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scnpilot_expt_750_p_scaffold_983_curated

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_p_scaffold_983_curated_1
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(339..1715)
DNA (1377bp) protein (459aa)
Magnesium transporter n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2HVM0_9SPHI
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ML3W.;"
magnesium transporter; K06213 magnesium transporter
scnpilot_expt_750_p_scaffold_983_curated_2
unknown

Not on your lists

1865..2071
DNA (207bp) protein (69aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_983_curated_3
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2362..5211
DNA (2850bp) protein (950aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VKS4_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:CDS93085.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_983_curated_4
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5223..6092)
DNA (870bp) protein (290aa)
Endonuclease/exonuclease/phosphatase family protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FYX3_9SPHI
Endonuclease/exonuclease/phosphatase family protein {ECO:0000313|EMBL:EEI91815.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_983_curated_5
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6257..7447)
DNA (1191bp) protein (397aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ML3W.;"
phosphoglycerate kinase; K00927 phosphoglycerate kinase [EC:2.7.2.3]
Phosphoglycerate kinase n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0MYK4_9SPHI
scnpilot_expt_750_p_scaffold_983_curated_6
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7664..9430)
DNA (1767bp) protein (589aa)
signal peptide peptidase SppA, 67K type; K04773 protease IV [EC:3.4.21.-]
Signal peptide peptidase SppA, 67K type n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VKS6_9SPHI
Protease IV {ECO:0000313|EMBL:AIM36225.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ML3W.;"
scnpilot_expt_750_p_scaffold_983_curated_7
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9671..10174
DNA (504bp) protein (168aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; K00950 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
Uncharacterized protein n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0MUC3_9SPHI
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase {ECO:0000313|EMBL:AIM36224.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ML3W.;"
scnpilot_expt_750_p_scaffold_983_curated_8
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10155..10499
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0MUC3_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:CDS93073.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_983_curated_9
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10496..11182)
DNA (687bp) protein (229aa)
CDP-alcohol phosphatidyltransferase; K00998 phosphatidylserine synthase [EC:2.7.8.8]
Putative CDP-diacylglycerol-serine O-phosphatidyltransferase n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2G5L0_9SPHI
CDP-diacylglycerol--serine O-phosphatidyltransferase CDP-diglycerine-serine O-phosphatidyltransferase. phosphatidylserine synthase {ECO:0000313|EMBL:CDS93071.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
scnpilot_expt_750_p_scaffold_983_curated_10
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11257..12756)
DNA (1500bp) protein (500aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
Transcription termination factor Rho n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0NZA3_9SPHI
transcription termination factor Rho; K03628 transcription termination factor Rho
scnpilot_expt_750_p_scaffold_983_curated_11
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13060..14787
DNA (1728bp) protein (576aa)
Glucose/galactose transporter family protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2G5L2_9SPHI
Glucose transporter {ECO:0000313|EMBL:AIM36220.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ML3W.;"
sugar-transporting permease; K02429 MFS transporter, FHS family, L-fucose permease
scnpilot_expt_750_p_scaffold_983_curated_12
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15028..15891
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2G5L3_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:CDT24219.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
N-acetylglucosamine kinase
scnpilot_expt_750_p_scaffold_983_curated_13
unknown

Not on your lists

16189..16290
DNA (102bp) protein (34aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_983_curated_14
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16310..17128
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0MYK8_9SPHI
Phosphoesterase {ECO:0000313|EMBL:AIM36218.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ML3W.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_983_curated_15
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17222..17905)
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0MUC7_9SPHI
Hydrolase {ECO:0000313|EMBL:AIM36217.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ML3W.;"
beta-lactamase
scnpilot_expt_750_p_scaffold_983_curated_16
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17916..18230)
DNA (315bp) protein (105aa)
Nucleoid-associated protein HMPREF0766_11603 n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VKT4_9SPHI
Nucleoid-associated protein HMPREF0766_11603 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
hypothetical protein; K09747 hypothetical protein
scnpilot_expt_750_p_scaffold_983_curated_17
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18416..19042
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0NZA5_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AIM36215.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ML3W.;"
scnpilot_expt_750_p_scaffold_983_curated_18
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19113..20180)
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0MJM1_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AIM36214.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ML3W.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_983_curated_19
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20414..20995
DNA (582bp) protein (194aa)
Thymidine kinase {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544}; EC=2.7.1.21 {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544};; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ML3W.;"
thymidine kinase; K00857 thymidine kinase [EC:2.7.1.21]
Thymidine kinase n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0MYL3_9SPHI
scnpilot_expt_750_p_scaffold_983_curated_20
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21248..23971)
DNA (2724bp) protein (908aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0MUD1_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AIM36206.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ML3W.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_983_curated_21
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24099..25562)
DNA (1464bp) protein (488aa)
Cardiolipin synthase {ECO:0000313|EMBL:CDS92887.1}; EC=2.7.8.- {ECO:0000313|EMBL:CDS92887.1};; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
phospholipase D; K06131 cardiolipin synthase [EC:2.7.8.-]
Uncharacterized protein n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0P5H4_9SPHI
scnpilot_expt_750_p_scaffold_983_curated_22
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25620..26309)
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2G5M9_9SPHI
Membrane protein {ECO:0000313|EMBL:CDS92881.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
hypothetical protein; K09792 hypothetical protein
scnpilot_expt_750_p_scaffold_983_curated_23
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26314..26736)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0MZR4_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:CDS92880.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
nitrogen fixation protein FixH
scnpilot_expt_750_p_scaffold_983_curated_24
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26748..28136)
DNA (1389bp) protein (463aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0MKQ4_9SPHI
Iron-sulfur protein {ECO:0000313|EMBL:CDS92879.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
cytochrome C oxidase accessory protein CcoG
scnpilot_expt_750_p_scaffold_983_curated_25
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28152..29066)
DNA (915bp) protein (305aa)
Cb-type cytochrome c oxidase subunit III {ECO:0000313|EMBL:CDS92878.1}; EC=1.9.3.1 {ECO:0000313|EMBL:CDS92878.1};; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
Uncharacterized protein n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0P0E7_9SPHI
cytochrome C class I; K00406 cytochrome c oxidase cbb3-type subunit III
scnpilot_expt_750_p_scaffold_983_curated_26
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(29070..29291)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0P6M9_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:CDS92877.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_983_curated_27
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(29272..31410)
DNA (2139bp) protein (713aa)
Cb-type cytochrome c oxidase subunit I {ECO:0000313|EMBL:CDS92876.1}; EC=1.9.3.1 {ECO:0000313|EMBL:CDS92876.1};; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
cytochrome C oxidase cbb3-type subunit I; K15862 cytochrome c oxidase cbb3-type subunit I/II [EC:1.9.3.1]
Cytochrome c oxidase, cbb3-type, subunit I n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2G5N4_9SPHI
Displaying 27 items

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