ggKbase home page

scnpilot_expt_750_p_scaffold_937_curated

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_p_scaffold_937_curated_1
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

583..1461
DNA (879bp) protein (293aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IU00_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGJ99133.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
transcriptional regulator
scnpilot_expt_750_p_scaffold_937_curated_2
Bacteroides massiliensis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1594..2478
DNA (885bp) protein (295aa)
integrase n=1 Tax=Butyricimonas synergistica RepID=UPI0003687642
Uncharacterized protein {ECO:0000313|EMBL:EOS15180.1}; TaxID=1235788 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides massiliensis dnLKV3.;"
integrase
scnpilot_expt_750_p_scaffold_937_curated_3
Bacteroides sp. D2, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2711..3523
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. D2 RepID=E5CI30_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFS34403.1}; TaxID=556259 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D2.;"
transcriptional regulator
scnpilot_expt_750_p_scaffold_937_curated_4
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3674..4741
DNA (1068bp) protein (356aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IZE8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK01273.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator
scnpilot_expt_750_p_scaffold_937_curated_5
unknown

Not on your lists

4738..4830
DNA (93bp) protein (31aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_937_curated_6
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4827..6065
DNA (1239bp) protein (413aa)
L-fucose:H+ symporter permease n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IZE9_9PORP
L-fucose:H+ symporter permease {ECO:0000313|EMBL:EGK01274.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
fucose permease; K02429 MFS transporter, FHS family, L-fucose permease
scnpilot_expt_750_p_scaffold_937_curated_7
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6109..7269
DNA (1161bp) protein (387aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IZF0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK01275.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_937_curated_8
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7496..10591
DNA (3096bp) protein (1032aa)
SusC homolog n=2 Tax=Bacteroides thetaiotaomicron RepID=Q8A3R0_BACTN
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EOR99414.1}; TaxID=1235785 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron dnLKV9.;"
hypothetical protein rbh
scnpilot_expt_750_p_scaffold_937_curated_9
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10604..12466
DNA (1863bp) protein (621aa)
RagB/SusD domain protein n=2 Tax=root RepID=R6VPH8_9BACT
RagB/SusD domain protein {ECO:0000313|EMBL:CDC98945.1}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
RagB/SusD domain-containing protein
scnpilot_expt_750_p_scaffold_937_curated_10
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12551..15109
DNA (2559bp) protein (853aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IZF1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK01276.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
hypothetical protein rbh
scnpilot_expt_750_p_scaffold_937_curated_11
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15114..16364
DNA (1251bp) protein (417aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IZF2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK01277.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_937_curated_12
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16422..18515
DNA (2094bp) protein (698aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IZF3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK01278.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_937_curated_13
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18540..20483
DNA (1944bp) protein (648aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IZF4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK01279.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
Protein of unknown function (DUF2961)
scnpilot_expt_750_p_scaffold_937_curated_14
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20518..22293
DNA (1776bp) protein (592aa)
L-fucose isomerase {ECO:0000256|HAMAP-Rule:MF_01254, ECO:0000256|SAAS:SAAS00040911}; Short=FucIase {ECO:0000256|HAMAP-Rule:MF_01254};; EC=5.3.1.25 {ECO:0000256|HAMAP-Rule:MF_01254, ECO:0000256|SAAS:SAAS00040955};; 6-deoxy-L-galactose isomerase {ECO:0000256|HAMAP-Rule:MF_01254}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
L-fucose isomerase; K01818 L-fucose isomerase [EC:5.3.1.25]
L-fucose isomerase n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IWX5_9PORP
scnpilot_expt_750_p_scaffold_937_curated_15
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22381..23307
DNA (927bp) protein (309aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IZG1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK01286.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
scnpilot_expt_750_p_scaffold_937_curated_16
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23420..24688
DNA (1269bp) protein (423aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IZG2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK01287.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_937_curated_17
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24719..25876
DNA (1158bp) protein (386aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IZG3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK01288.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
carbohydrate-binding protein
scnpilot_expt_750_p_scaffold_937_curated_18
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25906..27051
DNA (1146bp) protein (382aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IZG4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK01289.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_937_curated_19
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27087..28769
DNA (1683bp) protein (561aa)
Ribulokinase {ECO:0000256|RuleBase:RU003455, ECO:0000256|SAAS:SAAS00183333}; EC=2.7.1.16 {ECO:0000256|RuleBase:RU003455, ECO:0000256|SAAS:SAAS00183333};; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
L-ribulokinase (EC:2.7.1.16); K00853 L-ribulokinase [EC:2.7.1.16]
Ribulokinase n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IZG5_9PORP
scnpilot_expt_750_p_scaffold_937_curated_20
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28826..30124)
DNA (1299bp) protein (433aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000370B67A
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
scnpilot_expt_750_p_scaffold_937_curated_21
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30121..30699)
DNA (579bp) protein (193aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003813C81
Sigma-70 region 2 {ECO:0000313|EMBL:CEA15650.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
sigma-W factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
scnpilot_expt_750_p_scaffold_937_curated_22
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30808..31476)
DNA (669bp) protein (223aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K6ADK7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EOS04056.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_937_curated_23
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31708..33048
DNA (1341bp) protein (447aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8WWJ6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK06330.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
DEAD/DEAH box helicase
scnpilot_expt_750_p_scaffold_937_curated_24
unknown

Not on your lists

comp(33065..33181)
DNA (117bp) protein (39aa)

This feature has no annotations

Displaying 24 items

View Taxonomy