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scnpilot_solids2_trim150_scaffold_3004

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_3004_1
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..338)
-----------------
DNA (336bp)
protein (112aa)
ATP synthase I chain n=1 Tax=Rhodanobacter denitrificans RepID=M4NIR4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:GAN45042.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
ATP synthase I chain
scnpilot_solids2_trim150_scaffold_3004_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(617..1003)
-----------------
DNA (387bp)
protein (129aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2K5_9GAMM
Phasin protein
Phasin protein {ECO:0000313|EMBL:AGG90841.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_3004_3
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1167..1550)
-----------------
DNA (384bp)
protein (128aa)
6-carboxy-5,6,7,8-tetrahydropterin synthase {ECO:0000256|PIRNR:PIRNR006113}; EC=4.-.-.- {ECO:0000256|PIRNR:PIRNR006113};; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
ygcM; 6-pyruvoyl tetrahydrobiopterin synthase; K01737 6-pyruvoyl tetrahydrobiopterin synthase [EC:4.2.3.12]
6-carboxy-5,6,7,8-tetrahydropterin synthase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VLS1_9GAMM
scnpilot_solids2_trim150_scaffold_3004_4
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

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comp(1579..2589)
-----------------
DNA (1011bp)
protein (337aa)
putative threonine dehydratase; K01754 threonine dehydratase [EC:4.3.1.19]
Putative threonine dehydratase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I9C5_CALAS
Putative threonine dehydratase {ECO:0000313|EMBL:BAM01863.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
scnpilot_solids2_trim150_scaffold_3004_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2822..4246
-----------------
DNA (1425bp)
protein (475aa)
glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49)
Glucose-6-phosphate 1-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497}; Short=G6PD {ECO:0000256|HAMAP-Rule:MF_00966};; EC=1.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Glucose-6-phosphate 1-dehydrogenase n=1 Tax=Rhodanobacter denitrificans RepID=M4NU33_9GAMM
scnpilot_solids2_trim150_scaffold_3004_6
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

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4240..4950
-----------------
DNA (711bp)
protein (237aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NLM0_9GAMM
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
scnpilot_solids2_trim150_scaffold_3004_7
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4983..6086
-----------------
DNA (1104bp)
protein (368aa)
transaldolase (EC:2.2.1.2)
Transaldolase n=1 Tax=Rhodanobacter denitrificans RepID=M4NMT8_9GAMM
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_3004_8
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6083..7768
-----------------
DNA (1686bp)
protein (562aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Glucose-6-phosphate isomerase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WAH7_9GAMM
glucose-6-phosphate isomerase
scnpilot_solids2_trim150_scaffold_3004_9
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7765..7992
-----------------
DNA (228bp)
protein (76aa)
Phosphoglucomutase {ECO:0000313|EMBL:EIL96467.1}; EC=5.4.2.2 {ECO:0000313|EMBL:EIL96467.1};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Phosphoglucomutase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WAH6_9GAMM
phosphoglucomutase, alpha-D-glucose phosphate-specific
Displaying 9 items

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