ggKbase | organisms

Consensus taxonomy: Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Metagenomic Context

Auto curated genome
Original version: SCNPILOT_EXPT_750_P_Bacteroidia_45_5.3_partial

Properties

Avg. coverage: 1.00 Longest contig: 28.04 Kbp Bin length: 3.86 Mbp GC content: 44.99 %

Contigs count: 907 Features count: 3853 rRNAs count: 0 tRNAs count: 0

Genome completeness

near complete RP 45 / 55 MC: 1 BSCG 44 / 51 MC: 3 ASCG 13 / 38 MC: 3

Displaying items 701-750 of 907 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
scnpilot_expt_750_p_scaffold_13351_curated Species: Porphyromonadaceae bacterium ING2-E5B (50%)	2	2653 bp	46.40	1.00	90.46
scnpilot_expt_750_p_scaffold_5498_curated Species: GWE2_Bacteroidetes_40_63_curated (50%)	2	5408 bp	45.32	1.00	95.36
scnpilot_expt_750_p_scaffold_13413_curated Species: Parabacteroides goldsteinii (50%)	2	2646 bp	40.55	1.00	85.37
scnpilot_expt_750_p_scaffold_35405_curated Species: Dysgonomonas gadei (100%)	2	1418 bp	41.61	1.00	98.80
scnpilot_expt_750_p_scaffold_35533_curated Species: Dysgonomonas gadei (50%)	2	1415 bp	44.81	1.00	91.59
scnpilot_expt_750_p_scaffold_35664_curated Species: Parabacteroides goldsteinii (50%)	2	1412 bp	38.81	1.00	92.85
scnpilot_expt_750_p_scaffold_5573_curated Species: Bacteroides sp. CAG:633 (100%)	2	5329 bp	44.34	1.00	88.67
scnpilot_expt_750_p_scaffold_13731_curated Species: Dysgonomonas gadei (50%)	2	2600 bp	49.15	1.00	96.69
scnpilot_expt_750_p_scaffold_36045_curated Species: Parabacteroides gordonii (50%)	2	1403 bp	44.83	1.00	78.90
scnpilot_expt_750_p_scaffold_13933_curated Species: Bacteroides sp. HPS0048 (100%)	2	2576 bp	50.62	1.00	99.34
scnpilot_expt_750_p_scaffold_13966_curated Species: Parabacteroides goldsteinii (50%)	2	2571 bp	45.66	1.00	95.33
scnpilot_expt_750_p_scaffold_36385_curated Species: Dysgonomonas gadei (50%)	2	1395 bp	39.35	1.00	41.29
scnpilot_expt_750_p_scaffold_36603_curated Species: Bacteroides nordii (50%)	2	1391 bp	47.23	1.00	93.17
scnpilot_expt_750_p_scaffold_14080_curated Species: Dysgonomonas mossii (50%)	2	2557 bp	46.34	1.00	72.51
scnpilot_expt_750_p_scaffold_36799_curated Species: Verrucomicrobia bacterium IMCC26134 (50%)	2	1386 bp	67.89	1.00	100.22
scnpilot_expt_750_p_scaffold_14099_curated Species: Bacteroides sp. D2 (50%)	2	2554 bp	45.34	1.00	89.27
scnpilot_expt_750_p_scaffold_36845_curated Species: Dysgonomonas gadei (50%)	2	1385 bp	46.86	1.00	95.74
scnpilot_expt_750_p_scaffold_37186_curated Species: Dysgonomonas gadei (50%)	2	1377 bp	44.01	1.00	58.82
scnpilot_expt_750_p_scaffold_14330_curated Species: Dysgonomonas mossii (50%)	2	2525 bp	47.29	1.00	90.65
scnpilot_expt_750_p_scaffold_37236_curated Species: Dysgonomonas mossii (100%)	2	1376 bp	47.09	1.00	96.37
scnpilot_expt_750_p_scaffold_37257_curated Species: Pedobacter glucosidilyticus (50%)	2	1376 bp	36.41	1.00	93.10
scnpilot_expt_750_p_scaffold_14369_curated Species: Paludibacter propionicigenes (100%)	2	2520 bp	49.56	1.00	95.24
scnpilot_expt_750_p_scaffold_37378_curated Species: Tannerella forsythia (50%)	2	1373 bp	45.23	1.00	99.20
scnpilot_expt_750_p_scaffold_14547_curated Species: Flavobacterium subsaxonicum (50%)	2	2500 bp	42.36	1.00	98.52
scnpilot_expt_750_p_scaffold_37466_curated Species: Dysgonomonas gadei (50%)	2	1371 bp	45.81	1.00	64.55
scnpilot_expt_750_p_scaffold_37994_curated Species: Bacteroides sp. CAG:20 (50%)	2	1359 bp	40.54	1.00	94.26
scnpilot_expt_750_p_scaffold_38062_curated Species: Prevotella sp. BV3P1 (50%)	2	1358 bp	43.45	1.00	99.41
scnpilot_expt_750_p_scaffold_38182_curated Species: Dysgonomonas gadei (50%)	2	1355 bp	44.21	1.00	68.86
scnpilot_expt_750_p_scaffold_14744_curated Species: Prevotella sp. CAG:474 (50%)	2	2477 bp	45.62	1.00	99.56
scnpilot_expt_750_p_scaffold_38205_curated Species: CG_Flavo_01 (50%)	2	1355 bp	38.08	1.00	98.97
scnpilot_expt_750_p_scaffold_38223_curated Species: Bacteroides sp. CAG:875 (50%)	2	1355 bp	31.66	1.00	87.90
scnpilot_expt_750_p_scaffold_38591_curated Species: Dysgonomonas mossii (50%)	2	1348 bp	46.81	1.00	94.58
scnpilot_expt_750_p_scaffold_14889_curated Species: Dysgonomonas mossii (100%)	2	2461 bp	37.10	1.00	78.02
scnpilot_expt_750_p_scaffold_38759_curated Species: Chlamydia sp. 'Rubis' (50%)	2	1344 bp	31.47	1.00	89.51
scnpilot_expt_750_p_scaffold_14979_curated Species: Bacteroides finegoldii (50%)	2	2451 bp	45.04	1.00	76.38
scnpilot_expt_750_p_scaffold_14984_curated Species: Dysgonomonas mossii (100%)	2	2451 bp	54.47	1.00	94.00
scnpilot_expt_750_p_scaffold_39195_curated Species: Bacteroides graminisolvens (50%)	2	1335 bp	48.31	1.00	95.51
scnpilot_expt_750_p_scaffold_39713_curated Species: Dysgonomonas mossii (50%)	2	1325 bp	49.21	1.00	98.49
scnpilot_expt_750_p_scaffold_15295_curated Species: Dysgonomonas mossii (100%)	2	2417 bp	46.71	1.00	90.61
scnpilot_expt_750_p_scaffold_39976_curated Species: Bacteroides sp. 2_1_16 (50%)	2	1320 bp	49.09	1.00	100.23
scnpilot_expt_750_p_scaffold_40092_curated Species: Dysgonomonas gadei (50%)	2	1317 bp	50.27	1.00	114.12
scnpilot_expt_750_p_scaffold_15449_curated Species: Bacteroides graminisolvens (50%)	2	2399 bp	52.02	1.00	83.91
scnpilot_expt_750_p_scaffold_40342_curated Species: Parabacteroides gordonii (50%)	2	1313 bp	41.36	1.00	93.68
scnpilot_expt_750_p_scaffold_15740_curated Species: Geofilum rubicundum (50%)	2	2372 bp	47.60	1.00	94.22
scnpilot_expt_750_p_scaffold_41148_curated Species: Barnesiella intestinihominis (50%)	2	1297 bp	45.80	1.00	69.39
scnpilot_expt_750_p_scaffold_15949_curated Species: Dysgonomonas mossii (100%)	2	2353 bp	49.30	1.00	96.01
scnpilot_expt_750_p_scaffold_41407_curated Species: Flavihumibacter solisilvae (50%)	2	1292 bp	40.87	1.00	63.16
scnpilot_expt_750_p_scaffold_41626_curated	2	1288 bp	39.13	1.00	33.54
scnpilot_expt_750_p_scaffold_41669_curated Species: Bacteroides coprocola (50%)	2	1288 bp	32.92	1.00	82.69
scnpilot_expt_750_p_scaffold_41785_curated Species: Dysgonomonas mossii (50%)	2	1286 bp	49.07	1.00	98.91

Displaying items 701-750 of 907 in total

scnpilot_dereplicated_Bacteroidales_2

scnpilot-dereplicated_Bacteroidales_45_1

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

scnpilot_dereplicated_Bacteroidales_2

scnpilot-dereplicated_Bacteroidales_45_1

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

Processing

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