ggKbase | organisms

Consensus taxonomy: Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Metagenomic Context

Auto curated genome
Original version: SCNPILOT_EXPT_750_P_Bacteroidia_45_5.3_partial

Properties

Avg. coverage: 1.00 Longest contig: 28.04 Kbp Bin length: 3.86 Mbp GC content: 44.99 %

Contigs count: 907 Features count: 3853 rRNAs count: 0 tRNAs count: 0

Genome completeness

near complete RP 45 / 55 MC: 1 BSCG 44 / 51 MC: 3 ASCG 13 / 38 MC: 3

Displaying items 651-700 of 907 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
scnpilot_expt_750_p_scaffold_27511_curated Species: Dysgonomonas gadei (100%)	2	1654 bp	46.67	1.00	95.04
scnpilot_expt_750_p_scaffold_10853_curated Species: GWF2_Bacteroidetes_33_38_curated (50%)	2	3075 bp	47.19	1.00	83.02
scnpilot_expt_750_p_scaffold_27777_curated Species: Dysgonomonas gadei (50%)	2	1644 bp	43.61	1.00	84.49
scnpilot_expt_750_p_scaffold_10964_curated Species: Dysgonomonas gadei (50%)	2	3059 bp	47.70	1.00	100.03
scnpilot_expt_750_p_scaffold_27882_curated Species: Geofilum rubicundum (100%)	2	1640 bp	43.66	1.00	99.15
scnpilot_expt_750_p_scaffold_11050_curated Species: Dysgonomonas gadei (100%)	2	3044 bp	47.27	1.00	93.73
scnpilot_expt_750_p_scaffold_28002_curated Species: Flavihumibacter petaseus (100%)	2	1636 bp	40.71	1.00	98.84
scnpilot_expt_750_p_scaffold_28215_curated Species: Alistipes indistinctus (50%)	2	1628 bp	38.57	1.00	78.32
scnpilot_expt_750_p_scaffold_11119_curated Species: Dysgonomonas gadei (50%)	2	3032 bp	47.20	1.00	90.93
scnpilot_expt_750_p_scaffold_11162_curated Species: Tetranychus urticae (50%)	2	3022 bp	44.37	1.00	61.25
scnpilot_expt_750_p_scaffold_28554_curated Species: Dysgonomonas mossii (50%)	2	1616 bp	33.97	1.00	44.18
scnpilot_expt_750_p_scaffold_28568_curated Species: GWC2_OP9X_49_35_curated (50%)	2	1616 bp	47.96	1.00	82.80
scnpilot_expt_750_p_scaffold_28582_curated Species: R_RIF_OD1_03_48_11 (50%)	2	1615 bp	34.74	1.00	93.25
scnpilot_expt_750_p_scaffold_28747_curated Species: Prevotella sp. BV3P1 (50%)	2	1609 bp	47.11	1.00	99.19
scnpilot_expt_750_p_scaffold_11597_curated Species: Prevotella sp. CAG:1058 (50%)	2	2941 bp	46.41	1.00	90.99
scnpilot_expt_750_p_scaffold_28961_curated Species: Bacteroides sp. HPS0048 (100%)	2	1602 bp	36.89	1.00	99.25
scnpilot_expt_750_p_scaffold_11638_curated Species: Parabacteroides goldsteinii (50%)	2	2933 bp	43.57	1.00	94.51
scnpilot_expt_750_p_scaffold_29391_curated Species: Bacteroides xylanisolvens (50%)	2	1588 bp	43.20	1.00	98.43
scnpilot_expt_750_p_scaffold_29651_curated Species: Odoribacter laneus (50%)	2	1578 bp	42.71	1.00	66.92
scnpilot_expt_750_p_scaffold_11799_curated Species: Dysgonomonas mossii (50%)	2	2907 bp	45.30	1.00	96.90
scnpilot_expt_750_p_scaffold_12065_curated Species: Dysgonomonas gadei (100%)	2	2864 bp	46.30	1.00	96.37
scnpilot_expt_750_p_scaffold_30930_curated Species: Paludibacter propionicigenes (50%)	2	1538 bp	50.00	1.00	96.36
scnpilot_expt_750_p_scaffold_31103_curated Species: Bacteroides sp. D1 (50%)	2	1533 bp	41.94	1.00	99.22
scnpilot_expt_750_p_scaffold_12284_curated Species: Bacteroides sp. D1 (50%)	2	2825 bp	46.55	1.00	97.06
scnpilot_expt_750_p_scaffold_12335_curated Species: Dysgonomonas mossii (100%)	2	2815 bp	48.35	1.00	91.33
scnpilot_expt_750_p_scaffold_31805_curated Species: RLO_Flavobacteria_35_11 (50%)	2	1512 bp	45.30	1.00	103.77
scnpilot_expt_750_p_scaffold_12358_curated Species: Dysgonomonas mossii (50%)	2	2812 bp	42.99	1.00	69.56
scnpilot_expt_750_p_scaffold_31969_curated Species: Dysgonomonas gadei (50%)	2	1508 bp	45.69	1.00	91.31
scnpilot_expt_750_p_scaffold_12467_curated Species: Barnesiella viscericola (50%)	2	2792 bp	47.21	1.00	83.38
scnpilot_expt_750_p_scaffold_32208_curated Species: Barnesiella viscericola (50%)	2	1501 bp	42.97	1.00	79.75
scnpilot_expt_750_p_scaffold_32329_curated Species: Bacteroides pyogenes (50%)	2	1497 bp	48.76	1.00	91.78
scnpilot_expt_750_p_scaffold_32346_curated Species: Dysgonomonas gadei (100%)	2	1497 bp	40.01	1.00	91.78
scnpilot_expt_750_p_scaffold_32528_curated Species: Paludibacter propionicigenes (50%)	2	1492 bp	40.35	1.00	96.51
scnpilot_expt_750_p_scaffold_32712_curated Species: Porphyromonas sp. COT-108 OH1349 (100%)	2	1487 bp	42.43	1.00	68.59
scnpilot_expt_750_p_scaffold_32844_curated Species: Bacteroides sp. CAG:754 (100%)	2	1483 bp	44.50	1.00	100.13
scnpilot_expt_750_p_scaffold_12740_curated Species: Bacteroides finegoldii (100%)	2	2748 bp	45.16	1.00	99.56
scnpilot_expt_750_p_scaffold_33502_curated Species: Bacteroides sp. HPS0048 (50%)	2	1466 bp	43.18	1.00	96.59
scnpilot_expt_750_p_scaffold_12809_curated Species: Dysgonomonas gadei (50%)	2	2735 bp	45.19	1.00	76.89
scnpilot_expt_750_p_scaffold_12818_curated Species: Dysgonomonas gadei (50%)	2	2734 bp	45.32	1.00	81.42
scnpilot_expt_750_p_scaffold_12858_curated Species: Paludibacter propionicigenes (50%)	2	2728 bp	43.62	1.00	74.78
scnpilot_expt_750_p_scaffold_33815_curated Species: Prevotella sp. CAG:255 (50%)	2	1459 bp	32.90	1.00	68.47
scnpilot_expt_750_p_scaffold_12927_curated Species: Bacteroides sp. CAG:633 (50%)	2	2719 bp	49.65	1.00	99.85
scnpilot_expt_750_p_scaffold_33980_curated Species: Dysgonomonas gadei (50%)	2	1454 bp	45.32	1.00	92.23
scnpilot_expt_750_p_scaffold_12964_curated Species: Dysgonomonas mossii (50%)	2	2713 bp	47.55	1.00	98.53
scnpilot_expt_750_p_scaffold_13004_curated Species: Bacteroides vulgatus (50%)	2	2708 bp	43.87	1.00	99.15
scnpilot_expt_750_p_scaffold_13117_curated Species: Parabacteroides sp. HGS0025 (50%)	2	2687 bp	49.13	1.00	85.52
scnpilot_expt_750_p_scaffold_34546_curated Species: Parabacteroides goldsteinii (50%)	2	1440 bp	48.68	1.00	90.21
scnpilot_expt_750_p_scaffold_13184_curated Species: Dysgonomonas mossii (50%)	2	2678 bp	47.83	1.00	87.49
scnpilot_expt_750_p_scaffold_13324_curated Species: Parabacteroides goldsteinii (100%)	2	2655 bp	41.47	1.00	94.69
scnpilot_expt_750_p_scaffold_35226_curated Species: Paludibacter propionicigenes (50%)	2	1423 bp	50.25	1.00	92.13

Displaying items 651-700 of 907 in total

scnpilot_dereplicated_Bacteroidales_2

scnpilot-dereplicated_Bacteroidales_45_1

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

scnpilot_dereplicated_Bacteroidales_2

scnpilot-dereplicated_Bacteroidales_45_1

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

Processing

Terms of Service

Search Help