specific DNA-methyltransferase [EC:2.1.1.72]
protein-(glutamine-N5) methyltransferase, 50S ribosomal protein L3-specific; K07320 putative adenine-specific DNA-methyltransferase [EC:2.1.1.72]
protein-(glutamine-N5) methyltransferase, 50S ribosomal protein L3-specific; K07320 putative adenine-specific DNA-methyltransferase [EC:2.1.1.72]
50S ribosomal protein L3 glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02125}; Short=L3 MTase {ECO:0000256|HAMAP-Rule:MF_02125};; EC=2.1.1.298 {ECO:0000256|HAMAP-Rule:MF_02125};; N5-glutamine methyltransferase PrmB {ECO:0000256|HAMAP-Rule:MF_02125}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
scnpilot_expt_750_p_scaffold_200_curated_30
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30810..31964)
DNA (1155bp) protein (385aa)
succinyl-diaminopimelate desuccinylase; K01439 succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
succinyl-diaminopimelate desuccinylase; K01439 succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
succinyl-diaminopimelate desuccinylase; K01439 succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
Succinyl-diaminopimelate desuccinylase {ECO:0000256|HAMAP-Rule:MF_01690, ECO:0000256|SAAS:SAAS00082787}; Short=SDAP desuccinylase {ECO:0000256|HAMAP-Rule:MF_01690};; EC=3.5.1.18 {ECO:0000256|HAMAP-Rule:MF_01690, ECO:0000256|SAAS:SAAS00082783};; N-succinyl-LL-2,6-diaminoheptanedioate amidohydrolase {ECO:0000256|HAMAP-Rule:MF_01690}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
Displaying items 1-30 of 142 in total

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