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scnpilot_expt_750_p_scaffold_3075_curated

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_p_scaffold_3075_curated_1
Candidatus Accumulibacter sp. SK-11, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2..382)
DNA (381bp) protein (127aa)
Transcriptional regulator, LysR family n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RNY9_ACCPU
Na(+)/H(+) antiporter regulatory protein {ECO:0000313|EMBL:EXI72118.1}; TaxID=1454000 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-11.;"
LysR family transcriptional regulator; K03717 LysR family transcriptional regulator, transcriptional activator of nhaA
LysR family transcriptional regulator; K03717 LysR family transcriptional regulator, transcriptional activator of nhaA
scnpilot_expt_750_p_scaffold_3075_curated_2
unknown

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485..805
DNA (321bp) protein (107aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_3075_curated_3

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795..1724
DNA (930bp) protein (310aa)
Uncharacterized protein (Fragment) n=1 Tax=mine drainage metagenome RepID=T0YGH5_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD32183.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
hypothetical protein
scnpilot_expt_750_p_scaffold_3075_curated_4
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1736..2683
DNA (948bp) protein (316aa)
Putative uncharacterized protein id=1261977 bin=GWE1_Burkholderiales_65_30 species=Tolumonas auensis genus=Tolumonas taxon_order=Aeromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
hypothetical protein; K07086
hypothetical protein; K07086
hypothetical protein; K07086
scnpilot_expt_750_p_scaffold_3075_curated_5
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2680..2991
DNA (312bp) protein (104aa)
hypothetical protein id=5079419 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Aeromonas taxon_order=Aeromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein
hypothetical protein
hypothetical protein
scnpilot_expt_750_p_scaffold_3075_curated_6
Acidithiobacillus sp. GGI-221, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

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3044..3715
DNA (672bp) protein (224aa)
bioD-1; dethiobiotin synthetase (EC:6.3.3.3); K01935 dethiobiotin synthetase [EC:6.3.3.3]
bioD-1; dethiobiotin synthetase (EC:6.3.3.3); K01935 dethiobiotin synthetase [EC:6.3.3.3]
bioD-1; dethiobiotin synthetase (EC:6.3.3.3); K01935 dethiobiotin synthetase [EC:6.3.3.3]
bioD-1; dethiobiotin synthetase (EC:6.3.3.3); K01935 dethiobiotin synthetase [EC:6.3.3.3]
scnpilot_expt_750_p_scaffold_3075_curated_7
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3778..4674)
DNA (897bp) protein (299aa)
Putative Universal stress protein id=3859515 bin=GWA2_Methylomirabilis_73_35 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
universal stress protein
universal stress protein
universal stress protein
scnpilot_expt_750_p_scaffold_3075_curated_8
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4721..5143)
DNA (423bp) protein (141aa)
Uncharacterized protein {ECO:0000313|EMBL:BAO29360.1}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;"
scnpilot_expt_750_p_scaffold_3075_curated_9
Candidatus Accumulibacter sp. BA-94, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5291..5914)
DNA (624bp) protein (208aa)
CBS domain containing membrane protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RQ79_ACCPU
Putative manganese-dependent inorganic pyrophosphatase {ECO:0000313|EMBL:EXI89861.1}; TaxID=1454005 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-94.;"
CBS domain containing membrane protein
CBS domain containing membrane protein
scnpilot_expt_750_p_scaffold_3075_curated_10
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5931..6815)
DNA (885bp) protein (295aa)
Universal stress protein family n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1KAA9_AZOSB
uspA; universal stress protein
uspA; universal stress protein
uspA; universal stress protein
scnpilot_expt_750_p_scaffold_3075_curated_11
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6870..8516)
DNA (1647bp) protein (549aa)
Histidine kinase, HAMP region: chemotaxis sensory transducer n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AB04_9PROT
histidine kinase, HAMP region: chemotaxis sensory transducer
histidine kinase, HAMP region: chemotaxis sensory transducer
histidine kinase, HAMP region: chemotaxis sensory transducer
scnpilot_expt_750_p_scaffold_3075_curated_12
Aquitalea magnusonii, Aquitalea, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8527..9204)
DNA (678bp) protein (226aa)
Diguanylate cyclase/phosphodiesterase with PAS sensor(S) n=1 Tax=Pseudogulbenkiania sp. (strain NH8B) RepID=G2J1D0_PSEUL
Diguanylate cyclase {ECO:0000313|EMBL:KJV27518.1}; TaxID=332411 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Aquitalea.;" source="Aquitalea magnusonii.;"
PAS sensor-containing diguanylate cyclase/phosphodiesterase
PAS sensor-containing diguanylate cyclase/phosphodiesterase
Displaying 12 items

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