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scnpilot_solids2_trim150_scaffold_3015

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_3015_1
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..320
-----------------
DNA (318bp)
protein (106aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000347619B
Amidohydrolase 3 {ECO:0000313|EMBL:EIL95423.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
amidohydrolase 3; K07047
scnpilot_solids2_trim150_scaffold_3015_2
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(402..722)
-----------------
DNA (321bp)
protein (107aa)
hypothetical protein n=1 Tax=Leifsonia sp. 109 RepID=UPI00036AE1D6
Uncharacterized protein {ECO:0000313|EMBL:EIM03459.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
methyl-accepting chemotaxis protein; K03406 methyl-accepting chemotaxis protein
scnpilot_solids2_trim150_scaffold_3015_3
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(805..1719)
-----------------
DNA (915bp)
protein (305aa)
Cation diffusion facilitator family transporter n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRF4_9GAMM
cation diffusion facilitator family transporter
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_3015_4
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1807..2241)
-----------------
DNA (435bp)
protein (145aa)
MerC mercury resistance protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WLG3_9GAMM
MerC mercury resistance protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_3015_5
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2358..2873)
-----------------
DNA (516bp)
protein (172aa)
Fe2+/Zn2+ uptake regulation protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WLG2_9GAMM
Fe2+/Zn2+ uptake regulation protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_3015_6
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3219..4622)
-----------------
DNA (1404bp)
protein (468aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
glutamyl-tRNA synthetase (EC:6.1.1.17)
Glutamate--tRNA ligase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VK27_9GAMM
scnpilot_solids2_trim150_scaffold_3015_7
Ralstonia mannitolilytica, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4690..5070
-----------------
DNA (381bp)
protein (127aa)
Uncharacterized protein n=3 Tax=Ralstonia RepID=C6BGZ5_RALP1
Uncharacterized protein {ECO:0000313|EMBL:AJW45122.1}; TaxID=105219 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia mannitolilytica.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_3015_8
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5138..6007)
-----------------
DNA (870bp)
protein (290aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395}; Short=ACCase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_01395};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VK31_9GAMM
acetyl-CoA carboxylase carboxyltransferase subunit alpha
scnpilot_solids2_trim150_scaffold_3015_9
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6119..6919)
-----------------
DNA (801bp)
protein (267aa)
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|RuleBase:RU000601}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|RuleBase:RU000601};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
tryptophan synthase, alpha chain (EC:4.2.1.20)
Tryptophan synthase alpha chain n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRE3_9GAMM
scnpilot_solids2_trim150_scaffold_3015_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6916..7962)
-----------------
DNA (1047bp)
protein (349aa)
tryptophan synthase, beta chain (EC:4.2.1.20)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Tryptophan synthase beta chain n=2 Tax=Rhodanobacter denitrificans RepID=M4NCT4_9GAMM
Displaying 10 items

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