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scnpilot_expt_750_p_scaffold_769_curated

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_p_scaffold_769_curated_1
unknown

Not on your lists

43..276
DNA (234bp) protein (78aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_769_curated_2
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(487..1206)
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B5687E
Uncharacterized protein {ECO:0000313|EMBL:KJS04627.1}; TaxID=1629721 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.;"
scnpilot_expt_750_p_scaffold_769_curated_3
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1367..1660
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Bacteroides uniformis dnLKV2 RepID=R9I5R2_BACUN
hypothetical protein
Lipocalin-like domain protein {ECO:0000313|EMBL:KDS50161.1}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
scnpilot_expt_750_p_scaffold_769_curated_4
unknown

Not on your lists

1693..2103
DNA (411bp) protein (137aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_769_curated_5

Not on your lists

2492..3904
DNA (1413bp) protein (471aa)
Uncharacterized protein {ECO:0000313|EMBL:AIA99601.1}; TaxID=1465630 species="Bacteria; environmental samples.;" source="uncultured bacterium contig00103(2014).;"
Uncharacterized protein id=4249722 bin=GWF2_Bacteroidetes_40_14 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes
hypothetical protein rbh
scnpilot_expt_750_p_scaffold_769_curated_6
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4079..4540)
DNA (462bp) protein (154aa)
Uncharacterized protein {ECO:0000313|EMBL:KIC91043.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
Methyltransferase id=2445184 bin=GWC2_TM7_44_17 species=Lactococcus lactis genus=Lactococcus taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
hypothetical protein
scnpilot_expt_750_p_scaffold_769_curated_7
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4795..7239
DNA (2445bp) protein (815aa)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI000304AD22
TonB-dependent receptor plug {ECO:0000313|EMBL:CDS93210.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
TonB-dependent receptor plug
scnpilot_expt_750_p_scaffold_769_curated_8
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7236..8045)
DNA (810bp) protein (270aa)
Transcriptional regulator, AraC family n=2 Tax=Flavobacterium RepID=A5FFK1_FLAJ1
Helix-turn-helix domain-containing protein {ECO:0000313|EMBL:CDS93208.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
helix-turn-helix domain-containing protein
scnpilot_expt_750_p_scaffold_769_curated_9
Sphingobacterium paucimobilis, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8335..9477)
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2J281_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:ERJ59039.1}; TaxID=1346330 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium paucimobilis HER1398.;"
alkyl hydroperoxide reductase
scnpilot_expt_750_p_scaffold_769_curated_10
Sphingobacterium paucimobilis, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9511..11145)
DNA (1635bp) protein (545aa)
carboxy-terminal processing protease; K03797 carboxyl-terminal processing protease [EC:3.4.21.102] rbh
Uncharacterized protein n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2HUV6_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:ERJ59040.1}; TaxID=1346330 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium paucimobilis HER1398.;"
scnpilot_expt_750_p_scaffold_769_curated_11
Sphingobacterium paucimobilis, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11165..13168)
DNA (2004bp) protein (668aa)
Uncharacterized protein n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2HBE3_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:ERJ59041.1}; TaxID=1346330 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium paucimobilis HER1398.;"
alkyl hydroperoxide reductase
scnpilot_expt_750_p_scaffold_769_curated_12
Sphingobacterium paucimobilis, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13180..14538)
DNA (1359bp) protein (453aa)
Uncharacterized protein n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2HU75_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:ERJ59042.1}; TaxID=1346330 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium paucimobilis HER1398.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_769_curated_13
Sphingobacterium paucimobilis, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14551..18087)
DNA (3537bp) protein (1179aa)
Uncharacterized protein n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2J8T1_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:ERJ59043.1}; TaxID=1346330 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium paucimobilis HER1398.;"
TonB-dependent receptor plug
scnpilot_expt_750_p_scaffold_769_curated_14
Sphingobacterium paucimobilis, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18116..19144)
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2J288_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:ERJ59044.1}; TaxID=1346330 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium paucimobilis HER1398.;"
anti-FecI sigma factor FecR
scnpilot_expt_750_p_scaffold_769_curated_15
Sphingobacterium paucimobilis, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19317..19913)
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2HUV9_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:ERJ59045.1}; TaxID=1346330 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium paucimobilis HER1398.;"
sigma-70 family RNA polymerase sigma factor
scnpilot_expt_750_p_scaffold_769_curated_16
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20281..20709
DNA (429bp) protein (143aa)
hydroxyisourate hydrolase; K07127 5-hydroxyisourate hydrolase [EC:3.5.2.17]
5-hydroxyisourate hydrolase {ECO:0000256|RuleBase:RU361270}; Short=HIU hydrolase {ECO:0000256|RuleBase:RU361270};; Short=HIUHase {ECO:0000256|RuleBase:RU361270};; EC=3.5.2.17 {ECO:0000256|RuleBase:RU361270};; Flags: Precursor;; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
5-hydroxyisourate hydrolase n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SBS7_PEDSD
scnpilot_expt_750_p_scaffold_769_curated_17
unknown

Not on your lists

20754..20930
DNA (177bp) protein (59aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_769_curated_18
Galbibacter marinus, Galbibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

21019..21942
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Galbibacter marinus RepID=K2PZ55_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EKF53901.1}; TaxID=555500 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Galbibacter.;" source="Galbibacter marinus.;"
NAD dependent epimerase/dehydratase family protein
scnpilot_expt_750_p_scaffold_769_curated_19
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22117..22680
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:98 RepID=R7NUW2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KKB55696.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordonii MS-1.;"
Cyclic nucleotide-binding domain.
scnpilot_expt_750_p_scaffold_769_curated_20
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22758..23912
DNA (1155bp) protein (385aa)
Membrane protein n=1 Tax=Bacteroides sp. CAG:98 RepID=R7NV11_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KKB52625.1}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. HGS0025.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_769_curated_21
Chryseobacterium sp. JM1, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

24226..24555
DNA (330bp) protein (110aa)
Uncharacterized protein n=2 Tax=Acinetobacter RepID=L9MJ84_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KFF18896.1}; TaxID=1233950 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. JM1.;"
scnpilot_expt_750_p_scaffold_769_curated_22
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24761..25327)
DNA (567bp) protein (189aa)
Fasciclin domain protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W2M8_9FLAO
Fasciclin domain protein {ECO:0000313|EMBL:EFK34589.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
beta-Ig-H3/fasciclin
scnpilot_expt_750_p_scaffold_769_curated_23
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

25603..26001
DNA (399bp) protein (133aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YHJ6_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:CDT08633.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
scnpilot_expt_750_p_scaffold_769_curated_24
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

26185..28341
DNA (2157bp) protein (719aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0MQR6_9SPHI
Putative TonB-dependent siderophore receptor {ECO:0000313|EMBL:CDT08645.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
TonB-dependent siderophore receptor; K02014 iron complex outermembrane recepter protein
scnpilot_expt_750_p_scaffold_769_curated_25
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28717..29166)
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003638753
Uncharacterized protein {ECO:0000313|EMBL:KIA94751.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_769_curated_26
Cellulophaga lytica, Cellulophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

29751..30287
DNA (537bp) protein (179aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Cellulophaga lytica (strain ATCC 23178 / DSM 7489 / JCM 8516 / NBRC 14961 / NCIMB 1423 / VKM B-1433 / Cy l20) RepID=F0RCT0_CELLC
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADY30812.1}; TaxID=867900 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Cellulophaga.;" source="Cellulophaga lytica (strain ATCC 23178 / DSM 7489 / JCM 8516 / NBRC; 14961 / NCIMB 1423 / VKM B-1433 / Cy l20).;"
scnpilot_expt_750_p_scaffold_769_curated_27
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

30361..31341
DNA (981bp) protein (327aa)
Putative anti-sigma factor n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GXA8_9SPHI
Putative anti-sigma factor {ECO:0000313|EMBL:EOR96293.1}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
anti-FecI sigma factor FecR
scnpilot_expt_750_p_scaffold_769_curated_28
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

31427..34933
DNA (3507bp) protein (1169aa)
TonB-dependent receptor plug n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0J4F0_CYCMS
Membrane protein {ECO:0000313|EMBL:AIM38474.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ML3W.;"
TonB-dependent receptor plug
scnpilot_expt_750_p_scaffold_769_curated_29
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

34944..36935
DNA (1992bp) protein (664aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0NWJ7_9SPHI
Starch-binding protein {ECO:0000313|EMBL:AIM38473.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ML3W.;"
RagB/SusD domain-containing protein
scnpilot_expt_750_p_scaffold_769_curated_30
Indibacter alkaliphilus, Indibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

37021..38523
DNA (1503bp) protein (501aa)
Alpha-L-fucosidase {ECO:0000313|EMBL:EOZ91529.1}; EC=3.2.1.51 {ECO:0000313|EMBL:EOZ91529.1};; TaxID=1189612 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae.;" source="Indibacter alkaliphilus LW1.;"
Alpha-L-fucosidase n=1 Tax=Indibacter alkaliphilus LW1 RepID=S2CY73_9BACT
alpha-L-fucosidase
Displaying items 1-30 of 33 in total

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