ggKbase | organisms

Consensus taxonomy: Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Metagenomic Context

Auto curated genome
Original version: SCNPILOT_EXPT_750_P_Bacteroidia_45_5.3_partial

Properties

Avg. coverage: 1.00 Longest contig: 28.04 Kbp Bin length: 3.86 Mbp GC content: 44.99 %

Contigs count: 907 Features count: 3853 rRNAs count: 0 tRNAs count: 0

Genome completeness

near complete RP 45 / 55 MC: 1 BSCG 44 / 51 MC: 3 ASCG 13 / 38 MC: 3

Displaying items 601-650 of 907 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
scnpilot_expt_750_p_scaffold_21910_curated Species: Bacteroides sp. HPS0048 (50%)	2	1907 bp	57.05	1.00	87.15
scnpilot_expt_750_p_scaffold_55880_curated Species: Dysgonomonas gadei (100%)	2	1083 bp	47.09	1.00	95.57
scnpilot_expt_750_p_scaffold_8269_curated Species: Dysgonomonas gadei (100%)	2	3812 bp	43.18	1.00	99.87
scnpilot_expt_750_p_scaffold_21945_curated Species: Dysgonomonas mossii (50%)	2	1905 bp	48.24	1.00	91.65
scnpilot_expt_750_p_scaffold_21979_curated Species: Porphyromonas gingivalis (50%)	2	1903 bp	29.22	1.00	100.11
scnpilot_expt_750_p_scaffold_22016_curated Species: Parabacteroides distasonis (50%)	2	1901 bp	38.35	1.00	89.64
scnpilot_expt_750_p_scaffold_8476_curated Species: CG_Paludi_01 (50%)	2	3727 bp	43.41	1.00	98.85
scnpilot_expt_750_p_scaffold_58471_curated Species: Bacteroides ovatus (50%)	2	1053 bp	62.68	1.00	86.61
scnpilot_expt_750_p_scaffold_58728_curated Species: Bacteroides cellulosilyticus CAG:158 (50%)	2	1051 bp	34.35	1.00	69.36
scnpilot_expt_750_p_scaffold_8532_curated Species: Geofilum rubicundum (100%)	2	3710 bp	44.88	1.00	97.68
scnpilot_expt_750_p_scaffold_22428_curated Species: Bacteroides cellulosilyticus (50%)	2	1880 bp	48.72	1.00	96.70
scnpilot_expt_750_p_scaffold_59379_curated Species: R_Acidobacteria_65_29 (50%)	2	1044 bp	43.77	1.00	100.00
scnpilot_expt_750_p_scaffold_22437_curated Species: Parabacteroides sp. HGS0025 (50%)	2	1879 bp	43.11	1.00	92.28
scnpilot_expt_750_p_scaffold_60086_curated Species: Dysgonomonas gadei (100%)	2	1036 bp	45.56	1.00	83.69
scnpilot_expt_750_p_scaffold_22530_curated Species: Dysgonomonas mossii (50%)	2	1875 bp	45.44	1.00	89.60
scnpilot_expt_750_p_scaffold_22740_curated Species: Dysgonomonas gadei (50%)	2	1864 bp	47.37	1.00	87.39
scnpilot_expt_750_p_scaffold_62287_curated Species: Alistipes sp. CAG:831 (50%)	2	1014 bp	42.50	1.00	86.69
scnpilot_expt_750_p_scaffold_62621_curated Species: Dysgonomonas mossii (50%)	2	1011 bp	42.93	1.00	73.89
scnpilot_expt_750_p_scaffold_22846_curated Species: Bacteroides intestinalis CAG:564 (50%)	2	1858 bp	34.55	1.00	99.30
scnpilot_expt_750_p_scaffold_63151_curated Species: Bacteroides thetaiotaomicron (50%)	2	1005 bp	37.41	1.00	86.87
scnpilot_expt_750_p_scaffold_22927_curated Species: Tannerella forsythia (50%)	2	1853 bp	39.72	1.00	75.61
scnpilot_expt_750_p_scaffold_63263_curated Species: Tannerella sp. CAG:51 (50%)	2	1004 bp	35.06	1.00	69.32
scnpilot_expt_750_p_scaffold_23020_curated Species: Dysgonomonas mossii (50%)	2	1848 bp	42.64	1.00	85.71
scnpilot_expt_750_p_scaffold_23751_curated Species: Dysgonomonas gadei (100%)	2	1812 bp	45.81	1.00	78.81
scnpilot_expt_750_p_scaffold_9324_curated Species: Bacteroides ovatus (50%)	2	3459 bp	42.67	1.00	93.15
scnpilot_expt_750_p_scaffold_9375_curated Species: Bacteroides sp. D22 (50%)	2	3444 bp	39.05	1.00	99.65
scnpilot_expt_750_p_scaffold_24378_curated Species: Dysgonomonas gadei (50%)	2	1784 bp	45.18	1.00	73.15
scnpilot_expt_750_p_scaffold_9402_curated Species: Dysgonomonas gadei (50%)	2	3437 bp	46.67	1.00	81.61
scnpilot_expt_750_p_scaffold_24677_curated Species: Dysgonomonas gadei (50%)	2	1770 bp	49.94	1.00	96.44
scnpilot_expt_750_p_scaffold_9525_curated Species: Paludibacter propionicigenes (100%)	2	3401 bp	48.66	1.00	97.65
scnpilot_expt_750_p_scaffold_24720_curated Species: Dysgonomonas gadei (50%)	2	1769 bp	45.00	1.00	80.72
scnpilot_expt_750_p_scaffold_9592_curated Species: Dysgonomonas gadei (50%)	2	3385 bp	42.04	1.00	72.14
scnpilot_expt_750_p_scaffold_24868_curated Species: Dysgonomonas gadei (100%)	2	1761 bp	47.47	1.00	93.36
scnpilot_expt_750_p_scaffold_25250_curated Species: CG_Paludi_01 (50%)	2	1744 bp	40.65	1.00	69.84
scnpilot_expt_750_p_scaffold_9790_curated Species: Paraprevotella xylaniphila (50%)	2	3330 bp	45.86	1.00	89.55
scnpilot_expt_750_p_scaffold_25374_curated Species: Prevotella buccae (50%)	2	1738 bp	47.24	1.00	98.39
scnpilot_expt_750_p_scaffold_25378_curated Species: Dysgonomonas gadei (100%)	2	1738 bp	48.73	1.00	97.70
scnpilot_expt_750_p_scaffold_9877_curated Species: Dysgonomonas mossii (50%)	2	3304 bp	46.85	1.00	99.61
scnpilot_expt_750_p_scaffold_25753_curated Species: Bacteroides sp. HPS0048 (100%)	2	1722 bp	42.45	1.00	98.43
scnpilot_expt_750_p_scaffold_25925_curated Species: Dysgonomonas mossii (50%)	2	1715 bp	43.09	1.00	70.67
scnpilot_expt_750_p_scaffold_26001_curated Species: Bacteroides graminisolvens (50%)	2	1712 bp	38.43	1.00	91.12
scnpilot_expt_750_p_scaffold_26265_curated Species: Dysgonomonas gadei (50%)	2	1701 bp	49.09	1.00	95.59
scnpilot_expt_750_p_scaffold_26583_curated Species: Bacteroides sp. CAG:189 (50%)	2	1690 bp	34.20	1.00	76.86
scnpilot_expt_750_p_scaffold_26815_curated Species: Bacteroides vulgatus (50%)	2	1681 bp	46.34	1.00	95.84
scnpilot_expt_750_p_scaffold_10488_curated Species: Dysgonomonas mossii (50%)	2	3154 bp	40.55	1.00	98.26
scnpilot_expt_750_p_scaffold_10599_curated Species: Bacteroides sp. CAG:189 (50%)	2	3128 bp	41.50	1.00	93.32
scnpilot_expt_750_p_scaffold_27059_curated Species: Parabacteroides sp. HGS0025 (50%)	2	1671 bp	39.74	1.00	88.15
scnpilot_expt_750_p_scaffold_27176_curated Species: Dysgonomonas gadei (100%)	2	1667 bp	46.79	1.00	99.88
scnpilot_expt_750_p_scaffold_27198_curated Species: Flavihumibacter sp. ZG627 (100%)	2	1666 bp	43.94	1.00	72.21
scnpilot_expt_750_p_scaffold_10812_curated Species: Dysgonomonas mossii (50%)	2	3085 bp	45.09	1.00	90.63

Displaying items 601-650 of 907 in total

scnpilot_dereplicated_Bacteroidales_2

scnpilot-dereplicated_Bacteroidales_45_1

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

scnpilot_dereplicated_Bacteroidales_2

scnpilot-dereplicated_Bacteroidales_45_1

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

Processing

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