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scnpilot_expt_750_p_scaffold_1474_curated

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_p_scaffold_1474_curated_1
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(305..1333)
DNA (1029bp) protein (343aa)
Integrase n=1 Tax=Pseudomonas aeruginosa VRFPA07 RepID=V8EFH8_PSEAI
DNA recombinase {ECO:0000313|EMBL:KFF32590.1}; TaxID=1262663 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa VRFPA01.;"
integrase family protein
integrase family protein
scnpilot_expt_750_p_scaffold_1474_curated_2
unknown

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2250..2834
DNA (585bp) protein (195aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_1474_curated_3
Pseudomonas sp. 12M76_air, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2887..4605
DNA (1719bp) protein (573aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=1461581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 12M76_air.;"
topA; DNA topoisomerase I (EC:5.99.1.2); K03168 DNA topoisomerase I [EC:5.99.1.2]
topA; DNA topoisomerase I (EC:5.99.1.2); K03168 DNA topoisomerase I [EC:5.99.1.2]
topA; DNA topoisomerase I (EC:5.99.1.2); K03168 DNA topoisomerase I [EC:5.99.1.2]
scnpilot_expt_750_p_scaffold_1474_curated_4
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4879..5169
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Burkholderia vietnamiensis AU4i RepID=U2HE82_BURVI
Uncharacterized protein {ECO:0000313|EMBL:AHY45250.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (Pseudomonas perfectomarina).;"
scnpilot_expt_750_p_scaffold_1474_curated_5
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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5561..5794
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QNR4_AZOSU
hypothetical protein
hypothetical protein
hypothetical protein
scnpilot_expt_750_p_scaffold_1474_curated_6
unknown

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6853..7356
DNA (504bp) protein (168aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_1474_curated_7
Ralstonia sp. AU12-08, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7377..7934
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Ralstonia sp. AU12-08 RepID=S9RR59_9RALS
Uncharacterized protein {ECO:0000313|EMBL:EPX96166.1}; TaxID=1235457 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. AU12-08.;"
putative endonuclease precursor
putative endonuclease precursor
scnpilot_expt_750_p_scaffold_1474_curated_8
unknown

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7977..8246
DNA (270bp) protein (90aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_1474_curated_9
unknown

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8457..8978
DNA (522bp) protein (174aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_1474_curated_10
Burkholderia sp. SJ98, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8982..9194
DNA (213bp) protein (71aa)
Carbamoylphosphate synthase large subunit n=1 Tax=Burkholderia sp. SJ98 RepID=K8RMX2_9BURK
Carbamoylphosphate synthase large subunit {ECO:0000313|EMBL:EKS72553.1}; TaxID=406819 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. SJ98.;"
hypothetical protein
hypothetical protein
scnpilot_expt_750_p_scaffold_1474_curated_11
unknown

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9202..9408
DNA (207bp) protein (69aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_1474_curated_12
unknown

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9810..10469
DNA (660bp) protein (220aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_1474_curated_13
Thauera phenylacetica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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10478..11266
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Thauera phenylacetica B4P RepID=N6YY10_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:ENO99171.1}; TaxID=1234382 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera phenylacetica B4P.;"
PRTRC system protein B
PRTRC system protein B
scnpilot_expt_750_p_scaffold_1474_curated_14

Not on your lists

11263..11892
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QW91_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBI11514.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
hypothetical protein
scnpilot_expt_750_p_scaffold_1474_curated_15
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11897..12745
DNA (849bp) protein (283aa)
UBA/THIF-type NAD/FAD binding protein n=2 Tax=Ralstonia RepID=B2UDC8_RALPJ
UBA/THIF-type NAD/FAD binding protein
UBA/THIF-type NAD/FAD binding protein
UBA/THIF-type NAD/FAD binding protein
scnpilot_expt_750_p_scaffold_1474_curated_16
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13157..14362
DNA (1206bp) protein (402aa)
Partitioning protein, parA n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5NW97_AROAE
parA; partitioning protein, parA
parA; partitioning protein, parA
parA; partitioning protein, parA
scnpilot_expt_750_p_scaffold_1474_curated_17
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14364..15455
DNA (1092bp) protein (364aa)
ParB, partition protein n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5NW98_AROAE
parB; ParB, partition protein; K03497 chromosome partitioning protein, ParB family
parB; ParB, partition protein; K03497 chromosome partitioning protein, ParB family
parB; ParB, partition protein; K03497 chromosome partitioning protein, ParB family
scnpilot_expt_750_p_scaffold_1474_curated_18
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16600..17019
DNA (420bp) protein (140aa)
Putative replication protein n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5NW99_AROAE
repA; putative replication protein
repA; putative replication protein
repA; putative replication protein
scnpilot_expt_750_p_scaffold_1474_curated_19
unknown

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17774..18709
DNA (936bp) protein (312aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_1474_curated_20
CG_Alphaprot_01, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18783..19277
DNA (495bp) protein (165aa)
Putative nucleoside 2-deoxyribosyltransferase n=1 Tax=Pseudomonas denitrificans ATCC 13867 RepID=M4WQX5_PSEDE
putative nucleoside 2-deoxyribosyltransferase
putative nucleoside 2-deoxyribosyltransferase
putative nucleoside 2-deoxyribosyltransferase
scnpilot_expt_750_p_scaffold_1474_curated_21
unknown

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19294..19572
DNA (279bp) protein (93aa)

This feature has no annotations

Displaying 21 items

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