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scnpilot_expt_750_p_scaffold_847_curated

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_p_scaffold_847_curated_1
Elizabethkingia anophelis, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

61..1206
DNA (1146bp) protein (382aa)
transposase n=1 Tax=Cytophagales str. B6 RepID=UPI0003B48036
Mobile element protein {ECO:0000313|EMBL:AIL45240.1}; TaxID=1338011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia anophelis NUHP1.;"
putative transposase
scnpilot_expt_750_p_scaffold_847_curated_2
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1288..2271)
DNA (984bp) protein (328aa)
glyceraldehyde 3-phosphate dehydrogenase; K00134 glyceraldehyde 3-phosphate dehydrogenase [EC:1.2.1.12]
Glyceraldehyde 3-phosphate dehydrogenase n=1 Tax=Maribacter sp. (strain HTCC2170 / KCCM 42371) RepID=A4AWV8_MARSH
Uncharacterized protein {ECO:0000313|EMBL:ETZ20975.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
scnpilot_expt_750_p_scaffold_847_curated_3
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2517..3296)
DNA (780bp) protein (260aa)
AraC family transcriptional regulator n=1 Tax=Myroides injenensis RepID=UPI000288DEE4
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ADZ77460.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
scnpilot_expt_750_p_scaffold_847_curated_4
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3388..3639
DNA (252bp) protein (84aa)
hypothetical protein n=1 Tax=Myroides injenensis RepID=UPI0002885BB5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ77461.1}; Flags: Precursor;; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
scnpilot_expt_750_p_scaffold_847_curated_5
Chryseobacterium sp. StRB126, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3626..4960
DNA (1335bp) protein (445aa)
transporter n=1 Tax=Myroides injenensis RepID=UPI000288517B
Outer membrane efflux protein {ECO:0000313|EMBL:BAP31334.1}; TaxID=878220 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. StRB126.;"
outer membrane efflux protein
scnpilot_expt_750_p_scaffold_847_curated_6
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4971..6017
DNA (1047bp) protein (349aa)
Secretion protein HlyD family protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4CC13_SPHS2
secretion protein HlyD; K03543 multidrug resistance protein A
Secretion protein HlyD family protein {ECO:0000313|EMBL:ADZ77463.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
scnpilot_expt_750_p_scaffold_847_curated_7
Chryseobacterium sp. JM1, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

6020..7609
DNA (1590bp) protein (530aa)
hypothetical protein n=1 Tax=Myroides injenensis RepID=UPI000287ABC6
Uncharacterized protein {ECO:0000313|EMBL:KFF17799.1}; TaxID=1233950 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. JM1.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_847_curated_8
unknown

Not on your lists

7655..7798
DNA (144bp) protein (48aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_847_curated_9
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7829..8416
DNA (588bp) protein (196aa)
Cyclic nucleotide-binding protein n=1 Tax=Elizabethkingia meningoseptica 502 RepID=T0NMJ9_ELIME
Cyclic nucleotide-binding protein {ECO:0000313|EMBL:CDS91458.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
transcriptional regulator, crp/fnr family
scnpilot_expt_750_p_scaffold_847_curated_10
Chryseobacterium sp. CF314, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

8472..9161
DNA (690bp) protein (230aa)
Zn-dependent hydrolase, glyoxylase n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CM40_9FLAO
Zn-dependent hydrolase, glyoxylase {ECO:0000313|EMBL:EJL74286.1}; TaxID=1144316 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. CF314.;"
beta-lactamase domain-containing protein
scnpilot_expt_750_p_scaffold_847_curated_11
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9371..9841)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VJ19_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EFK59154.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_847_curated_12
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10176..10502
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EHY9_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EDM34929.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BAL39.;"
scnpilot_expt_750_p_scaffold_847_curated_13
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(10605..11591)
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QJC6_SPILD
Uncharacterized protein {ECO:0000313|EMBL:AKD04269.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_847_curated_14
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11707..12231)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EAY2_RUNSL
Uncharacterized protein {ECO:0000313|EMBL:ETZ22984.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_847_curated_15
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12311..13153)
DNA (843bp) protein (281aa)
Transcriptional regulator, AraC family n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S9Y4_PEDSD
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ADY52542.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
scnpilot_expt_750_p_scaffold_847_curated_16
unknown

Not on your lists

13269..13682
DNA (414bp) protein (138aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_847_curated_17
unknown

Not on your lists

13741..13830
DNA (90bp) protein (30aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_847_curated_18
Chryseobacterium taiwanense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13995..14399)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Photobacterium profundum RepID=Q6LJC2_PHOPR
Uncharacterized protein {ECO:0000313|EMBL:KIC62689.1}; TaxID=363331 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium taiwanense.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_847_curated_19
Chryseobacterium sp. StRB126, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14537..15325)
DNA (789bp) protein (263aa)
Phenazine biosynthesis protein PhzF family protein n=1 Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CH47_ELIME
Phenazine biosynthesis protein PhzF {ECO:0000313|EMBL:BAP32468.1}; TaxID=878220 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. StRB126.;"
phenazine biosynthesis protein PhzF family protein; K06998
scnpilot_expt_750_p_scaffold_847_curated_20
Chryseobacterium sp. P1-3, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

15655..18354
DNA (2700bp) protein (900aa)
ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
ATP-dependent DNA ligase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X4K9_FLAB3
DNA ligase {ECO:0000313|EMBL:KFF73834.1}; TaxID=1517683 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. P1-3.;"
scnpilot_expt_750_p_scaffold_847_curated_21
Chryseobacterium sp. P1-3, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

18394..18579
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W3G5_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFF73835.1}; TaxID=1517683 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. P1-3.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_847_curated_22
Triticum urartu, Triticum, Poales, commelinids, Streptophyta, Viridiplantae

Not on your lists

comp(18658..18969)
DNA (312bp) protein (104aa)
oxidoreductase n=1 Tax=Empedobacter brevis RepID=UPI00035DCB81
Uncharacterized protein {ECO:0000313|EnsemblPlants:TRIUR3_32776-P1}; TaxID=4572 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum.;" source="Triticum urartu (Red wild einkorn) (Crithodium urartu).;"
alcohol dehydrogenase/quinone reductase-like protein, MDR superfamily
scnpilot_expt_750_p_scaffold_847_curated_23
unknown

Not on your lists

19000..19293
DNA (294bp) protein (98aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_847_curated_24
unknown

Not on your lists

comp(19368..19463)
DNA (96bp) protein (32aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_847_curated_25
Chryseobacterium oranimense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

19481..20317
DNA (837bp) protein (279aa)
short-chain dehydrogenase/reductase SDR (EC:1.1.1.100)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W3H5_9FLAO
Putative oxidoreductase {ECO:0000313|EMBL:CEJ68783.1}; TaxID=1300143 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium oranimense G311.;"
scnpilot_expt_750_p_scaffold_847_curated_26
Chryseobacterium oranimense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

20417..21367
DNA (951bp) protein (317aa)
AraC family transcriptional regulator n=1 Tax=Flavobacterium sp. F52 RepID=J1KZ35_9FLAO
HTH-type transcriptional regulator ChbR {ECO:0000313|EMBL:CEJ68784.1}; TaxID=1300143 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium oranimense G311.;"
AraC family transcriptional regulator
scnpilot_expt_750_p_scaffold_847_curated_27
Flavobacterium sp. F52, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

21510..22082
DNA (573bp) protein (191aa)
Crp/Fnr family transcriptional regulator n=1 Tax=Flavobacterium sp. F52 RepID=J0RWT8_9FLAO
Crp/Fnr family transcriptional regulator {ECO:0000313|EMBL:EJG03552.1}; TaxID=1202532 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. F52.;"
Crp/Fnr family transcriptional regulator
scnpilot_expt_750_p_scaffold_847_curated_28
Chryseobacterium oranimense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

22161..22550
DNA (390bp) protein (130aa)
Endoribonuclease n=1 Tax=Flavobacterium sp. F52 RepID=J1L039_9FLAO
Putative reactive intermediate deaminase TdcF {ECO:0000313|EMBL:CEJ68786.1}; TaxID=1300143 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium oranimense G311.;"
endoribonuclease L-PSP
scnpilot_expt_750_p_scaffold_847_curated_29
Chryseobacterium sp. JM1, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

22791..23408
DNA (618bp) protein (206aa)
Oxidoreductase, 2OG-Fe(II) oxygenase family protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W5L3_9FLAO
2OG-Fe(II) oxygenase {ECO:0000313|EMBL:KFF21955.1}; TaxID=1233950 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. JM1.;"
2OG-Fe(II) oxygenase
scnpilot_expt_750_p_scaffold_847_curated_30
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

23631..26522
DNA (2892bp) protein (964aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0NQV7_9SPHI
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:CDT16326.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
multi-sensor hybrid histidine kinase
Displaying items 1-30 of 42 in total

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