ggKbase home page

scnpilot_expt_750_p_scaffold_396_curated

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_p_scaffold_396_curated_1
Candidatus Scalindua brodae, Candidatus Scalindua, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(2838..3497)
DNA (660bp) protein (220aa)
hydrolase n=2 Tax=Bacteroides RepID=UPI00015AB277
Cell wall-associated hydrolase {ECO:0000313|EMBL:KHE90546.1}; TaxID=237368 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Scalindua.;" source="Candidatus Scalindua brodae.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_396_curated_2
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4170..5708
DNA (1539bp) protein (513aa)
Putative uncharacterized protein n=2 Tax=Dysgonomonas RepID=F8X2R6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK05784.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
beta-xylosidase rbh
scnpilot_expt_750_p_scaffold_396_curated_3
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5763..7370)
DNA (1608bp) protein (536aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X2R5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK05783.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_396_curated_4
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7596..9050)
DNA (1455bp) protein (485aa)
Putative uncharacterized protein n=2 Tax=Dysgonomonas RepID=F8X2R4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK05782.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
Icc family phosphohydrolase
scnpilot_expt_750_p_scaffold_396_curated_5
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9174..11138)
DNA (1965bp) protein (655aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X2R3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK05781.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
alkaline phosphatase
scnpilot_expt_750_p_scaffold_396_curated_6
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11207..12061)
DNA (855bp) protein (285aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X2R2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK05780.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
putative endonuclease/exonuclease/phosphatase family protein; K06896
scnpilot_expt_750_p_scaffold_396_curated_7
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12076..15003)
DNA (2928bp) protein (976aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X2R1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK05779.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
alpha-1,2-mannosidase
scnpilot_expt_750_p_scaffold_396_curated_8
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15119..16654)
DNA (1536bp) protein (512aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X2R0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK05778.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
RagB/SusD domain-containing protein
scnpilot_expt_750_p_scaffold_396_curated_9
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16667..20053)
DNA (3387bp) protein (1129aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X2Q9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK05777.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_396_curated_10
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20275..21258)
DNA (984bp) protein (328aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X2Q8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK05776.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
anti-sigma factor
scnpilot_expt_750_p_scaffold_396_curated_11
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21321..21899)
DNA (579bp) protein (193aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X2H7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK05775.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily
scnpilot_expt_750_p_scaffold_396_curated_12
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22091..23479
DNA (1389bp) protein (463aa)
Glycosyl hydrolase family 109 protein 1 n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X2H6_9PORP
Glycosyl hydrolase family 109 protein 1 {ECO:0000313|EMBL:EGK05774.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
oxidoreductase rbh
scnpilot_expt_750_p_scaffold_396_curated_13
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23625..25622
DNA (1998bp) protein (666aa)
glycoside hydrolase; K01187 alpha-glucosidase [EC:3.2.1.20]
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X2H5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK05773.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
scnpilot_expt_750_p_scaffold_396_curated_14
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25713..27008)
DNA (1296bp) protein (432aa)
O-acetylhomoserine sulfhydrolase (EC:2.5.1.47 2.5.1.49); K01740 O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X2H4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK05772.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
scnpilot_expt_750_p_scaffold_396_curated_15
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27101..28048)
DNA (948bp) protein (316aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
cysK; putative cysteine synthase; K01738 cysteine synthase A [EC:2.5.1.47]
Cysteine synthase A n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X2H3_9PORP
scnpilot_expt_750_p_scaffold_396_curated_16
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28317..29606
DNA (1290bp) protein (430aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alani ne ligase (EC:6.3.2.10)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X2H2_9PORP
scnpilot_expt_750_p_scaffold_396_curated_17
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29706..32201)
DNA (2496bp) protein (832aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X2H1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK05769.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
DNA-binding transcriptional activator
scnpilot_expt_750_p_scaffold_396_curated_18
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32610..34445
DNA (1836bp) protein (612aa)
Putative uncharacterized protein n=2 Tax=Dysgonomonas RepID=F8X2H0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK05768.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_396_curated_19
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34546..36012
DNA (1467bp) protein (489aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X2G9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK05767.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
glycosyl hydrolase
scnpilot_expt_750_p_scaffold_396_curated_20
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36034..39213
DNA (3180bp) protein (1060aa)
Putative uncharacterized protein n=2 Tax=Dysgonomonas RepID=F8X2G8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK05766.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
TonB-dependent Receptor Plug Domain./TonB dependent receptor.
scnpilot_expt_750_p_scaffold_396_curated_21
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39252..41306
DNA (2055bp) protein (685aa)
Putative uncharacterized protein n=2 Tax=Dysgonomonas RepID=F8X2G7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK05765.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
SusD family.
scnpilot_expt_750_p_scaffold_396_curated_22
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

41330..42148
DNA (819bp) protein (273aa)
Putative uncharacterized protein n=2 Tax=Dysgonomonas RepID=F8X2G6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK05764.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_396_curated_23
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

42390..44564
DNA (2175bp) protein (725aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X2G5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK05763.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_396_curated_24
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

44593..47088
DNA (2496bp) protein (832aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X2G4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK05762.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
glutaminase rbh
scnpilot_expt_750_p_scaffold_396_curated_25
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

47474..48766
DNA (1293bp) protein (431aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02006}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
tyrosyl-tRNA synthetase 1; K01866 tyrosyl-tRNA synthetase [EC:6.1.1.1]
Tyrosine--tRNA ligase n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X2G3_9PORP
scnpilot_expt_750_p_scaffold_396_curated_26
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(48973..50409)
DNA (1437bp) protein (479aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X2G2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK05760.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
Nitrate/nitrite transporter
scnpilot_expt_750_p_scaffold_396_curated_27
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(50419..51093)
DNA (675bp) protein (225aa)
keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase (EC:4.1.2.14 4.1.3.16); K01625 2-dehydro-3-deoxyphosphogluconate aldolase / 4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.16]
Putative uncharacterized protein n=2 Tax=Dysgonomonas RepID=F8X2G1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK05759.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
scnpilot_expt_750_p_scaffold_396_curated_28
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(51256..52293)
DNA (1038bp) protein (346aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X2G0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK05758.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
sugar kinase
scnpilot_expt_750_p_scaffold_396_curated_29
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(52322..53476)
DNA (1155bp) protein (385aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X2F9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK05757.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
putative lipoprotein
scnpilot_expt_750_p_scaffold_396_curated_30
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(53586..54992)
DNA (1407bp) protein (469aa)
Uronate isomerase {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013440}; EC=5.3.1.12 {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013438};; Glucuronate isomerase {ECO:0000256|HAMAP-Rule:MF_00675}; Uronic isomerase {ECO:0000256|HAMAP-Rule:MF_00675}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
d-glucuronate isomerase (EC:5.3.1.12); K01812 glucuronate isomerase [EC:5.3.1.12]
Uronate isomerase n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X2F8_9PORP
Displaying items 1-30 of 44 in total

View Taxonomy