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scnpilot_expt_750_p_scaffold_428_curated

Search features with annotation key words

Displaying items 1-30 of 72 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_p_scaffold_428_curated_1
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(413..1531)
DNA (1119bp) protein (373aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI00036450CF
Uncharacterized protein {ECO:0000313|EMBL:EFK56234.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_428_curated_2
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1652..2092)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W6X3_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EFK33423.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_428_curated_3
unknown

Not on your lists

2121..2312
DNA (192bp) protein (64aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_428_curated_4
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2239..3294)
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0NW32_9SPHI
Probable SecDF protein-export membrane protein {ECO:0000313|EMBL:EDM36915.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BAL39.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_428_curated_5
unknown

Not on your lists

3614..3979
DNA (366bp) protein (122aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_428_curated_6
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4275..4841
DNA (567bp) protein (189aa)
Sigma-70 region 2 n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VQN4_9SPHI
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:AIM38253.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ML3W.;"
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
scnpilot_expt_750_p_scaffold_428_curated_7
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4844..5680
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FVH2_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AIM38254.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ML3W.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_428_curated_8
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5746..6579)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VQN2_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:CDT09046.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_428_curated_9
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6601..7323)
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0MWP8_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:CDT09056.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_428_curated_10
unknown

Not on your lists

comp(7277..7369)
DNA (93bp) protein (31aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_428_curated_11
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7766..10579
DNA (2814bp) protein (938aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0NQV7_9SPHI
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:CDT16326.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
multi-sensor hybrid histidine kinase
scnpilot_expt_750_p_scaffold_428_curated_12
Bdellovibrio bacteriovorus, Bdellovibrio, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10805..11539
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0MYV7_9SPHI
short chain dehydrogenase
Putative oxidoreductase {ECO:0000313|EMBL:CAE79245.1}; TaxID=264462 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bdellovibrionaceae; Bdellovibrio.;" source="Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529; / HD100).;"
scnpilot_expt_750_p_scaffold_428_curated_13
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11715..12794)
DNA (1080bp) protein (360aa)
Stearoyl-CoA 9-desaturase {ECO:0000313|EMBL:EEI92491.1}; EC=1.14.19.1 {ECO:0000313|EMBL:EEI92491.1};; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
fatty acid desaturase; K00507 stearoyl-CoA desaturase (delta-9 desaturase) [EC:1.14.19.1]
Stearoyl-CoA 9-desaturase n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FX50_9SPHI
scnpilot_expt_750_p_scaffold_428_curated_14
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13061..14467)
DNA (1407bp) protein (469aa)
Uncharacterized protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KSB4_HALH1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE53317.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
scnpilot_expt_750_p_scaffold_428_curated_15
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14593..15891
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KSQ4_HALH1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE48018.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
scnpilot_expt_750_p_scaffold_428_curated_16
Nitritalea halalkaliphila, Nitritalea, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

15912..17009
DNA (1098bp) protein (366aa)
Alkyl hydroperoxide reductase/ thiol specific antioxidant/ mal allergen n=1 Tax=Nitritalea halalkaliphila LW7 RepID=I5BR28_9BACT
Alkyl hydroperoxide reductase/ thiol specific antioxidant/ mal allergen {ECO:0000313|EMBL:EIM72030.1}; TaxID=1189621 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Nitritalea.;" source="Nitritalea halalkaliphila LW7.;"
alkyl hydroperoxide reductase
scnpilot_expt_750_p_scaffold_428_curated_17
Chryseobacterium taiwanense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17099..18247)
DNA (1149bp) protein (383aa)
RND family efflux transporter, MFP subunit n=1 Tax=Chryseobacterium sp. CF314 RepID=J2KBR0_9FLAO
Hemolysin D {ECO:0000313|EMBL:KIC62657.1}; TaxID=363331 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium taiwanense.;"
RND family efflux transporter MFP subunit
scnpilot_expt_750_p_scaffold_428_curated_18
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18250..22593)
DNA (4344bp) protein (1448aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W186_9FLAO
CzcA family cobalt/zinc/cadmium efflux RND transporter {ECO:0000313|EMBL:CDS98000.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
CzcA family heavy metal efflux protein
scnpilot_expt_750_p_scaffold_428_curated_19
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22766..23212)
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI0003800E07
Uncharacterized protein {ECO:0000313|EMBL:CDS97992.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_428_curated_20
Sphingobacterium paucimobilis, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

23290..23766
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2IX80_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:ERJ57314.1}; TaxID=1346330 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium paucimobilis HER1398.;"
hypothetical protein; K00389 putative membrane protein
scnpilot_expt_750_p_scaffold_428_curated_21
Chryseobacterium sp. CF314, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23866..25047)
DNA (1182bp) protein (394aa)
Arabinose efflux permease family protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CPH1_9FLAO
Arabinose efflux permease family protein {ECO:0000313|EMBL:EJL75889.1}; TaxID=1144316 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. CF314.;"
major facilitator superfamily protein
scnpilot_expt_750_p_scaffold_428_curated_22
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25266..26342)
DNA (1077bp) protein (359aa)
Uncharacterized protein n=1 Tax=Elizabethkingia meningoseptica 502 RepID=T0NEN8_ELIME
Uncharacterized protein {ECO:0000313|EMBL:KGO09138.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia miricola (Chryseobacterium miricola).;"
hypothetical protein
scnpilot_expt_750_p_scaffold_428_curated_23
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26374..26751)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KVS1_SOLCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFD06694.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
scnpilot_expt_750_p_scaffold_428_curated_24
unknown

Not on your lists

27532..27864
DNA (333bp) protein (111aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_428_curated_25
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

27861..28454
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4CFN2_SPHS2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ79185.1}; Flags: Precursor;; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
scnpilot_expt_750_p_scaffold_428_curated_26
unknown

Not on your lists

28858..29019
DNA (162bp) protein (54aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_428_curated_27
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

29052..30716
DNA (1665bp) protein (555aa)
Uncharacterized protein n=2 Tax=Sphingobacterium RepID=U2H6M7_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:KEQ28201.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;"
scnpilot_expt_750_p_scaffold_428_curated_28
unknown

Not on your lists

30916..31098
DNA (183bp) protein (61aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_428_curated_29
Chryseobacterium sp. CF314, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

31202..32374
DNA (1173bp) protein (391aa)
DNA-binding domain-containing protein, AraC-type n=1 Tax=Chryseobacterium sp. CF314 RepID=J2KS86_9FLAO
DNA-binding domain-containing protein, AraC-type {ECO:0000313|EMBL:EJL75918.1}; TaxID=1144316 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. CF314.;"
AraC family transcriptional regulator
scnpilot_expt_750_p_scaffold_428_curated_30
Chryseobacterium sp. CF314, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

32622..35426
DNA (2805bp) protein (935aa)
TonB-dependent receptor n=1 Tax=Chryseobacterium sp. CF314 RepID=J2K6Q0_9FLAO
TonB-dependent receptor {ECO:0000313|EMBL:EJL75895.1}; Flags: Precursor;; TaxID=1144316 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. CF314.;"
TonB-dependent receptor
Displaying items 1-30 of 72 in total

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